MELO3C016059.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCATCAAAACCACAATTTTCATATCTCTTCTCGCCCTACTCTTCTTCTACGAATATCTATACCCACTTCCTCCCCCGGTTCGCGGCGCCCATTCCAATTCCGTTACCGGGGTGCTGCACCGGAAAATCCTTCAGACGGCGGCTCATAAGACTGCAGGTGACAATGTCGAGTCCTCTTCAGAACGGAAGATGAATAACGTTCATATGAAAATAGGTACAAGCGGCGGTGGTGGCGGTGGCCGCGGTGGTGGTGGTGGTGGTGGCCGCGGTGGCCGCGGTGGTGGCGGTGGCCGCGATAGATCGTCGAAGCGGACAAACCTGGGAGGAGGTGGAACTGGCCACCATAAATCGGCGGCGAACCGGAGCCTGGTCGCGTCTTTTGGCGTTGGATTTCTTCTCTTCATTTTGGGATTGTTCATGTGA ATGGCTGCCATCAAAACCACAATTTTCATATCTCTTCTCGCCCTACTCTTCTTCTACGAATATCTATACCCACTTCCTCCCCCGGTTCGCGGCGCCCATTCCAATTCCGTTACCGGGGTGCTGCACCGGAAAATCCTTCAGACGGCGGCTCATAAGACTGCAGGTGACAATGTCGAGTCCTCTTCAGAACGGAAGATGAATAACGTTCATATGAAAATAGGTACAAGCGGCGGTGGTGGCGGTGGCCGCGGTGGTGGTGGTGGTGGTGGCCGCGGTGGCCGCGGTGGTGGCGGTGGCCGCGATAGATCGTCGAAGCGGACAAACCTGGGAGGAGGTGGAACTGGCCACCATAAATCGGCGGCGAACCGGAGCCTGGTCGCGTCTTTTGGCGTTGGATTTCTTCTCTTCATTTTGGGATTGTTCATGTGA ATGGCTGCCATCAAAACCACAATTTTCATATCTCTTCTCGCCCTACTCTTCTTCTACGAATATCTATACCCACTTCCTCCCCCGGTTCGCGGCGCCCATTCCAATTCCGTTACCGGGGTGCTGCACCGGAAAATCCTTCAGACGGCGGCTCATAAGACTGCAGGTGACAATGTCGAGTCCTCTTCAGAACGGAAGATGAATAACGTTCATATGAAAATAGGTACAAGCGGCGGTGGTGGCGGTGGCCGCGGTGGTGGTGGTGGTGGTGGCCGCGGTGGCCGCGGTGGTGGCGGTGGCCGCGATAGATCGTCGAAGCGGACAAACCTGGGAGGAGGTGGAACTGGCCACCATAAATCGGCGGCGAACCGGAGCCTGGTCGCGTCTTTTGGCGTTGGATTTCTTCTCTTCATTTTGGGATTGTTCATGTGA MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVESSSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSAANRSLVASFGVGFLLFILGLFM
BLAST of MELO3C016059.2.1 vs. NCBI nr
Match: XP_008451666.1 (PREDICTED: protein no-on-transient A-like [Cucumis melo]) HSP 1 Score: 168.3 bits (425), Expect = 1.9e-38 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of MELO3C016059.2.1 vs. NCBI nr
Match: XP_008451651.1 (PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]) HSP 1 Score: 57.0 bits (136), Expect = 6.1e-05 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of MELO3C016059.2.1 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_7G394060 [Cucumis sativus]) HSP 1 Score: 56.6 bits (135), Expect = 7.9e-05 Identity = 64/142 (45.07%), Postives = 70/142 (49.30%), Query Frame = 0
BLAST of MELO3C016059.2.1 vs. TrEMBL
Match: tr|A0A1S3BRF6|A0A1S3BRF6_CUCME (protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of MELO3C016059.2.1 vs. TrEMBL
Match: tr|A0A1S3BT53|A0A1S3BT53_CUCME (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.0e-05 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of MELO3C016059.2.1 vs. TrEMBL
Match: tr|A0A0A0KAQ7|A0A0A0KAQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.2e-05 Identity = 64/142 (45.07%), Postives = 70/142 (49.30%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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