MELO3C019338 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019338
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP-binding cassette sub-family A member 9
Locationchr11 : 11994927 .. 11995291 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCATAGAAGCAAAAGATGTCTAGGATTAGGGTTGAAACATATTAAATCAAACAAGGATGATCCAATTGTGATCGAGGATAATGCAAAGGTATATTTCTTAGTTTTTGAATGTGTATTTTAAATGGTATAAATCGTTAAACAAAAATATAATATGTATATATATGGTAGGAGGAAGTAAGATATGAAGAACCAGTTCAATACGAACCACTGCAAACTATATATCTAGAAGATTATGAACAAGAGTTAAGAGGACCTATAGGTACAAAGATTATGGTGTACCAGGATCAGAAGTTTGTGAAACCGAATGTGGACTTTGAAACACCGGAAGCAAAAATGGCAACACATGACAAAGAAAAATAG

mRNA sequence

ATGGTTCATAGAAGCAAAAGATGTCTAGGATTAGGGTTGAAACATATTAAATCAAACAAGGATGATCCAATTGTGATCGAGGATAATGCAAAGGAGGAAGTAAGATATGAAGAACCAGTTCAATACGAACCACTGCAAACTATATATCTAGAAGATTATGAACAAGAGTTAAGAGGACCTATAGGTACAAAGATTATGGTGTACCAGGATCAGAAGTTTGTGAAACCGAATGTGGACTTTGAAACACCGGAAGCAAAAATGGCAACACATGACAAAGAAAAATAG

Coding sequence (CDS)

ATGGTTCATAGAAGCAAAAGATGTCTAGGATTAGGGTTGAAACATATTAAATCAAACAAGGATGATCCAATTGTGATCGAGGATAATGCAAAGGAGGAAGTAAGATATGAAGAACCAGTTCAATACGAACCACTGCAAACTATATATCTAGAAGATTATGAACAAGAGTTAAGAGGACCTATAGGTACAAAGATTATGGTGTACCAGGATCAGAAGTTTGTGAAACCGAATGTGGACTTTGAAACACCGGAAGCAAAAATGGCAACACATGACAAAGAAAAATAG

Protein sequence

MVHRSKRCLGLGLKHIKSNKDDPIVIEDNAKEEVRYEEPVQYEPLQTIYLEDYEQELRGPIGTKIMVYQDQKFVKPNVDFETPEAKMATHDKEK*
Homology
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BLAST of MELO3C019338 vs. NCBI nr
Match: gi|659129589|ref|XP_008464749.1| (PREDICTED: uncharacterized protein LOC103502558 isoform X2 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-07
Identity = 29/51 (56.86%), Postives = 41/51 (80.39%), Query Frame = 1 

Query: 13  LKHIKSNKDDPIVIEDNAKEEVRYEEPVQYEPLQTIYLEDYEQELRGPIGT 64
           LK IKS+KD+ I+IEDN +E++R EEP+ Y+P+QTIY +D E+EL+G   T
Sbjct: 110 LKKIKSSKDNSILIEDNEEEDIRNEEPLDYQPIQTIYPKDDEEELQGTTDT 160

The following BLAST results are available for this feature:
BLAST of MELO3C019338 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129589|ref|XP_008464749.1|1.3e-0756.86PREDICTED: uncharacterized protein LOC103502558 isoform X2 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019338T1MELO3C019338T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019338Bottle gourd (USVL1VR-Ls)lsimeB053
MELO3C019338Bottle gourd (USVL1VR-Ls)lsimeB088
MELO3C019338Cucumber (Gy14) v2cgybmeB083
MELO3C019338Silver-seed gourdcarmeB0799
MELO3C019338Cucumber (Chinese Long) v3cucmeB103
MELO3C019338Cucumber (Chinese Long) v3cucmeB460
MELO3C019338Watermelon (97103) v2mewmbB094
MELO3C019338Watermelon (97103) v2mewmbB111
MELO3C019338Wax gourdmewgoB107
MELO3C019338Wax gourdmewgoB126
MELO3C019338Cucumber (Gy14) v1cgymeB015
MELO3C019338Cucumber (Gy14) v1cgymeB099
MELO3C019338Cucurbita maxima (Rimu)cmameB451
MELO3C019338Cucurbita maxima (Rimu)cmameB502
MELO3C019338Cucurbita maxima (Rimu)cmameB533
MELO3C019338Cucurbita moschata (Rifu)cmomeB443
MELO3C019338Cucurbita moschata (Rifu)cmomeB482
MELO3C019338Cucurbita moschata (Rifu)cmomeB523
MELO3C019338Cucurbita moschata (Rifu)cmomeB580
MELO3C019338Wild cucumber (PI 183967)cpimeB096
MELO3C019338Wild cucumber (PI 183967)cpimeB446
MELO3C019338Cucumber (Chinese Long) v2cumeB097
MELO3C019338Cucumber (Chinese Long) v2cumeB456
MELO3C019338Watermelon (Charleston Gray)mewcgB087
MELO3C019338Watermelon (Charleston Gray)mewcgB092
MELO3C019338Watermelon (97103) v1mewmB102
MELO3C019338Watermelon (97103) v1mewmB110
MELO3C019338Watermelon (97103) v1mewmB131
MELO3C019338Cucurbita pepo (Zucchini)cpemeB214
MELO3C019338Cucurbita pepo (Zucchini)cpemeB257
MELO3C019338Cucurbita pepo (Zucchini)cpemeB667