MELO3C012662T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012662T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Lipid transfer protein
Location	chr1 : 20945407 .. 20946933 (+)
Sequence length	619

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCAAAATAAGAACCCAAAATGAAATTTCTTAGTCCCTTCTTTTTACTCTTGGCCTTCGCATTGGTGGCTATTATTCTTCCGGTCAATGGGCAAATGAATATGTCCTGTAGTGCCTCCATGGTCTCAAGCTTTAGTCCTTGCTTGAACTTTGTCACTAATAGCTCAGCCAATGGCACTTCCCCGACCGCTGATTGCTGCAACGCAATCCGATCACTTGCAAGTGGTGGTCGGGACTGTCTTTGCCTCATCGTCACCGGAGGAGTTCCTTTCCAAATACCTATCAATAGGACTCTTGCTATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCATACAATGCAATGGTATATGAGTTTCTAATTATTCTTTAATTATCATTTCTATTTAGTCTCTGTATTAAAAATGTAATATATGATAAAATATTATTTTATTCATTTTTAGATCATCTAATTTTAATTCTTGTACATTCAGAAATTCAATTCTTATTATTAACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACTANNNNNNNNNNNNNNNNNNNNTATATATATATATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGATTTTGAAAACATACTCACATATATTGAAAATGTATTTTCATGCATGGATAGTGAATTATCACTTCTAGCTATTATCAAATTTGAAAACATATTTTCTTGAATGAGTCCTATTATATCCCTCTTATTGTTTTTTTCTTCTACTTATTCTTATTTGTATTTTGATATTGGATCGGTAACCGTTGATTTAGGTTTTTAAAAATCAAACTTTTCACTCCTAAAGTTCTTTGTGTGTATATATATAATTTAGCTAAGACTTTTGTAAATTTTTGTCAATAATCACTAATGCGTTAAATAATAGACAATATAATTTGTTATGAAATTACTAAATTGGGTACCCTTCATGTTGTTTCAGCCGCTACTGCTCCTGCTTCAGCTCCAGGTACCATTTTCTAAACAATCTTCATCTTCTTCCTCTTCTTATCATTCAAATTTTCACATTTTCCCCCTTAATCTTCTGAAATTTACAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGGTAATCACCAATCTCAATTGATCTTTTTACGCTGTTTCTTGTTCTTCTCTCTAAGACTTTTCTTTTTGCAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

mRNA sequence

AATTTCAAAATAAGAACCCAAAATGAAATTTCTTAGTCCCTTCTTTTTACTCTTGGCCTTCGCATTGGTGGCTATTATTCTTCCGGTCAATGGGCAAATGAATATGTCCTGTAGTGCCTCCATGGTCTCAAGCTTTAGTCCTTGCTTGAACTTTGTCACTAATAGCTCAGCCAATGGCACTTCCCCGACCGCTGATTGCTGCAACGCAATCCGATCACTTGCAAGTGGTGGTCGGGACTGTCTTTGCCTCATCGTCACCGGAGGAGTTCCTTTCCAAATACCTATCAATAGGACTCTTGCTATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCATACAATGCAATGCCGCTACTGCTCCTGCTTCAGCTCCAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

Coding sequence (CDS)

ATGAAATTTCTTAGTCCCTTCTTTTTACTCTTGGCCTTCGCATTGGTGGCTATTATTCTTCCGGTCAATGGGCAAATGAATATGTCCTGTAGTGCCTCCATGGTCTCAAGCTTTAGTCCTTGCTTGAACTTTGTCACTAATAGCTCAGCCAATGGCACTTCCCCGACCGCTGATTGCTGCAACGCAATCCGATCACTTGCAAGTGGTGGTCGGGACTGTCTTTGCCTCATCGTCACCGGAGGAGTTCCTTTCCAAATACCTATCAATAGGACTCTTGCTATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCATACAATGCAATGCCGCTACTGCTCCTGCTTCAGCTCCAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

Protein sequence

MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSNSFPDSFLLMGLAFVILKI*

Homology

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BLAST of MELO3C012662T1 vs. Swiss-Prot
Match: AGP17_ARATH (Lysine-rich arabinogalactan protein 17 OS=Arabidopsis thaliana GN=AGP17 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.7e-06
Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 1


Query: 126 PSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSNS 182
           P+ +P  SP+ SP  P+PT+PA++P++P     EAP++T    PV  P S  P+++
Sbjct: 24  PATAPIHSPSTSPHKPKPTSPAISPAAPTPESTEAPAKTPVEAPVEAPPSPTPAST 79

HSP 2 Score: 35.4 bits (80), Expect = 8.5e-01
Identity = 21/52 (40.38%), Postives = 25/52 (48.08%), Query Frame = 1


Query: 112 ATAPASAPASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSP-VVPEAEAPS 163
           A  P  AP   P  P+  P  +P  SP AP P   A TPS+P + P A+ P+
Sbjct: 60  AKTPVEAPVEAPPSPT--PASTPQISPPAPSP--EADTPSAPEIAPSADVPA 107

HSP 3 Score: 33.9 bits (76), Expect = 2.5e+00
Identity = 24/79 (30.38%), Postives = 36/79 (45.57%), Query Frame = 1


Query: 112 ATAPASAPASIPLGPS--LSPQPSPTA-SPQAPEPTTPALTPS----SPVVPEAEAPSET 171
           A  P  AP   P  P+   +PQ SP A SP+A  P+ P + PS    +P + + +  ++ 
Sbjct: 60  AKTPVEAPVEAPPSPTPASTPQISPPAPSPEADTPSAPEIAPSADVPAPALTKHKKKTKK 119

Query: 172 GGSRPVLTPSSAVPSNSFP 184
             + P   P+S + S   P
Sbjct: 120 HKTAPAPGPASELLSPPAP 138

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BLAST of MELO3C012662T1 vs. TrEMBL
Match: A0A0A0K3Y9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232570 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.0e-101
Identity = 186/200 (93.00%), Postives = 195/200 (97.50%), Query Frame = 1


Query: 1   MKFLSPFFLLLAFALVAIILP--VNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTAD 60
           MKF+SPFFLLLAF LVAIILP  VNGQMNMSCSASMVS+FSPCLNFVTNSSANGTSPT+D
Sbjct: 1   MKFVSPFFLLLAFTLVAIILPHSVNGQMNMSCSASMVSTFSPCLNFVTNSSANGTSPTSD 60

Query: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASA 120
           CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVP+QCNAATAPASA
Sbjct: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAATAPASA 120

Query: 121 PASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVP 180
           PASIPLGP+L PQPSP+ASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSS VP
Sbjct: 121 PASIPLGPTLPPQPSPSASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSDVP 180

Query: 181 SNSFPDSFLLMGLAFVILKI 199
           SNSFP++FLLMGLAFVILK+
Sbjct: 181 SNSFPNTFLLMGLAFVILKV 200

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BLAST of MELO3C012662T1 vs. TrEMBL
Match: A0A061EN01_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_020658 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.0e-58
Identity = 121/202 (59.90%), Postives = 146/202 (72.28%), Query Frame = 1


Query: 10  LLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASG 69
           +L  AL A++LPV GQ+N  CS SM+S+F+PC+NF+ NS+ANGTSPTADCC ++++L SG
Sbjct: 14  VLFVALTALMLPVYGQINTPCSPSMLSTFTPCINFLRNSTANGTSPTADCCKSLQTLTSG 73

Query: 70  GRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAAT-APASAPASIPLGPSL 129
           GRDCLCLIVTG VPFQIPINRTLAISLPRACN+PGVP+QC AA   P  AP  I L P+L
Sbjct: 74  GRDCLCLIVTGSVPFQIPINRTLAISLPRACNMPGVPVQCKAAAGVPVPAPGPIALSPTL 133

Query: 130 SPQPSPTASPQ---APEP----------TTPALTPSSPVVPEAEAPSETGGSRPVLTPSS 189
           SP  SPT SP+    PEP          TTPALTP S     +EAP+ + GSRPVLTPSS
Sbjct: 134 SPGASPTLSPKGSLVPEPTPSAEAPEFDTTPALTPPSSTA-GSEAPTASTGSRPVLTPSS 193

Query: 190 AVPSNSFPDSFLLMGLAFVILK 198
           A P+  F    ++  L+FVI K
Sbjct: 194 ANPAYCFSPFLVVFALSFVIFK 214

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BLAST of MELO3C012662T1 vs. TrEMBL
Match: F6HDR9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03750 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.9e-56
Identity = 117/204 (57.35%), Postives = 139/204 (68.14%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGG 70
           LA AL+ +I+PV GQ++ SCSASM+SSF+PC+NFVTNSS NGTSPTADCCNA+RSL S  
Sbjct: 14  LAIALMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSLTSTS 73

Query: 71  RDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSP 130
            DCLCLIVTG VPFQ+PINRTLAISLPRACN   VP+QC A  AP  AP    LGP+LSP
Sbjct: 74  MDCLCLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSP 133

Query: 131 QPSPTASPQAPEP------------------TTPALTPSSPVVPEAEAPSETGGSRPVLT 190
           Q +P  SP  P P                  TTP+LTP SP V +++AP+ T GSRPVLT
Sbjct: 134 QATP--SPTGPSPKASSVPGSTSPALAPGSDTTPSLTPDSPTV-DSDAPTTTTGSRPVLT 193

Query: 191 PSSAVPSNSFPDSFLLMGLAFVIL 197
           PS+     S   S +L  L  + +
Sbjct: 194 PSAGNRPQSLSPSLVLFVLGIIFI 214

[Close]

BLAST of MELO3C012662T1 vs. TrEMBL
Match: U5G1T3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09530g PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.9e-55
Identity = 116/201 (57.71%), Postives = 141/201 (70.15%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNS-SANGTSPTADCCNAIRSLASG 70
           LA AL  +ILPV GQ+N +C+AS++++F+PC+NF+TNS +ANGTSPTA CC A+++L S 
Sbjct: 14  LAVALAVMILPVYGQINTACTASVLATFTPCMNFLTNSTAANGTSPTAGCCGALKNLTSN 73

Query: 71  GRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLS 130
           G DC CLIVTG VPF IPINRTLAISLPRACN+PGVP+QC A  +P  AP  + LGP+LS
Sbjct: 74  GMDCFCLIVTGSVPFSIPINRTLAISLPRACNMPGVPVQCKATGSPIPAPGPVTLGPTLS 133

Query: 131 PQPSPTASPQA---PEPTTPALTPSSPVVPEAEAPSETG---------GSRPVLTPSSA- 190
           P  SP+ASP+A   PEPT   L P S   P    PS TG         GSRPVLTP SA 
Sbjct: 134 PGVSPSASPEAPVVPEPTPSTLPPVSDTTPLLTPPSSTGDTGAPTSTTGSRPVLTPPSAS 193

Query: 191 VPSNSFPDSFLLMGLAFVILK 198
            PS+S   S LL  + FV+ K
Sbjct: 194 APSHSLSPSLLLFAVGFVLFK 214

[Close]

BLAST of MELO3C012662T1 vs. TrEMBL
Match: A0A161Y498_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024173 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.1e-55
Identity = 111/199 (55.78%), Postives = 144/199 (72.36%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGG 70
           LA A++ +I+PV GQ+N +CS SM+SSFS C +F+TNS+ANGTSP++DCCN+++S+ S G
Sbjct: 15  LAIAIIVLIVPVYGQINTACSPSMLSSFSSCASFITNSTANGTSPSSDCCNSLKSITSNG 74

Query: 71  RDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATA--PASAPASIPLGPSL 130
            DCLCLIVTG VPFQIPINRTLAI+LPRACN+PGVP+QC A+++  PA  PA++  GP+L
Sbjct: 75  TDCLCLIVTGSVPFQIPINRTLAIALPRACNMPGVPLQCKASSSPLPAPGPAALGQGPTL 134

Query: 131 SPQPSPTASPQA---PEPTTPALTPSSPVVPEAEAPSETGGS-------RPVLTPSSAVP 190
           SP  SP ASP A   P+  +PA+TP S   P    PS+T G+       RPV+ PS+A P
Sbjct: 135 SPGISPAASPSASGVPQAESPAMTPESNATPSLTPPSDTAGAPTTNSGIRPVVNPSAASP 194

Query: 191 SNSFPDSFLLMGLAFVILK 198
             SF  +FLL  L    LK
Sbjct: 195 VFSFSPAFLLALLGATFLK 213

[Close]

BLAST of MELO3C012662T1 vs. TAIR10
Match: AT3G22620.1 (AT3G22620.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-46
Identity = 104/200 (52.00%), Postives = 129/200 (64.50%), Query Frame = 1


Query: 11  LAFALVAII-LPVNGQMN--MSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLA 70
           L  A++A++ LP+ GQ      C+ SM+++ SPC+ F+TNSS+NGTSP++DCCN++RSL 
Sbjct: 7   LVVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSLT 66

Query: 71  SGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPA-SIPLGP 130
           +GG  CLCLIVTG VPF IPINRT A+SLPRACN+P VP+QC A  APA+AP  +   GP
Sbjct: 67  TGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGPAATFGP 126

Query: 131 SLSPQPSPTASPQAPEPTTPALTPSS----PVVPEAE--AP-SETGG--SRPVLTPSSAV 190
           S+S  P P   P  PEPT  A TP S    P  P  +  AP S+ GG  SRP  TPSSA 
Sbjct: 127 SMS--PGPETDPIVPEPTPAAQTPQSDTTRPFTPSVDGGAPTSDDGGSTSRPSETPSSAY 186

Query: 191 PSNSFPDSFLLMGLAFVILK 198
              +   S L   +A V LK
Sbjct: 187 ---ALSPSLLFFSIALVALK 201

[Close]

BLAST of MELO3C012662T1 vs. TAIR10
Match: AT1G05450.2 (AT1G05450.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38
Identity = 86/195 (44.10%), Postives = 111/195 (56.92%), Query Frame = 1


Query: 11  LAFALVAIILPVN--GQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLAS 70
           L F+L++   P +   Q+N  CS SM+SS + C +F+T     G+ PT+DCC A++SL  
Sbjct: 12  LIFSLLSSNSPTSILAQINTPCSPSMLSSVTGCTSFLTGG---GSFPTSDCCGALKSLTG 71

Query: 71  GGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSL 130
            G DCLCLIVT GVP  IPINRTLAISLPRAC +PGVP+QC A+ AP   P     GP+ 
Sbjct: 72  TGMDCLCLIVTAGVPISIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTT 131

Query: 131 SPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETG------GSRPVLTPSSAVPSNSF 190
           SP  S T+ P+      P  +P++   P  +  S +G      G  P    SS   S+S 
Sbjct: 132 SPTDSQTSDPEGSASFRPPTSPTTSQTPNDKDLSGSGNGGDPMGFAPPPPSSSPSSSHSL 191

Query: 191 PDSFLLMGLAFVILK 198
             S+LL   AF I+K
Sbjct: 192 KLSYLLFAFAFTIIK 203

[Close]

BLAST of MELO3C012662T1 vs. TAIR10
Match: AT2G48140.1 (AT2G48140.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-30
Identity = 69/165 (41.82%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 25  QMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPF 84
           Q++  C++SM+S+F+PCLNF+T SS    +PTA CC+++++L + G  C CLI+T  VP 
Sbjct: 22  QISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPL 81

Query: 85  QIP-INRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSPQPSP--------- 144
               INRTLA++LPRAC + GVPIQC AA  P  AP  +P   +  PQ S          
Sbjct: 82  PTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFLIAPPPQVSAFSPGASKAA 141

Query: 145 -TASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVP 179
            T   QAP P TPA  P+ P       P +       L  SS  P
Sbjct: 142 GTTPTQAPAPDTPADGPTGPTTKSGIRPVDQPMQPTGLAQSSTSP 186

[Close]

BLAST of MELO3C012662T1 vs. TAIR10
Match: AT2G48130.1 (AT2G48130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 65/186 (34.95%), Postives = 92/186 (49.46%), Query Frame = 1


Query: 14  ALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGGRDC 73
           ALVA +  V      S   S +++ SPCL+++T    N T+P+  CC+ + S+      C
Sbjct: 13  ALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITG---NSTTPSQPCCSRLDSVIKSSPQC 72

Query: 74  LCLIVTGGVP-FQIPINRTLAISLPRACNLPGVPI-QCNAATAPASAPASIPLGPSLSPQ 133
           +C  V   +P   + INRT A+ LP ACN+   P+ QCNAAT P + P          P 
Sbjct: 73  ICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQP----------PA 132

Query: 134 PSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVL---TPSSAVPSNSFPDSFLL 193
           PSPT   + P+ T   LTP+S  +P A +    GGS+ V    T SS+   +  P  FL+
Sbjct: 133 PSPT--EKTPDVT---LTPTS--LPGARS-GVGGGSKTVPSVGTGSSSRNVDPLPLHFLM 177

Query: 194 MGLAFV 195
             +  V
Sbjct: 193 FAVLVV 177

[Close]

BLAST of MELO3C012662T1 vs. TAIR10
Match: AT3G22600.1 (AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.2e-14
Identity = 52/167 (31.14%), Postives = 76/167 (45.51%), Query Frame = 1


Query: 3   FLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNA 62
           FL+ F  +++  +V+           SC+ +++S  SPCLN++T    N TSP   CCN 
Sbjct: 9   FLTVFMAVMSSTMVSA--------QSSCTNALIS-MSPCLNYITG---NSTSPNQQCCNQ 68

Query: 63  IRSLASGGRDCLCLIVTGG-VPFQIPINRTLAISLPRACNLPGVPI-QCNAATAPASAPA 122
           +  +     DCLC ++ GG     I +N+T A+ LPRACN+   P+ +CN          
Sbjct: 69  LSRVVQSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGG------- 128

Query: 123 SIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGS 168
               G   S   SP  SP +  P   + T     V E + P  + GS
Sbjct: 129 ----GGGGSTSDSPAESPNSSGPGNGSKTVP---VGEGDGPPSSDGS 149

[Close]

BLAST of MELO3C012662T1 vs. NCBI nr
Match: gi|659092646|ref|XP_008447160.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 3.0e-107
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 1   MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC 60
           MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC
Sbjct: 1   MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC 60

Query: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPA 120
           NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPA
Sbjct: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPA 120

Query: 121 SIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSN 180
           SIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSN
Sbjct: 121 SIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSN 180

Query: 181 SFPDSFLLMGLAFVILKI 199
           SFPDSFLLMGLAFVILKI
Sbjct: 181 SFPDSFLLMGLAFVILKI 198

[Close]

BLAST of MELO3C012662T1 vs. NCBI nr
Match: gi|778725866|ref|XP_011659016.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 7.2e-101
Identity = 186/200 (93.00%), Postives = 195/200 (97.50%), Query Frame = 1


Query: 1   MKFLSPFFLLLAFALVAIILP--VNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTAD 60
           MKF+SPFFLLLAF LVAIILP  VNGQMNMSCSASMVS+FSPCLNFVTNSSANGTSPT+D
Sbjct: 1   MKFVSPFFLLLAFTLVAIILPHSVNGQMNMSCSASMVSTFSPCLNFVTNSSANGTSPTSD 60

Query: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASA 120
           CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVP+QCNAATAPASA
Sbjct: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAATAPASA 120

Query: 121 PASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVP 180
           PASIPLGP+L PQPSP+ASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSS VP
Sbjct: 121 PASIPLGPTLPPQPSPSASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSDVP 180

Query: 181 SNSFPDSFLLMGLAFVILKI 199
           SNSFP++FLLMGLAFVILK+
Sbjct: 181 SNSFPNTFLLMGLAFVILKV 200

[Close]

BLAST of MELO3C012662T1 vs. NCBI nr
Match: gi|590658277|ref|XP_007034806.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 121/202 (59.90%), Postives = 146/202 (72.28%), Query Frame = 1


Query: 10  LLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASG 69
           +L  AL A++LPV GQ+N  CS SM+S+F+PC+NF+ NS+ANGTSPTADCC ++++L SG
Sbjct: 14  VLFVALTALMLPVYGQINTPCSPSMLSTFTPCINFLRNSTANGTSPTADCCKSLQTLTSG 73

Query: 70  GRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAAT-APASAPASIPLGPSL 129
           GRDCLCLIVTG VPFQIPINRTLAISLPRACN+PGVP+QC AA   P  AP  I L P+L
Sbjct: 74  GRDCLCLIVTGSVPFQIPINRTLAISLPRACNMPGVPVQCKAAAGVPVPAPGPIALSPTL 133

Query: 130 SPQPSPTASPQ---APEP----------TTPALTPSSPVVPEAEAPSETGGSRPVLTPSS 189
           SP  SPT SP+    PEP          TTPALTP S     +EAP+ + GSRPVLTPSS
Sbjct: 134 SPGASPTLSPKGSLVPEPTPSAEAPEFDTTPALTPPSSTA-GSEAPTASTGSRPVLTPSS 193

Query: 190 AVPSNSFPDSFLLMGLAFVILK 198
           A P+  F    ++  L+FVI K
Sbjct: 194 ANPAYCFSPFLVVFALSFVIFK 214

[Close]

BLAST of MELO3C012662T1 vs. NCBI nr
Match: gi|1000970797|ref|XP_015573472.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Ricinus communis])

HSP 1 Score: 227.3 bits (578), Expect = 2.4e-56
Identity = 115/201 (57.21%), Postives = 148/201 (73.63%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGG 70
           LA AL+ +I P +GQ+N  C+ S++S F+PC++F+TNS+ANGTSPT+DCC+++++L   G
Sbjct: 14  LAVALIFLIFPAHGQINTPCTPSLLSVFTPCMSFLTNSTANGTSPTSDCCSSLKNLTGNG 73

Query: 71  RDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSP 130
            DCLCLIVTG VPFQIPINRTLAISLPRACN+ GVP+QC A+ +P  AP    LGP+ SP
Sbjct: 74  MDCLCLIVTGSVPFQIPINRTLAISLPRACNMAGVPVQCKASGSPLPAPGPASLGPTPSP 133

Query: 131 QPSPTASPQA---PEP----------TTPALTPSSPVVPEAEAPSETGGSRPVLT-PSSA 190
           + SP+ASP+A   PEP          TTP LTPSSP V +  AP+ T GSRPVLT PS+A
Sbjct: 134 RISPSASPKASVVPEPTPSTSPPESSTTPVLTPSSPTV-DTGAPTSTTGSRPVLTPPSAA 193

Query: 191 VPSNSFPDSFLLMGLAFVILK 198
           +PS S   S LL  + F++LK
Sbjct: 194 IPSYSISPSVLLFAIGFLVLK 213

[Close]

BLAST of MELO3C012662T1 vs. NCBI nr
Match: gi|225432724|ref|XP_002278974.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Vitis vinifera])

HSP 1 Score: 226.5 bits (576), Expect = 4.2e-56
Identity = 117/204 (57.35%), Postives = 139/204 (68.14%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGG 70
           LA AL+ +I+PV GQ++ SCSASM+SSF+PC+NFVTNSS NGTSPTADCCNA+RSL S  
Sbjct: 14  LAIALMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSLTSTS 73

Query: 71  RDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSP 130
            DCLCLIVTG VPFQ+PINRTLAISLPRACN   VP+QC A  AP  AP    LGP+LSP
Sbjct: 74  MDCLCLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSP 133

Query: 131 QPSPTASPQAPEP------------------TTPALTPSSPVVPEAEAPSETGGSRPVLT 190
           Q +P  SP  P P                  TTP+LTP SP V +++AP+ T GSRPVLT
Sbjct: 134 QATP--SPTGPSPKASSVPGSTSPALAPGSDTTPSLTPDSPTV-DSDAPTTTTGSRPVLT 193

Query: 191 PSSAVPSNSFPDSFLLMGLAFVIL 197
           PS+     S   S +L  L  + +
Sbjct: 194 PSAGNRPQSLSPSLVLFVLGIIFI 214

The following BLAST results are available for this feature:

BLAST of MELO3C012662T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGP17_ARATH	6.7e-06	39.29	Lysine-rich arabinogalactan protein 17 OS=Arabidopsis thaliana GN=AGP17 PE=2 SV=...	[more]

BLAST of MELO3C012662T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3Y9_CUCSA	5.0e-101	93.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232570 PE=4 SV=1	[more]
A0A061EN01_THECC	9.0e-58	59.90	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
F6HDR9_VITVI	2.9e-56	57.35	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03750 PE=4 SV=...	[more]
U5G1T3_POPTR	1.9e-55	57.71	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09530g PE=4 SV=1	[more]
A0A161Y498_DAUCA	7.1e-55	55.78	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024173 PE=4 SV=1	[more]

BLAST of MELO3C012662T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22620.1	1.1e-46	52.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G05450.2	1.4e-38	44.10	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G48140.1	1.4e-30	41.82	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G48130.1	2.4e-17	34.95	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G22600.1	3.2e-14	31.14	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of MELO3C012662T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092646\|ref\|XP_008447160.1\|	3.0e-107	100.00	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
gi\|778725866\|ref\|XP_011659016.1\|	7.2e-101	93.00	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis s...	[more]
gi\|590658277\|ref\|XP_007034806.1\|	1.3e-57	59.90	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
gi\|1000970797\|ref\|XP_015573472.1\|	2.4e-56	57.21	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Ricinus c...	[more]
gi\|225432724\|ref\|XP_002278974.1\|	4.2e-56	57.35	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Vitis vin...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C012662	MELO3C012662	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C012662T1	MELO3C012662T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C012662T1.cds1	MELO3C012662T1.cds1	CDS
MELO3C012662T1.cds2	MELO3C012662T1.cds2	CDS
MELO3C012662T1.cds3	MELO3C012662T1.cds3	CDS
MELO3C012662T1.cds4	MELO3C012662T1.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 15..109 score: 1.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 30..109 score: 9.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..105 score: 8.51
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 29..110 score: 1.0
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 9..168 score: 3.5
None	No IPR available	PANTHER	PTHR33044:SF13	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN-RELATED	coord: 9..168 score: 3.5