MELO3C015984.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGGATAGCCTTCTCATTCTTCCTCCAGCGGAGCTCCTCTGTGAAACCCATGGCCGCCACCGCTGCCTGCTCCTCTCTCAGCTCCATTCGAGTAATAGGTTCTTCTTTCTTTCTCCTTGTTGATGCCAGTTCCCATTGAAATTGGGTTTTCTTTTAGTTTTTACTTTATCCTTGTAATTTAGGTATAGGATCATCTCCTTTGATTCCCAACTATGAAAACTCAAATTCTTTCTATTGCTTCCCCTGCTCTCGATTTTACTGTTACTGTTCCTTTCTTCTGACTGGAGGGTTCTGACCTGTTCAGTTGGATAAGGAATATTGAGACTTTGAAACTTTGTAGCAGTGAATTAGAATAAATATTGAGACTTGACTATTGTCACACCGTTTCTGGTCATCTCTACACAAGTTCTTGGTCCTAATGTGCATCCAAAATTTTATTGGATTTTTACTCTAAAGTAGTCTTGTAACATCTAACAAAGGTTAAATTGAGGTTAATATTGCAATTTCTGAAAGAATAGTGGTATGTTTGAAACTAAGTTCGAATTCAAAGAATATTTTTTATAATTTAGCCGTTTAAATTTTGTTCTGAGTTTTTGTCATTAGGACCATTGTTACTATATGATTAGGGCATAATGAGACAAAGGATGGAGTGATGAAATAGATTTTTAGATTGACTTTTTAAGTCTTTAAGAACAATTTTTAAACATCTAGAAAAGTTAATGGGAATAAGTCTTTAGTTTAAGATGTATTTTACTTCTTTCAGTCATTCTATCGAACATTTTGACCATATCACTGTCCTATTCTCCACTGTCGTGCGTAATCAGCATTTAACTATTGTTATACATTACAAAAGGTCAGTAGAATCACATATATTTAAAATTACTTTCAAATACTTAAAGTATCTAAAAAGTCATTCTAGACATGCACTTAGTCTGTGAATTGCATCCATTTGCAAAATGTTTAGATTTATTACCTTGTTTCCTTGGACAGAGAGGCTTCAAGTACCATCCTCAAAGAAATCCAAACTACAAATTCCAAGCAATCAAATGTAGCTCATCTTTGTTGGGTTCTTTTACCTCTTCCAAGATTCTTCCGTCACTGGCCTATGTCATCCCTCCATTAAAGCCAGCTGCTGCTTACGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCAATGGCTGCCTCTGATTTTGTGAACAGTATGACCTTGGCTGACCTCGACCCAGGAACGGCAAAGCTTGCGATCAGCTTTCTGGGGCCGTCTCTCTCGGTGTTTTCGTTTTTGTTTATTGCTAGAATAGTAATGTCTTGGTATCCCAAGTTGCCAGTGGGGAAGTTTCCATATGTTATAGCTTATGCCCCCACTGAACCACTTCTAATTGCAACAAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGACGTAACACCAGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGGCTGCTTGTCCTCCTTTCTCAACAAGTCAGCTAAATCTTGATGAGAATGCTTCAGAGAAACATTCTTTTGTTTTTTAGTTCTGTATATGCAACTGATCTTCTTAGCTGAGCCTCTTTGGTTCCAAAAGGCAAAGGATGTGAGAACTTGAAATTCTTAATGAAAGAAAATTTTCCTCATCCTAGAGAGTGTAATCAGTTCAGCTTCAGATTGGTTTTGAGCTAAAACTGACTTGACCTTGTGTCGTTTTGAGAAGATTGAACGTTGTTTGAAAATTTGAT AGGGATAGCCTTCTCATTCTTCCTCCAGCGGAGCTCCTCTGTGAAACCCATGGCCGCCACCGCTGCCTGCTCCTCTCTCAGCTCCATTCGAGTAATAGGTTCTTCTTTCTTTCTCCTTGTTGATGCCAGTTCCCATTGAAATTGGGTTTTCTTTTAGTTTTTACTTTATCCTTGTAATTTAGGTATAGGATCATCTCCTTTGATTCCCAACTATGAAAACTCAAATTCTTTCTATTGCTTCCCCTGCTCTCGATTTTACTGTTACTGTTCCTTTCTTCTGACTGGAGGGTTCTGACCTGTTCAGTTGGATAAGGAATATTGAGACTTTGAAACTTTGTAGCAGTGAATTAGAATAAATATTGAGACTTGACTATTGTCACACCGTTTCTGGTCATCTCTACACAAGTTCTTGGTCCTAATGTGCATCCAAAATTTTATTGGATTTTTACTCTAAAGTAGTCTTGTAACATCTAACAAAGGTTAAATTGAGGTTAATATTGCAATTTCTGAAAGAATAGTGGTATGTTTGAAACTAAGTTCGAATTCAAAGAATATTTTTTATAATTTAGCCGTTTAAATTTTGTTCTGAGTTTTTGTCATTAGGACCATTGTTACTATATGATTAGGGCATAATGAGACAAAGGATGGAGTGATGAAATAGATTTTTAGATTGACTTTTTAAGTCTTTAAGAACAATTTTTAAACATCTAGAAAAGTTAATGGGAATAAGTCTTTAGTTTAAGATGTATTTTACTTCTTTCAGTCATTCTATCGAACATTTTGACCATATCACTGTCCTATTCTCCACTGTCGTGCGTAATCAGCATTTAACTATTGTTATACATTACAAAAGGTCAGTAGAATCACATATATTTAAAATTACTTTCAAATACTTAAAGTATCTAAAAAGTCATTCTAGACATGCACTTAGTCTGTGAATTGCATCCATTTGCAAAATGTTTAGATTTATTACCTTGTTTCCTTGGACAGAGAGGCTTCAAGTACCATCCTCAAAGAAATCCAAACTACAAATTCCAAGCAATCAAATGTAGCTCATCTTTGTTGGGTTCTTTTACCTCTTCCAAGATTCTTCCGTCACTGGCCTATGTCATCCCTCCATTAAAGCCAGCTGCTGCTTACGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCAATGGCTGCCTCTGATTTTGTGAACAGTATGACCTTGGCTGACCTCGACCCAGGAACGGCAAAGCTTGCGATCAGCTTTCTGGGGCCGTCTCTCTCGGTGTTTTCGTTTTTGTTTATTGCTAGAATAGTAATGTCTTGGTATCCCAAGTTGCCAGTGGGGAAGTTTCCATATGTTATAGCTTATGCCCCCACTGAACCACTTCTAATTGCAACAAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGACGTAACACCAGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGGCTGCTTGTCCTCCTTTCTCAACAAGTCAGCTAAATCTTGATGAGAATGCTTCAGAGAAACATTCTTTTGTTTTTTAGTTCTGTATATGCAACTGATCTTCTTAGCTGAGCCTCTTTGGTTCCAAAAGGCAAAGGATGTGAGAACTTGAAATTCTTAATGAAAGAAAATTTTCCTCATCCTAGAGAGTGTAATCAGTTCAGCTTCAGATTGGTTTTGAGCTAAAACTGACTTGACCTTGTGTCGTTTTGAGAAGATTGAACGTTGTTTGAAAATTTGAT ATGCACTTAGTCTGTGAATTGCATCCATTTGCAAAATGTTTAGATTTATTACCTTGTTTCCTTGGACAGAGAGGCTTCAAGTACCATCCTCAAAGAAATCCAAACTACAAATTCCAAGCAATCAAATGTAGCTCATCTTTGTTGGGTTCTTTTACCTCTTCCAAGATTCTTCCGTCACTGGCCTATGTCATCCCTCCATTAAAGCCAGCTGCTGCTTACGAAGCTGCAAGGACTATCCCCTTTGCCTTGCAAGATGCATCAATGGCTGCCTCTGATTTTGTGAACAGTATGACCTTGGCTGACCTCGACCCAGGAACGGCAAAGCTTGCGATCAGCTTTCTGGGGCCGTCTCTCTCGGTGTTTTCGTTTTTGTTTATTGCTAGAATAGTAATGTCTTGGTATCCCAAGTTGCCAGTGGGGAAGTTTCCATATGTTATAGCTTATGCCCCCACTGAACCACTTCTAATTGCAACAAGGAAGGTGATCCCTCCTCTCGGCGGAGTTGACGTAACACCAGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGGCTGCTTGTCCTCCTTTCTCAACAAGTCAGCTAA MHLVCELHPFAKCLDLLPCFLGQRGFKYHPQRNPNYKFQAIKCSSSLLGSFTSSKILPSLAYVIPPLKPAAAYEAARTIPFALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKFPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
BLAST of MELO3C015984.2.1 vs. NCBI nr
Match: XP_008451549.1 (PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic [Cucumis melo]) HSP 1 Score: 345.5 bits (885), Expect = 1.2e-91 Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. NCBI nr
Match: XP_004136017.2 (PREDICTED: uncharacterized protein LOC101206020 isoform X2 [Cucumis sativus]) HSP 1 Score: 333.6 bits (854), Expect = 4.7e-88 Identity = 172/179 (96.09%), Postives = 175/179 (97.77%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. NCBI nr
Match: XP_004136016.2 (PREDICTED: uncharacterized protein LOC101206020 isoform X1 [Cucumis sativus] >KGN44957.1 hypothetical protein Csa_7G398190 [Cucumis sativus]) HSP 1 Score: 333.2 bits (853), Expect = 6.2e-88 Identity = 172/178 (96.63%), Postives = 174/178 (97.75%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. NCBI nr
Match: XP_022953720.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic [Cucurbita moschata]) HSP 1 Score: 294.7 bits (753), Expect = 2.4e-76 Identity = 154/179 (86.03%), Postives = 161/179 (89.94%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. NCBI nr
Match: XP_023548988.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 293.5 bits (750), Expect = 5.4e-76 Identity = 154/179 (86.03%), Postives = 159/179 (88.83%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. TAIR10
Match: AT5G36120.1 (cofactor assembly, complex C (B6F)) HSP 1 Score: 178.3 bits (451), Expect = 4.6e-45 Identity = 93/126 (73.81%), Postives = 106/126 (84.13%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. TAIR10
Match: AT3G07430.1 (YGGT family protein) HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04 Identity = 40/156 (25.64%), Postives = 73/156 (46.79%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. TAIR10
Match: AT4G27990.1 (YGGT family protein) HSP 1 Score: 42.0 bits (97), Expect = 5.2e-04 Identity = 22/75 (29.33%), Postives = 42/75 (56.00%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. Swiss-Prot
Match: sp|Q8RWM7|CCB3_ARATH (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB3 PE=1 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 8.3e-44 Identity = 93/126 (73.81%), Postives = 106/126 (84.13%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. TrEMBL
Match: tr|A0A1S3BSI7|A0A1S3BSI7_CUCME (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492796 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 8.0e-92 Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. TrEMBL
Match: tr|A0A0A0K9A7|A0A0A0K9A7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398190 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 4.1e-88 Identity = 172/178 (96.63%), Postives = 174/178 (97.75%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. TrEMBL
Match: tr|B9T162|B9T162_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0190480 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.1e-48 Identity = 107/171 (62.57%), Postives = 131/171 (76.61%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. TrEMBL
Match: tr|I1NH75|I1NH75_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_20G172300 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47 Identity = 111/182 (60.99%), Postives = 129/182 (70.88%), Query Frame = 0
BLAST of MELO3C015984.2.1 vs. TrEMBL
Match: tr|I1LDA6|I1LDA6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100793885 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47 Identity = 111/182 (60.99%), Postives = 129/182 (70.88%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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