MELO3C013627T1 (mRNA) Melon (DHL92) v3.5.1

NameMELO3C013627T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionBasic helix-loop-helix DNA-binding superfamily protein
Locationchr11 : 18457169 .. 18457698 (+)
Sequence length420
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCTCTCTACTCCAAATTGAATTCCCTTCTCCCATCCCATCACTCAAATGTTTGTTCATTATTCTTTTTCTCTCTCTTTCTCTTTTCTTTTCTTTTCTTTTCTTTTCTCCATATATTATTACATTATCTATTGGTCCTTCTTCACTAAACCTTTTGTAGGATCAGTTGCCACGGACAGTTACAGACCAGATAGAGGCAGCAATAAATTACATCAAATCATTAGAGATTAAGCTGAAACAGGATGAGGAGAAGAAGGAGAGATATTTAAGAAGATCCAAAATTGCATCGTCCTCGACGGCATCCTCTTCGTCATACTCGGCATTGTCGATAAGCCAGAATAGGAATGTACCTGAATTGAAAATTAAAGAGATGGGCTCTGCTGTGGAGGTTGTTTTAAAGACTGGGTTGGAGGATCGCTCAATGTTTTATGAGACTATTCGTATCCTTAATGAGGAACGAGCTGAGATCATCAATGTCAGTTATTCTCTTCTTGATGACACAATCCTATATTCACTCCATGCTGAG

mRNA sequence

ATGAAATCTCTCTACTCCAAATTGAATTCCCTTCTCCCATCCCATCACTCAAATGATCAGTTGCCACGGACAGTTACAGACCAGATAGAGGCAGCAATAAATTACATCAAATCATTAGAGATTAAGCTGAAACAGGATGAGGAGAAGAAGGAGAGATATTTAAGAAGATCCAAAATTGCATCGTCCTCGACGGCATCCTCTTCGTCATACTCGGCATTGTCGATAAGCCAGAATAGGAATGTACCTGAATTGAAAATTAAAGAGATGGGCTCTGCTGTGGAGGTTGTTTTAAAGACTGGGTTGGAGGATCGCTCAATGTTTTATGAGACTATTCGTATCCTTAATGAGGAACGAGCTGAGATCATCAATGTCAGTTATTCTCTTCTTGATGACACAATCCTATATTCACTCCATGCTGAG

Coding sequence (CDS)

ATGAAATCTCTCTACTCCAAATTGAATTCCCTTCTCCCATCCCATCACTCAAATGATCAGTTGCCACGGACAGTTACAGACCAGATAGAGGCAGCAATAAATTACATCAAATCATTAGAGATTAAGCTGAAACAGGATGAGGAGAAGAAGGAGAGATATTTAAGAAGATCCAAAATTGCATCGTCCTCGACGGCATCCTCTTCGTCATACTCGGCATTGTCGATAAGCCAGAATAGGAATGTACCTGAATTGAAAATTAAAGAGATGGGCTCTGCTGTGGAGGTTGTTTTAAAGACTGGGTTGGAGGATCGCTCAATGTTTTATGAGACTATTCGTATCCTTAATGAGGAACGAGCTGAGATCATCAATGTCAGTTATTCTCTTCTTGATGACACAATCCTATATTCACTCCATGCTGAG

Protein sequence

MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAEIINVSYSLLDDTILYSLHAE
BLAST of MELO3C013627T1 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 40/143 (27.97%), Postives = 72/143 (50.35%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKE--RYLRRSK 60
           M SLY+ L SLLP H    +  R+ +DQ+  A+NYIK L+ K+K+   +++    L R  
Sbjct: 17  MASLYASLRSLLPLHFIKGK--RSTSDQVNEAVNYIKYLQRKIKELSVRRDDLMVLSRGS 76

Query: 61  IASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTG-LEDRSMFYETIRILNEE 120
           +  SS         +   +N  V    +++    VE++L +     +  F   +++L+E 
Sbjct: 77  LLGSSNGDFKEDVEMISGKNHVV----VRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEY 136

Query: 121 RAEIINVSYSLLDDTILYSLHAE 141
              ++N   S++DD ++Y++ AE
Sbjct: 137 GLCLLNSISSIVDDRLVYTIQAE 153

BLAST of MELO3C013627T1 vs. TrEMBL
Match: A0A061E482_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_008127 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-25
Identity = 66/140 (47.14%), Postives = 100/140 (71.43%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS+LNSLLP H S +  P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +  
Sbjct: 36  MKNLYSRLNSLLPRHTSKE--PLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKRSH 95

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
             +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE A+
Sbjct: 96  RCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEGAQ 155

Query: 121 IINVSYSLLDDTILYSLHAE 141
           ++N ++S+L +TI++ +HAE
Sbjct: 156 VLNANFSVLGNTIVHIVHAE 168

BLAST of MELO3C013627T1 vs. TrEMBL
Match: A0A061E322_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 OS=Theobroma cacao GN=TCM_008127 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-25
Identity = 66/140 (47.14%), Postives = 100/140 (71.43%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS+LNSLLP H S +  P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +  
Sbjct: 36  MKNLYSRLNSLLPRHTSKE--PLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKRSH 95

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
             +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE A+
Sbjct: 96  RCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEGAQ 155

Query: 121 IINVSYSLLDDTILYSLHAE 141
           ++N ++S+L +TI++ +HAE
Sbjct: 156 VLNANFSVLGNTIVHIVHAE 168

BLAST of MELO3C013627T1 vs. TrEMBL
Match: A0A061EAX8_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_008127 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-25
Identity = 67/142 (47.18%), Postives = 100/142 (70.42%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSND--QLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSK 60
           MK+LYS+LNSLLP H S    Q P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +
Sbjct: 36  MKNLYSRLNSLLPRHTSKWILQEPLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKR 95

Query: 61  IASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEER 120
               +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE 
Sbjct: 96  SHRCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEG 155

Query: 121 AEIINVSYSLLDDTILYSLHAE 141
           A+++N ++S+L +TI++ +HAE
Sbjct: 156 AQVLNANFSVLGNTIVHIVHAE 172

BLAST of MELO3C013627T1 vs. TrEMBL
Match: V4UE19_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-23
Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS L SLLP+  S ++L  ++ DQ++ AINYIK LE KLK+ ++KKE    R +  
Sbjct: 59  MKNLYSTLKSLLPNQPSKEEL--SLPDQVDEAINYIKMLETKLKECKKKKESLQGRER-- 118

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
           S +  S  + + L  S +   PE++I EMGS +EV+L +G++D+ +FY+ IRIL+++ AE
Sbjct: 119 SHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDDQFIFYDVIRILHQDGAE 178

Query: 121 IINVSYSLLDDTILYSLHAE 141
           I+N ++S++ +TI + +HAE
Sbjct: 179 ILNANFSVVGNTIFHVIHAE 194

BLAST of MELO3C013627T1 vs. TrEMBL
Match: V4U3N5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-23
Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS L SLLP+  S ++L  ++ DQ++ AINYIK LE KLK+ ++KKE    R +  
Sbjct: 59  MKNLYSTLKSLLPNQPSKEEL--SLPDQVDEAINYIKMLETKLKECKKKKESLQGRER-- 118

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
           S +  S  + + L  S +   PE++I EMGS +EV+L +G++D+ +FY+ IRIL+++ AE
Sbjct: 119 SHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDDQFIFYDVIRILHQDGAE 178

Query: 121 IINVSYSLLDDTILYSLHAE 141
           I+N ++S++ +TI + +HAE
Sbjct: 179 ILNANFSVVGNTIFHVIHAE 194

BLAST of MELO3C013627T1 vs. TAIR10
Match: AT4G20970.1 (AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23
Identity = 58/142 (40.85%), Postives = 90/142 (63.38%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MKSLYS+L SLLP H S +  P T+ DQ++ A NYIK L++ +++  E+K   +  + + 
Sbjct: 27  MKSLYSELISLLPHHSSTE--PLTLPDQLDEAANYIKKLQVNVEKKRERKRNLVATTTLE 86

Query: 61  S-SSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEE-R 120
             +S  SSS  S++ +S  R +P+++I+E GS   + L T LE + MF E IR+L EE  
Sbjct: 87  KLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKFMFCEIIRVLTEELG 146

Query: 121 AEIINVSYSLLDDTILYSLHAE 141
           AEI +  YS++DD + ++LH +
Sbjct: 147 AEITHAGYSIVDDAVFHTLHCK 166

BLAST of MELO3C013627T1 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 40/143 (27.97%), Postives = 72/143 (50.35%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKE--RYLRRSK 60
           M SLY+ L SLLP H    +  R+ +DQ+  A+NYIK L+ K+K+   +++    L R  
Sbjct: 17  MASLYASLRSLLPLHFIKGK--RSTSDQVNEAVNYIKYLQRKIKELSVRRDDLMVLSRGS 76

Query: 61  IASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTG-LEDRSMFYETIRILNEE 120
           +  SS         +   +N  V    +++    VE++L +     +  F   +++L+E 
Sbjct: 77  LLGSSNGDFKEDVEMISGKNHVV----VRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEY 136

Query: 121 RAEIINVSYSLLDDTILYSLHAE 141
              ++N   S++DD ++Y++ AE
Sbjct: 137 GLCLLNSISSIVDDRLVYTIQAE 153

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|590690815|ref|XP_007043611.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-25
Identity = 66/140 (47.14%), Postives = 100/140 (71.43%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS+LNSLLP H S +  P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +  
Sbjct: 36  MKNLYSRLNSLLPRHTSKE--PLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKRSH 95

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
             +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE A+
Sbjct: 96  RCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEGAQ 155

Query: 121 IINVSYSLLDDTILYSLHAE 141
           ++N ++S+L +TI++ +HAE
Sbjct: 156 VLNANFSVLGNTIVHIVHAE 168

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|590690822|ref|XP_007043613.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 [Theobroma cacao])

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-25
Identity = 66/140 (47.14%), Postives = 100/140 (71.43%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS+LNSLLP H S +  P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +  
Sbjct: 36  MKNLYSRLNSLLPRHTSKE--PLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKRSH 95

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
             +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE A+
Sbjct: 96  RCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEGAQ 155

Query: 121 IINVSYSLLDDTILYSLHAE 141
           ++N ++S+L +TI++ +HAE
Sbjct: 156 VLNANFSVLGNTIVHIVHAE 168

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|590690818|ref|XP_007043612.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-24
Identity = 67/142 (47.18%), Postives = 100/142 (70.42%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSND--QLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSK 60
           MK+LYS+LNSLLP H S    Q P ++ DQI+ A+NYI+SL+ +LK+  EKKE  + R +
Sbjct: 36  MKNLYSRLNSLLPRHTSKWILQEPLSLPDQIDEAVNYIQSLQTRLKESREKKESLMGRKR 95

Query: 61  IASSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEER 120
               +TA+++  +A+S S     PE+ I E  SA+EVVL TG + + MFYE IRIL+EE 
Sbjct: 96  SHRCTTATAAEAAAVSKS-----PEISINETDSAMEVVLMTGQDCQFMFYEMIRILHEEG 155

Query: 121 AEIINVSYSLLDDTILYSLHAE 141
           A+++N ++S+L +TI++ +HAE
Sbjct: 156 AQVLNANFSVLGNTIVHIVHAE 172

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|567909957|ref|XP_006447292.1| (hypothetical protein CICLE_v10016466mg [Citrus clementina])

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-23
Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS L SLLP+  S ++L  ++ DQ++ AINYIK LE KLK+ ++KKE    R +  
Sbjct: 59  MKNLYSTLKSLLPNQPSKEEL--SLPDQVDEAINYIKMLETKLKECKKKKESLQGRER-- 118

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
           S +  S  + + L  S +   PE++I EMGS +EV+L +G++D+ +FY+ IRIL+++ AE
Sbjct: 119 SHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDDQFIFYDVIRILHQDGAE 178

Query: 121 IINVSYSLLDDTILYSLHAE 141
           I+N ++S++ +TI + +HAE
Sbjct: 179 ILNANFSVVGNTIFHVIHAE 194

BLAST of MELO3C013627T1 vs. NCBI nr
Match: gi|567909955|ref|XP_006447291.1| (hypothetical protein CICLE_v10016466mg [Citrus clementina])

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-23
Identity = 61/140 (43.57%), Postives = 98/140 (70.00%), Query Frame = 1

Query: 1   MKSLYSKLNSLLPSHHSNDQLPRTVTDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIA 60
           MK+LYS L SLLP+  S ++L  ++ DQ++ AINYIK LE KLK+ ++KKE    R +  
Sbjct: 59  MKNLYSTLKSLLPNQPSKEEL--SLPDQVDEAINYIKMLETKLKECKKKKESLQGRER-- 118

Query: 61  SSSTASSSSYSALSISQNRNVPELKIKEMGSAVEVVLKTGLEDRSMFYETIRILNEERAE 120
           S +  S  + + L  S +   PE++I EMGS +EV+L +G++D+ +FY+ IRIL+++ AE
Sbjct: 119 SHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDDQFIFYDVIRILHQDGAE 178

Query: 121 IINVSYSLLDDTILYSLHAE 141
           I+N ++S++ +TI + +HAE
Sbjct: 179 ILNANFSVVGNTIFHVIHAE 194

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BH036_ARATH1.9e-0727.97Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A061E482_THECC2.4e-2547.14Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 OS=Th... [more]
A0A061E322_THECC2.4e-2547.14Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 OS=Th... [more]
A0A061EAX8_THECC7.1e-2547.18Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 OS=Th... [more]
V4UE19_9ROSI3.9e-2343.57Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1[more]
V4U3N5_9ROSI3.9e-2343.57Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G20970.11.6e-2340.85 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51780.11.1e-0827.97 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
gi|590690815|ref|XP_007043611.1|3.5e-2547.14Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 [Theo... [more]
gi|590690822|ref|XP_007043613.1|3.5e-2547.14Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 [Theo... [more]
gi|590690818|ref|XP_007043612.1|1.0e-2447.18Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 [Theo... [more]
gi|567909957|ref|XP_006447292.1|5.6e-2343.57hypothetical protein CICLE_v10016466mg [Citrus clementina][more]
gi|567909955|ref|XP_006447291.1|5.6e-2343.57hypothetical protein CICLE_v10016466mg [Citrus clementina][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR015660MASH1/Ascl1a-like
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C013627MELO3C013627gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C013627T1MELO3C013627T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C013627T1.cds1MELO3C013627T1.cds1CDS
MELO3C013627T1.cds2MELO3C013627T1.cds2CDS


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 1..58
score: 2.7
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 1..140
score: 1.1
NoneNo IPR availableunknownCoilCoilcoord: 29..56
scor
NoneNo IPR availablePANTHERPTHR13935:SF53BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEINcoord: 1..140
score: 1.1