MELO3C020061 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020061
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNADH-cytochrome b5 reductase 2
Locationchr10 : 11235839 .. 11236051 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCTCAGAAAAGGAGGAACTCTAAAAGTTTCTCTTCAAAGTTGGCAAGGCGGAAGCAGGAGAGTGTAGAAAATTTAGATGAACTGAAAAATGTAGAAGATGTTGGTACGACTTCCAGTTTGTTGGATATGATGAATGAGAAGCCTCAAGAGTCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAG

mRNA sequence

ATGCCTCCTCAGAAAAGGAGGAACTCTAAAAGTTTCTCTTCAAAGTTGGCAAGGCGGAAGCAGGAGAGTGTAGAAAATTTAGATGAACTGAAAAATGTAGAAGATGTTGGTACGACTTCCAGTTTGTTGGATATGATGAATGAGAAGCCTCAAGAGTCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAG

Coding sequence (CDS)

ATGCCTCCTCAGAAAAGGAGGAACTCTAAAAGTTTCTCTTCAAAGTTGGCAAGGCGGAAGCAGGAGAGTGTAGAAAATTTAGATGAACTGAAAAATGTAGAAGATGTTGGTACGACTTCCAGTTTGTTGGATATGATGAATGAGAAGCCTCAAGAGTCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAG

Protein sequence

MPPQKRRNSKSFSSKLARRKQESVENLDELKNVEDVGTTSSLLDMMNEKPQESRVIFVLDNAPLHKGLVGK
Homology
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BLAST of MELO3C020061 vs. NCBI nr
Match: gi|659114029|ref|XP_008456875.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo])

HSP 1 Score: 58.2 bits (139), Expect = 7.0e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 1 

Query: 45 MMNEKPQESRVIFVLDNAPLHKGLVGK 72
          MMNEKPQESRVIFVLDNAPLHKGLVGK
Sbjct: 1  MMNEKPQESRVIFVLDNAPLHKGLVGK 27

The following BLAST results are available for this feature:
BLAST of MELO3C020061 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114029|ref|XP_008456875.1|7.0e-06100.00PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020061T1MELO3C020061T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020061Cucurbita pepo (Zucchini)cpemeB388
MELO3C020061Bottle gourd (USVL1VR-Ls)lsimeB084
MELO3C020061Cucumber (Gy14) v2cgybmeB313
MELO3C020061Cucumber (Chinese Long) v3cucmeB373
MELO3C020061Watermelon (97103) v2mewmbB049
MELO3C020061Cucurbita maxima (Rimu)cmameB664
MELO3C020061Cucurbita moschata (Rifu)cmomeB657
MELO3C020061Wild cucumber (PI 183967)cpimeB373
MELO3C020061Cucumber (Chinese Long) v2cumeB376
MELO3C020061Watermelon (Charleston Gray)mewcgB045
MELO3C020061Watermelon (97103) v1mewmB079