MELO3C019338T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C019338T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP-binding cassette sub-family A member 9
Locationchr11 : 11994927 .. 11995291 (+)
Sequence length285
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCATAGAAGCAAAAGATGTCTAGGATTAGGGTTGAAACATATTAAATCAAACAAGGATGATCCAATTGTGATCGAGGATAATGCAAAGGTATATTTCTTAGTTTTTGAATGTGTATTTTAAATGGTATAAATCGTTAAACAAAAATATAATATGTATATATATGGTAGGAGGAAGTAAGATATGAAGAACCAGTTCAATACGAACCACTGCAAACTATATATCTAGAAGATTATGAACAAGAGTTAAGAGGACCTATAGGTACAAAGATTATGGTGTACCAGGATCAGAAGTTTGTGAAACCGAATGTGGACTTTGAAACACCGGAAGCAAAAATGGCAACACATGACAAAGAAAAATAG

mRNA sequence

ATGGTTCATAGAAGCAAAAGATGTCTAGGATTAGGGTTGAAACATATTAAATCAAACAAGGATGATCCAATTGTGATCGAGGATAATGCAAAGGAGGAAGTAAGATATGAAGAACCAGTTCAATACGAACCACTGCAAACTATATATCTAGAAGATTATGAACAAGAGTTAAGAGGACCTATAGGTACAAAGATTATGGTGTACCAGGATCAGAAGTTTGTGAAACCGAATGTGGACTTTGAAACACCGGAAGCAAAAATGGCAACACATGACAAAGAAAAATAG

Coding sequence (CDS)

ATGGTTCATAGAAGCAAAAGATGTCTAGGATTAGGGTTGAAACATATTAAATCAAACAAGGATGATCCAATTGTGATCGAGGATAATGCAAAGGAGGAAGTAAGATATGAAGAACCAGTTCAATACGAACCACTGCAAACTATATATCTAGAAGATTATGAACAAGAGTTAAGAGGACCTATAGGTACAAAGATTATGGTGTACCAGGATCAGAAGTTTGTGAAACCGAATGTGGACTTTGAAACACCGGAAGCAAAAATGGCAACACATGACAAAGAAAAATAG

Protein sequence

MVHRSKRCLGLGLKHIKSNKDDPIVIEDNAKEEVRYEEPVQYEPLQTIYLEDYEQELRGPIGTKIMVYQDQKFVKPNVDFETPEAKMATHDKEK*
Homology
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BLAST of MELO3C019338T1 vs. NCBI nr
Match: gi|659129589|ref|XP_008464749.1| (PREDICTED: uncharacterized protein LOC103502558 isoform X2 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-07
Identity = 29/51 (56.86%), Postives = 41/51 (80.39%), Query Frame = 1 

Query: 13  LKHIKSNKDDPIVIEDNAKEEVRYEEPVQYEPLQTIYLEDYEQELRGPIGT 64
           LK IKS+KD+ I+IEDN +E++R EEP+ Y+P+QTIY +D E+EL+G   T
Sbjct: 110 LKKIKSSKDNSILIEDNEEEDIRNEEPLDYQPIQTIYPKDDEEELQGTTDT 160

The following BLAST results are available for this feature:
BLAST of MELO3C019338T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129589|ref|XP_008464749.1|1.3e-0756.86PREDICTED: uncharacterized protein LOC103502558 isoform X2 [Cucumis melo][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C019338MELO3C019338gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C019338T1MELO3C019338T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C019338T1.cds1MELO3C019338T1.cds1CDS
MELO3C019338T1.cds2MELO3C019338T1.cds2CDS