MELO3C012761T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C012761T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPhosphoglycolate phosphatase
Locationchr1 : 23195728 .. 23196066 (-)
Sequence length339
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGGAAAAATCGACAGTGAGTGAAAGAATCGCAACGAATCTACCAGTAATGAAGAGTATAGTTGAAGGAGGAAGTATACCTATGAAAAGAATCGAGAACGAAGAACAAAGGAAGGAAATAGATCCTGAAGAACAAAGGAAGAAAATAGAAACTGAAGAGAAGGTGAGCGAAGAACAAACAAAGAAGATAGGAATTGAAGAAGATATAAGCGATCGAAACAAATTCAAGAAGGTAGAGTTACCGAGGTTTAGCGGAACAAGAAGTTCGATTCATTTATTTTTTGGACCGAACAGAATTTCCAAAAATATAAACCGATCGATTCTAAGAGAGTAA

mRNA sequence

ATGGTGAAGGAAAAATCGACAGTGAGTGAAAGAATCGCAACGAATCTACCAGTAATGAAGAGTATAGTTGAAGGAGGAAGTATACCTATGAAAAGAATCGAGAACGAAGAACAAAGGAAGGAAATAGATCCTGAAGAACAAAGGAAGAAAATAGAAACTGAAGAGAAGGTGAGCGAAGAACAAACAAAGAAGATAGGAATTGAAGAAGATATAAGCGATCGAAACAAATTCAAGAAGGTAGAGTTACCGAGGTTTAGCGGAACAAGAAGTTCGATTCATTTATTTTTTGGACCGAACAGAATTTCCAAAAATATAAACCGATCGATTCTAAGAGAGTAA

Coding sequence (CDS)

ATGGTGAAGGAAAAATCGACAGTGAGTGAAAGAATCGCAACGAATCTACCAGTAATGAAGAGTATAGTTGAAGGAGGAAGTATACCTATGAAAAGAATCGAGAACGAAGAACAAAGGAAGGAAATAGATCCTGAAGAACAAAGGAAGAAAATAGAAACTGAAGAGAAGGTGAGCGAAGAACAAACAAAGAAGATAGGAATTGAAGAAGATATAAGCGATCGAAACAAATTCAAGAAGGTAGAGTTACCGAGGTTTAGCGGAACAAGAAGTTCGATTCATTTATTTTTTGGACCGAACAGAATTTCCAAAAATATAAACCGATCGATTCTAAGAGAGTAA

Protein sequence

MVKEKSTVSERIATNLPVMKSIVEGGSIPMKRIENEEQRKEIDPEEQRKKIETEEKVSEEQTKKIGIEEDISDRNKFKKVELPRFSGTRSSIHLFFGPNRISKNINRSILRE*
Homology
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BLAST of MELO3C012761T1 vs. NCBI nr
Match: gi|659113968|ref|XP_008456845.1| (PREDICTED: uncharacterized protein LOC103496676 [Cucumis melo])

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-18
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 1 

Query: 18  VMKSIVEGGSIPMKRIENEEQRKEIDPEEQRKKIETEEKVSEEQTKKIGIEEDISDRNKF 77
           +MKSIVEGGS PM+RIE +EQRKE         I+TEEKV EEQTKKIGIEEDISDR+KF
Sbjct: 1   MMKSIVEGGSTPMERIETKEQRKE---------IQTEEKVGEEQTKKIGIEEDISDRHKF 60

Query: 78  KKVELPRFSGTRSSIHLFFGPNRISKNINR 108
           KKVEL RFSG +    +F    RI +N  +
Sbjct: 61  KKVELQRFSGKKFDSFIF----RIKRNFQK 77

The following BLAST results are available for this feature:
BLAST of MELO3C012761T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113968|ref|XP_008456845.1|2.6e-1862.22PREDICTED: uncharacterized protein LOC103496676 [Cucumis melo][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C012761MELO3C012761gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C012761T1MELO3C012761T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C012761T1.cds1MELO3C012761T1.cds1CDS