MELO3C020061T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C020061T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNADH-cytochrome b5 reductase 2
Locationchr10 : 11235839 .. 11236051 (+)
Sequence length213
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCTCAGAAAAGGAGGAACTCTAAAAGTTTCTCTTCAAAGTTGGCAAGGCGGAAGCAGGAGAGTGTAGAAAATTTAGATGAACTGAAAAATGTAGAAGATGTTGGTACGACTTCCAGTTTGTTGGATATGATGAATGAGAAGCCTCAAGAGTCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAG

mRNA sequence

ATGCCTCCTCAGAAAAGGAGGAACTCTAAAAGTTTCTCTTCAAAGTTGGCAAGGCGGAAGCAGGAGAGTGTAGAAAATTTAGATGAACTGAAAAATGTAGAAGATGTTGGTACGACTTCCAGTTTGTTGGATATGATGAATGAGAAGCCTCAAGAGTCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAG

Coding sequence (CDS)

ATGCCTCCTCAGAAAAGGAGGAACTCTAAAAGTTTCTCTTCAAAGTTGGCAAGGCGGAAGCAGGAGAGTGTAGAAAATTTAGATGAACTGAAAAATGTAGAAGATGTTGGTACGACTTCCAGTTTGTTGGATATGATGAATGAGAAGCCTCAAGAGTCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAG

Protein sequence

MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGK
Homology
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BLAST of MELO3C020061T1 vs. NCBI nr
Match: gi|659114029|ref|XP_008456875.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo])

HSP 1 Score: 58.2 bits (139), Expect = 7.0e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 1 

Query: 45 MMNEKPQESRVIFVLDNAPLHKGLVGK 72
          MMNEKPQESRVIFVLDNAPLHKGLVGK
Sbjct: 1  MMNEKPQESRVIFVLDNAPLHKGLVGK 27

The following BLAST results are available for this feature:
BLAST of MELO3C020061T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114029|ref|XP_008456875.1|7.0e-06100.00PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C020061MELO3C020061gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C020061T1MELO3C020061T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C020061T1.cds1MELO3C020061T1.cds1CDS