MELO3C017742.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C017742.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	nuclear transport factor 2-like
Location	chr07 : 26728220 .. 26730808 (-)
Sequence length	1319

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACCCTCGGCCAACGCTGTCGTCTCCAGTTGTTTCTCTCCTAAACCCCCCCGGCGGAAGAAATTTGCTCTCTCCTACCTCGGCGAATTTCGACGTTACGCGAATGGATCCCGACACGCTGGCTAAAGCATTCGTCGATCATTATTATTCCACTTTCGACGCCAATCGAGCCGGTCTTGGTAATCTCTACCAAGAAAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCTACTAATATCGTCGCCAAGCTCACTAGTCTACCCTTCCAGCAGTGCAAGCACAACGTTAGCACCATCGATTGCCAGCCTTCTGGTCCTTCTGGTGGCATGCTCGTCTTCGTCAGCGGCAATCTTCAACTCGTTGGCGAACAACATGCTCTCAAATTCAGTCAGGTAATGCGTTGTTCCTTTTAATCGGGATGTTTCTTGATTTGTTTCTAATTTTTGAGCCTTGTGGTTATTGATTTTGGATTTATGGATTTGATCTTTGTTGGATCTAGTGTTGTTTTGGAGTTAGCTGATTGATTTTTGTTATTATAGAGTTGGACTGTGTTGATTGAATTCGCGTTCTGATTCTCTAATTTATGTGGTTCTGCTGTTTAATATCATTATTGGGATCTGTGTAGTTTGCGTTTTCCTTGTTCTTGTAGATCTAGGGGCTTTCGTCGGAATTATATGTATTATAACGGGACACCGAATCTGTAGATCAAGGTTGAGACTGTGATGTGTTTATGTTGTTGCTTCAGTATGTCTCAGATGATTTATGTTTTTGCTTGGGGTTATTGTTTCTGAAAATAAATATTGTGGAACGAGTTCGTCCGGTCAATGGTCATCTTTTTGATTTATCAGCATGGGTGTAGTGAGAATGAGATAACAAAAGGAACGGTTTTTTGATTATTTAACTCAAAAAGTTTATGCTGAACTGATAATTTGTTTAAGTTCATGGTTGCCTTTTTATTTACGGGGATTTCTGAGGTGACATGACACCTGCTCTTCTCTTCAAACAAAAGAATGCTACTGAGTTCGTTTCATGTGTCTTTTATTCCAAGTGAATTCGCTTGTTACAATTTCCTTGGCTTATTGTAGTGATACGTTTGAAGATCATGATCTATATTCTCATTGCAGTTTTTTTACCTTTAATATATCATTTTATGGGAATACAAATGTATGTTCGTCATTTATTTCCTCTAAATTCAAATCATTTTCAAATTCCATGTGGGTTGGAATTTTTTTTAAAGTAACGAGTCGTATTGTTAAAAAAATCTACTTTTTTTTTTTTTATCTTTTATATTCTATGAATTGCTTTTCTGAATATTGATAACCATTGAGAATGTGATACATAGGCATCGCTTTTCTTGTTTGTACTTTGTATTGTTATGAAACAAATTCAATTATGTCAAGTTATGCTTGGAAGAATTGAGAATTTGTTACAACTACAGTATGTCCTAACTAATTGAATTGCTTTGGTGACAACTTTTCTTTTCTTGTTGTTAGTTGTGGTTCTATATTTTTAAACTTTGACTTGTATACTAATGCTATAGTTGCTTAGGCCAACGTCTTAGACCATTTGTTCTATAGGTTGTACTAGCTTAGCTGTGAGTTTCTAAAGTATATCTTGTAATTGATTTTTTCTAACCAAAATGTATTTACTATGTTCATTCAGATGTTCCATTTGATGCCAACCCCACAAGGAAGCTTCTTTGTGCAGAACGACATTTTCCGATTGAACTATGCCTGAAGTTGAGAGTAATCCATGGTGTATTGGGAGACCTGAAATGTCAGGTTATTCAACCAGTTTGTTTATCACCGTTCAGTTTTTTAGACATTTCAAATTGGAACTTGGATTATATTTTATTGTGCTTATGCTTCAATGTGTGCCTATGCAAAGTCGAATTTCTTGGTTGTCATTGAGAATTGATGAAATAGATACTTTCTTCAAATTCAAGTGATTTGCTCAATACTCCCTGCATTCTATCCAAAAAAATGTGAGTTGTACAGTTCGCTATTTATTATAAATTCCAGCCTTAAACTTCCAAAACAAAAAGCAGTACCGGCGTAGACACGCCCGACAAAATACAGGGGTTCAATATAATTTCTTCCCTTAAACAACTAATTTAGATAGATACAAAGTTGTACAAAGCTGTTCAAATGTTTAGTTGTGGCTATAAAAACAAAACCAAAGAGCTGCACATCCAAAGGAACACAACTTAGGTGATGGATGTTGATGAAGCTATGAATCATCATCGAAGTCGGGTAAGCTGACGTGAGGTATGGCAGGTATATTAAGCTGAGGCAATTCAGTAGCTTCAATCTGATGTTGTATTGCTGAAGTTGTCTTTCTTTTAAGAATTGTTCCTAGGGATTTGAATGGATTGCTCAACAACCCATCTCTGAGTTTCAAAATGAAAGACACTTCAGAGATTTGCCAAGCAACAGTGAGGATAATCATTGCTGAAACAAGGCAGTGAGTTACGAAATTTTGCTTCTTCACTTCTTTTAGCTCTTTCACTATCTCCTCTGTTTTAACCTTGATTTCACTTCTTTCCACATTATTTTCTCCTTCAGCCTCTAAGTTTGTCTCA

mRNA sequence

GAACCCTCGGCCAACGCTGTCGTCTCCAGTTGTTTCTCTCCTAAACCCCCCCGGCGGAAGAAATTTGCTCTCTCCTACCTCGGCGAATTTCGACGTTACGCGAATGGATCCCGACACGCTGGCTAAAGCATTCGTCGATCATTATTATTCCACTTTCGACGCCAATCGAGCCGGTCTTGGTAATCTCTACCAAGAAAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCTACTAATATCGTCGCCAAGCTCACTAGTCTACCCTTCCAGCAGTGCAAGCACAACGTTAGCACCATCGATTGCCAGCCTTCTGGTCCTTCTGGTGGCATGCTCGTCTTCGTCAGCGGCAATCTTCAACTCGTTGGCGAACAACATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAAGGAAGCTTCTTTGTGCAGAACGACATTTTCCGATTGAACTATGCCTGAAGTTGAGAGTAATCCATGGTGTATTGGGAGACCTGAAATGTCAGGTTATTCAACCAGTTTGTTTATCACCGTTCAGTTTTTTAGACATTTCAAATTGGAACTTGGATTATATTTTATTGTGCTTATGCTTCAATGTGTGCCTATGCAAAGTCGAATTTCTTGGTTGTCATTGAGAATTGATGAAATAGATACTTTCTTCAAATTCAAGTGATTTGCTCAATACTCCCTGCATTCTATCCAAAAAAATGTGAGTTGTACAGTTCGCTATTTATTATAAATTCCAGCCTTAAACTTCCAAAACAAAAAGCAGTACCGGCGTAGACACGCCCGACAAAATACAGGGGTTCAATATAATTTCTTCCCTTAAACAACTAATTTAGATAGATACAAAGTTGTACAAAGCTGTTCAAATGTTTAGTTGTGGCTATAAAAACAAAACCAAAGAGCTGCACATCCAAAGGAACACAACTTAGGTGATGGATGTTGATGAAGCTATGAATCATCATCGAAGTCGGGTAAGCTGACGTGAGGTATGGCAGGTATATTAAGCTGAGGCAATTCAGTAGCTTCAATCTGATGTTGTATTGCTGAAGTTGTCTTTCTTTTAAGAATTGTTCCTAGGGATTTGAATGGATTGCTCAACAACCCATCTCTGAGTTTCAAAATGAAAGACACTTCAGAGATTTGCCAAGCAACAGTGAGGATAATCATTGCTGAAACAAGGCAGTGAGTTACGAAATTTTGCTTCTTCACTTCTTTTAGCTCTTTCACTATCTCCTCTGTTTTAACCTTGATTTCACTTCTTTCCACATTATTTTCTCCTTCAGCCTCTAAGTTTGTCTCA

Coding sequence (CDS)

AACCCTCGGCCAACGCTGTCGTCTCCAGTTGTTTCTCTCCTAAACCCCCCCGGCGGAAGAAATTTGCTCTCTCCTACCTCGGCGAATTTCGACGTTACGCGAATGGATCCCGACACGCTGGCTAAAGCATTCGTCGATCATTATTATTCCACTTTCGACGCCAATCGAGCCGGTCTTGGTAATCTCTACCAAGAAAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCTACTAATATCGTCGCCAAGCTCACTAGTCTACCCTTCCAGCAGTGCAAGCACAACGTTAGCACCATCGATTGCCAGCCTTCTGGTCCTTCTGGTGGCATGCTCGTCTTCGTCAGCGGCAATCTTCAACTCGTTGGCGAACAACATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAAGGAAGCTTCTTTGTGCAGAACGACATTTTCCGATTGAACTATGCCTGA

Protein sequence

NPRPTLSSPVVSLLNPPGGRNLLSPTSANFDVTRMDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA

Homology

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BLAST of MELO3C017742.2.1 vs. NCBI nr
Match: XP_008454013.1 (PREDICTED: nuclear transport factor 2-like [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 9.8e-65
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC
Sbjct: 1   MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL
Sbjct: 61  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MELO3C017742.2.1 vs. NCBI nr
Match: KGN53044.1 (hypothetical protein Csa_4G012400 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 4.9e-64
Identity = 125/153 (81.70%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 8   SPVVSLLNPPGGRNLLSPTS---ANFDVTRMDPDTLAKAFVDHYYSTFDANRAGLGNLYQ 67
           SP   ++   GG   LS TS    NF++TRMDPD +AKAFVDHYYSTFDANRA LGNLYQ
Sbjct: 21  SPKPGVVPKHGGTYFLSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQ 80

Query: 68  ENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVG 127
           +NSMLTFEGQKIQGS NIVAKL+SLPFQQCKH+VST+DCQPSGP+GGMLVFVSGNLQL G
Sbjct: 81  DNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAG 140

Query: 128 EQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA 158
           EQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA
Sbjct: 141 EQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA 173

[Close]

BLAST of MELO3C017742.2.1 vs. NCBI nr
Match: XP_004152114.2 (PREDICTED: nuclear transport factor 2-like [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 4.3e-60
Identity = 113/123 (91.87%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPD +AKAFVDHYYSTFDANRA LGNLYQ+NSMLTFEGQKIQGS NIVAKL+SLPFQQC
Sbjct: 1   MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           KH+VST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQMFHLMPTPQGSFFVQNDIFRL
Sbjct: 61  KHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 123

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BLAST of MELO3C017742.2.1 vs. NCBI nr
Match: XP_022979987.1 (nuclear transport factor 2B [Cucurbita maxima])

HSP 1 Score: 236.5 bits (602), Expect = 6.2e-59
Identity = 111/123 (90.24%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPD +AKAFVDHYYSTFDANRAGL NLYQ+NSMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVDHYYSTFDANRAGLANLYQDNSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           +H+VST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQMFHLMPTPQGSF+V NDIFRL
Sbjct: 61  QHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MELO3C017742.2.1 vs. NCBI nr
Match: XP_022932693.1 (nuclear transport factor 2B-like [Cucurbita moschata])

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 110/123 (89.43%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPD +AKAFVDHYYSTFDANR+GL NLYQ+NSMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 3   MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 62

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           +H+VST+DCQPSGPSGG+LVFVSGNLQL GEQHALKFSQMFHLMPTPQGSF+V NDIFRL
Sbjct: 63  QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 122

Query: 155 NYA 158
           NYA
Sbjct: 123 NYA 125

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BLAST of MELO3C017742.2.1 vs. TAIR10
Match: AT1G27310.1 (nuclear transport factor 2A)

HSP 1 Score: 212.6 bits (540), Expect = 1.7e-55
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPD +AKAFV+HYYSTFDANR GL +LYQE SMLTFEGQKIQGS NIVAKLT LPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTGLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           KHN++T+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQMFHL+ + QG+++V NDIFRL
Sbjct: 61  KHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 122

[Close]

BLAST of MELO3C017742.2.1 vs. TAIR10
Match: AT1G27970.2 (nuclear transport factor 2B)

HSP 1 Score: 210.7 bits (535), Expect = 6.6e-55
Identity = 97/121 (80.17%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 32  VTRMDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPF 91
           +++MDPD ++KAFV+HYYSTFD NR GL  LYQE SMLTFEGQKIQG  +IVAKLTSLPF
Sbjct: 1   MSQMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPF 60

Query: 92  QQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDI 151
           QQCKH++ST+DCQPSGP+ GMLVFVSGNLQL GE+HALKFSQMFHLMPTPQGSF+V NDI
Sbjct: 61  QQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDI 120

Query: 152 F 153
           F
Sbjct: 121 F 121

[Close]

BLAST of MELO3C017742.2.1 vs. TAIR10
Match: AT1G11570.2 (NTF2-like)

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-36
Identity = 73/122 (59.84%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 38  DTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHN 97
           + +A AFV+HYY  FD +R+ L +LY   S+LTFEGQ I G  NI  KL  LPF QC H 
Sbjct: 10  EEVASAFVNHYYHLFDNDRSSLSSLYNPTSLLTFEGQTIYGVDNISNKLKQLPFDQCHHL 69

Query: 98  VSTIDCQPS---GPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 157
           +ST+D QPS   G  GG+LVFVSG++QL GE H L+FSQ FHL+P  QGSFFVQN++FRL
Sbjct: 70  ISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDHPLRFSQTFHLIPVLQGSFFVQNEMFRL 129

[Close]

BLAST of MELO3C017742.2.1 vs. Swiss-Prot
Match: sp|Q9C7F5|NTF2B_ARATH (Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.8e-57
Identity = 102/126 (80.95%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 32  VTRMDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPF 91
           +++MDPD ++KAFV+HYYSTFD NR GL  LYQE SMLTFEGQKIQG  +IVAKLTSLPF
Sbjct: 1   MSQMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPF 60

Query: 92  QQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDI 151
           QQCKH++ST+DCQPSGP+ GMLVFVSGNLQL GE+HALKFSQMFHLMPTPQGSF+V NDI
Sbjct: 61  QQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDI 120

Query: 152 FRLNYA 158
           FRLNYA
Sbjct: 121 FRLNYA 126

[Close]

BLAST of MELO3C017742.2.1 vs. Swiss-Prot
Match: sp|Q9FZK4|NTF2A_ARATH (Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.1e-54
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPD +AKAFV+HYYSTFDANR GL +LYQE SMLTFEGQKIQGS NIVAKLT LPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTGLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           KHN++T+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQMFHL+ + QG+++V NDIFRL
Sbjct: 61  KHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 122

[Close]

BLAST of MELO3C017742.2.1 vs. Swiss-Prot
Match: sp|Q9XJ54|NTF2_ORYSJ (Nuclear transport factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NTF2 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-40
Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MD D +AKAFV+HYY TFD NR  L +LYQ+ SMLTFEGQ+  G+  I  KL SLPF QC
Sbjct: 1   MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
            H+++T+DCQPSGP GGMLVFVSG+L+   ++H LKFSQMF L+P   G+F+VQND+FRL
Sbjct: 61  HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPA-GGNFYVQNDMFRL 120

Query: 155 NY 157
           NY
Sbjct: 121 NY 121

[Close]

BLAST of MELO3C017742.2.1 vs. Swiss-Prot
Match: sp|Q75AA5|NTF2_ASHGO (Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=NTF2 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.2e-31
Identity = 64/123 (52.03%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MD   LA+ F + YY+ FD +R+ LGNLY++ SMLTFE  ++QG+ +IV KL SLPFQ+ 
Sbjct: 3   MDFSALAQQFTEFYYNQFDTDRSQLGNLYRDQSMLTFETSQLQGAKDIVEKLVSLPFQKV 62

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           +H ++T+D QP+ P+G +LV ++G+L +  EQ+A +FSQ+FHLMP    S++V NDIFRL
Sbjct: 63  QHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMP-EGNSYYVFNDIFRL 122

Query: 155 NYA 158
           NY+
Sbjct: 123 NYS 124

[Close]

BLAST of MELO3C017742.2.1 vs. Swiss-Prot
Match: sp|Q96VN3|NTF2_EMENI (Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ntf2 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.8e-31
Identity = 66/121 (54.55%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 36  DPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCK 95
           D  ++A+ FV  YY TFD NRAGL  LY+++SMLTFE   IQG   I+ KLTSLPFQ+ +
Sbjct: 3   DFQSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQ 62

Query: 96  HNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLN 155
           H VST+D QPSG  GG+LV V+G L +  E++ + ++Q F LMP   GS+FV ND+FRL 
Sbjct: 63  HQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLI 122

Query: 156 Y 157
           Y
Sbjct: 123 Y 123

[Close]

BLAST of MELO3C017742.2.1 vs. TrEMBL
Match: tr|A0A1S3BXM4|A0A1S3BXM4_CUCME (nuclear transport factor 2-like OS=Cucumis melo OX=3656 GN=LOC103494563 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 6.5e-65
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC
Sbjct: 1   MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL
Sbjct: 61  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MELO3C017742.2.1 vs. TrEMBL
Match: tr|A0A0A0KW20|A0A0A0KW20_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012400 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.2e-64
Identity = 125/153 (81.70%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 8   SPVVSLLNPPGGRNLLSPTS---ANFDVTRMDPDTLAKAFVDHYYSTFDANRAGLGNLYQ 67
           SP   ++   GG   LS TS    NF++TRMDPD +AKAFVDHYYSTFDANRA LGNLYQ
Sbjct: 21  SPKPGVVPKHGGTYFLSLTSLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQ 80

Query: 68  ENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVG 127
           +NSMLTFEGQKIQGS NIVAKL+SLPFQQCKH+VST+DCQPSGP+GGMLVFVSGNLQL G
Sbjct: 81  DNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAG 140

Query: 128 EQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA 158
           EQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA
Sbjct: 141 EQHALKFSQMFHLMPTPQGSFFVQNDIFRLNYA 173

[Close]

BLAST of MELO3C017742.2.1 vs. TrEMBL
Match: tr|A0A2I0L8M2|A0A2I0L8M2_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002493 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.5e-58
Identity = 109/123 (88.62%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPD LAKAFV+HYY+TFDANRAGL NLYQE SMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDQLAKAFVEHYYTTFDANRAGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           +H++ST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQMFHLMPTPQGSF+V NDIFRL
Sbjct: 61  QHSISTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MELO3C017742.2.1 vs. TrEMBL
Match: tr|A0A2G9HPG1|A0A2G9HPG1_9LAMI (Nuclear transport factor 2 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07913 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.9e-58
Identity = 109/123 (88.62%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPD +AKAFV+HYYSTFDANRAGL NLYQE SMLTFEGQKI GS NIVAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRAGLANLYQEGSMLTFEGQKIMGSQNIVAKLTSLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           +H +ST+DCQPSGP+GGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSF+V NDIFRL
Sbjct: 61  QHQISTVDCQPSGPAGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MELO3C017742.2.1 vs. TrEMBL
Match: tr|A0A2J6KP11|A0A2J6KP11_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X2440 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57
Identity = 107/123 (86.99%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 35  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQC 94
           MDPD L+KAFVDHYYSTFD NRAGL NLYQ+ SMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDALSKAFVDHYYSTFDNNRAGLANLYQDTSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 95  KHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGSFFVQNDIFRL 154
           KH+++T+DCQPSGP+GGMLVFVSGNLQL GEQHAL+FSQMFHLMPTPQGSF+V NDIFRL
Sbjct: 61  KHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALRFSQMFHLMPTPQGSFYVYNDIFRL 120

Query: 155 NYA 158
           NYA
Sbjct: 121 NYA 123

The following BLAST results are available for this feature:

BLAST of MELO3C017742.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454013.1	9.8e-65	100.00	PREDICTED: nuclear transport factor 2-like [Cucumis melo]	[more]
KGN53044.1	4.9e-64	81.70	hypothetical protein Csa_4G012400 [Cucumis sativus]	[more]
XP_004152114.2	4.3e-60	91.87	PREDICTED: nuclear transport factor 2-like [Cucumis sativus]	[more]
XP_022979987.1	6.2e-59	90.24	nuclear transport factor 2B [Cucurbita maxima]	[more]
XP_022932693.1	1.8e-58	89.43	nuclear transport factor 2B-like [Cucurbita moschata]	[more]

BLAST of MELO3C017742.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27310.1	1.7e-55	82.11	nuclear transport factor 2A	[more]
AT1G27970.2	6.6e-55	80.17	nuclear transport factor 2B	[more]
AT1G11570.2	2.3e-36	59.84	NTF2-like	[more]

BLAST of MELO3C017742.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C7F5\|NTF2B_ARATH	8.8e-57	80.95	Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1	[more]
sp\|Q9FZK4\|NTF2A_ARATH	3.1e-54	82.11	Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1	[more]
sp\|Q9XJ54\|NTF2_ORYSJ	2.0e-40	63.93	Nuclear transport factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NTF2 PE=2...	[more]
sp\|Q75AA5\|NTF2_ASHGO	2.2e-31	52.03	Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / ...	[more]
sp\|Q96VN3\|NTF2_EMENI	4.8e-31	54.55	Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /...	[more]

BLAST of MELO3C017742.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BXM4\|A0A1S3BXM4_CUCME	6.5e-65	100.00	nuclear transport factor 2-like OS=Cucumis melo OX=3656 GN=LOC103494563 PE=4 SV=...	[more]
tr\|A0A0A0KW20\|A0A0A0KW20_CUCSA	3.2e-64	81.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012400 PE=4 SV=1	[more]
tr\|A0A2I0L8M2\|A0A2I0L8M2_PUNGR	4.5e-58	88.62	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002493 PE=4 SV=1	[more]
tr\|A0A2G9HPG1\|A0A2G9HPG1_9LAMI	5.9e-58	88.62	Nuclear transport factor 2 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_0791...	[more]
tr\|A0A2J6KP11\|A0A2J6KP11_LACSA	1.7e-57	86.99	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X2440 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR032710	NTF2-like_dom_sf
IPR018222	Nuclear_transport_factor_2_euk
IPR002075	NTF2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C017742.2	MELO3C017742.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C017742.2.1	MELO3C017742.2.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C017742.2.1.five_prime_UTR.1	MELO3C017742.2.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C017742.2.1.exon.2	MELO3C017742.2.1.exon.2	exon
MELO3C017742.2.1.exon.1	MELO3C017742.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C017742.2.1.CDS.2	MELO3C017742.2.1.CDS.2	CDS
MELO3C017742.2.1.CDS.1	MELO3C017742.2.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C017742.2.1.three_prime_UTR.1	MELO3C017742.2.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002075	Nuclear transport factor 2	PFAM	PF02136	NTF2	coord: 41..154 e-value: 1.1E-36 score: 125.9
None	No IPR available	GENE3D	G3DSA:3.10.450.50		coord: 33..157 e-value: 4.8E-43 score: 148.3
None	No IPR available	PANTHER	PTHR12612	NUCLEAR TRANSPORT FACTOR 2	coord: 35..156
None	No IPR available	PANTHER	PTHR12612:SF12	F17L21.10	coord: 35..156
IPR018222	Nuclear transport factor 2, eukaryote	PROSITE	PS50177	NTF2_DOMAIN	coord: 40..154 score: 33.928
IPR018222	Nuclear transport factor 2, eukaryote	CDD	cd00780	NTF2	coord: 36..156 e-value: 3.92266E-48 score: 152.822
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	SSF54427	NTF2-like	coord: 37..155