MELO3C012662 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012662
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Lipid transfer protein
Location	chr1 : 20945407 .. 20946933 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCAAAATAAGAACCCAAAATGAAATTTCTTAGTCCCTTCTTTTTACTCTTGGCCTTCGCATTGGTGGCTATTATTCTTCCGGTCAATGGGCAAATGAATATGTCCTGTAGTGCCTCCATGGTCTCAAGCTTTAGTCCTTGCTTGAACTTTGTCACTAATAGCTCAGCCAATGGCACTTCCCCGACCGCTGATTGCTGCAACGCAATCCGATCACTTGCAAGTGGTGGTCGGGACTGTCTTTGCCTCATCGTCACCGGAGGAGTTCCTTTCCAAATACCTATCAATAGGACTCTTGCTATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCATACAATGCAATGGTATATGAGTTTCTAATTATTCTTTAATTATCATTTCTATTTAGTCTCTGTATTAAAAATGTAATATATGATAAAATATTATTTTATTCATTTTTAGATCATCTAATTTTAATTCTTGTACATTCAGAAATTCAATTCTTATTATTAACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACTANNNNNNNNNNNNNNNNNNNNTATATATATATATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGATTTTGAAAACATACTCACATATATTGAAAATGTATTTTCATGCATGGATAGTGAATTATCACTTCTAGCTATTATCAAATTTGAAAACATATTTTCTTGAATGAGTCCTATTATATCCCTCTTATTGTTTTTTTCTTCTACTTATTCTTATTTGTATTTTGATATTGGATCGGTAACCGTTGATTTAGGTTTTTAAAAATCAAACTTTTCACTCCTAAAGTTCTTTGTGTGTATATATATAATTTAGCTAAGACTTTTGTAAATTTTTGTCAATAATCACTAATGCGTTAAATAATAGACAATATAATTTGTTATGAAATTACTAAATTGGGTACCCTTCATGTTGTTTCAGCCGCTACTGCTCCTGCTTCAGCTCCAGGTACCATTTTCTAAACAATCTTCATCTTCTTCCTCTTCTTATCATTCAAATTTTCACATTTTCCCCCTTAATCTTCTGAAATTTACAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGGTAATCACCAATCTCAATTGATCTTTTTACGCTGTTTCTTGTTCTTCTCTCTAAGACTTTTCTTTTTGCAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

mRNA sequence

AATTTCAAAATAAGAACCCAAAATGAAATTTCTTAGTCCCTTCTTTTTACTCTTGGCCTTCGCATTGGTGGCTATTATTCTTCCGGTCAATGGGCAAATGAATATGTCCTGTAGTGCCTCCATGGTCTCAAGCTTTAGTCCTTGCTTGAACTTTGTCACTAATAGCTCAGCCAATGGCACTTCCCCGACCGCTGATTGCTGCAACGCAATCCGATCACTTGCAAGTGGTGGTCGGGACTGTCTTTGCCTCATCGTCACCGGAGGAGTTCCTTTCCAAATACCTATCAATAGGACTCTTGCTATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCATACAATGCAATGCCGCTACTGCTCCTGCTTCAGCTCCAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

Coding sequence (CDS)

ATGAAATTTCTTAGTCCCTTCTTTTTACTCTTGGCCTTCGCATTGGTGGCTATTATTCTTCCGGTCAATGGGCAAATGAATATGTCCTGTAGTGCCTCCATGGTCTCAAGCTTTAGTCCTTGCTTGAACTTTGTCACTAATAGCTCAGCCAATGGCACTTCCCCGACCGCTGATTGCTGCAACGCAATCCGATCACTTGCAAGTGGTGGTCGGGACTGTCTTTGCCTCATCGTCACCGGAGGAGTTCCTTTCCAAATACCTATCAATAGGACTCTTGCTATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCATACAATGCAATGCCGCTACTGCTCCTGCTTCAGCTCCAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

Protein sequence

MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSNSFPDSFLLMGLAFVILKI*

Homology

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BLAST of MELO3C012662 vs. Swiss-Prot
Match: AGP17_ARATH (Lysine-rich arabinogalactan protein 17 OS=Arabidopsis thaliana GN=AGP17 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.7e-06
Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 1


Query: 126 PSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSNS 182
           P+ +P  SP+ SP  P+PT+PA++P++P     EAP++T    PV  P S  P+++
Sbjct: 24  PATAPIHSPSTSPHKPKPTSPAISPAAPTPESTEAPAKTPVEAPVEAPPSPTPAST 79

HSP 2 Score: 35.4 bits (80), Expect = 8.5e-01
Identity = 21/52 (40.38%), Postives = 25/52 (48.08%), Query Frame = 1


Query: 112 ATAPASAPASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSP-VVPEAEAPS 163
           A  P  AP   P  P+  P  +P  SP AP P   A TPS+P + P A+ P+
Sbjct: 60  AKTPVEAPVEAPPSPT--PASTPQISPPAPSP--EADTPSAPEIAPSADVPA 107

HSP 3 Score: 33.9 bits (76), Expect = 2.5e+00
Identity = 24/79 (30.38%), Postives = 36/79 (45.57%), Query Frame = 1


Query: 112 ATAPASAPASIPLGPS--LSPQPSPTA-SPQAPEPTTPALTPS----SPVVPEAEAPSET 171
           A  P  AP   P  P+   +PQ SP A SP+A  P+ P + PS    +P + + +  ++ 
Sbjct: 60  AKTPVEAPVEAPPSPTPASTPQISPPAPSPEADTPSAPEIAPSADVPAPALTKHKKKTKK 119

Query: 172 GGSRPVLTPSSAVPSNSFP 184
             + P   P+S + S   P
Sbjct: 120 HKTAPAPGPASELLSPPAP 138

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BLAST of MELO3C012662 vs. TrEMBL
Match: A0A0A0K3Y9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232570 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.0e-101
Identity = 186/200 (93.00%), Postives = 195/200 (97.50%), Query Frame = 1


Query: 1   MKFLSPFFLLLAFALVAIILP--VNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTAD 60
           MKF+SPFFLLLAF LVAIILP  VNGQMNMSCSASMVS+FSPCLNFVTNSSANGTSPT+D
Sbjct: 1   MKFVSPFFLLLAFTLVAIILPHSVNGQMNMSCSASMVSTFSPCLNFVTNSSANGTSPTSD 60

Query: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASA 120
           CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVP+QCNAATAPASA
Sbjct: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAATAPASA 120

Query: 121 PASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVP 180
           PASIPLGP+L PQPSP+ASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSS VP
Sbjct: 121 PASIPLGPTLPPQPSPSASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSDVP 180

Query: 181 SNSFPDSFLLMGLAFVILKI 199
           SNSFP++FLLMGLAFVILK+
Sbjct: 181 SNSFPNTFLLMGLAFVILKV 200

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BLAST of MELO3C012662 vs. TrEMBL
Match: A0A061EN01_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_020658 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.0e-58
Identity = 121/202 (59.90%), Postives = 146/202 (72.28%), Query Frame = 1


Query: 10  LLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASG 69
           +L  AL A++LPV GQ+N  CS SM+S+F+PC+NF+ NS+ANGTSPTADCC ++++L SG
Sbjct: 14  VLFVALTALMLPVYGQINTPCSPSMLSTFTPCINFLRNSTANGTSPTADCCKSLQTLTSG 73

Query: 70  GRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAAT-APASAPASIPLGPSL 129
           GRDCLCLIVTG VPFQIPINRTLAISLPRACN+PGVP+QC AA   P  AP  I L P+L
Sbjct: 74  GRDCLCLIVTGSVPFQIPINRTLAISLPRACNMPGVPVQCKAAAGVPVPAPGPIALSPTL 133

Query: 130 SPQPSPTASPQ---APEP----------TTPALTPSSPVVPEAEAPSETGGSRPVLTPSS 189
           SP  SPT SP+    PEP          TTPALTP S     +EAP+ + GSRPVLTPSS
Sbjct: 134 SPGASPTLSPKGSLVPEPTPSAEAPEFDTTPALTPPSSTA-GSEAPTASTGSRPVLTPSS 193

Query: 190 AVPSNSFPDSFLLMGLAFVILK 198
           A P+  F    ++  L+FVI K
Sbjct: 194 ANPAYCFSPFLVVFALSFVIFK 214

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BLAST of MELO3C012662 vs. TrEMBL
Match: F6HDR9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03750 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.9e-56
Identity = 117/204 (57.35%), Postives = 139/204 (68.14%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGG 70
           LA AL+ +I+PV GQ++ SCSASM+SSF+PC+NFVTNSS NGTSPTADCCNA+RSL S  
Sbjct: 14  LAIALMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSLTSTS 73

Query: 71  RDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSP 130
            DCLCLIVTG VPFQ+PINRTLAISLPRACN   VP+QC A  AP  AP    LGP+LSP
Sbjct: 74  MDCLCLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSP 133

Query: 131 QPSPTASPQAPEP------------------TTPALTPSSPVVPEAEAPSETGGSRPVLT 190
           Q +P  SP  P P                  TTP+LTP SP V +++AP+ T GSRPVLT
Sbjct: 134 QATP--SPTGPSPKASSVPGSTSPALAPGSDTTPSLTPDSPTV-DSDAPTTTTGSRPVLT 193

Query: 191 PSSAVPSNSFPDSFLLMGLAFVIL 197
           PS+     S   S +L  L  + +
Sbjct: 194 PSAGNRPQSLSPSLVLFVLGIIFI 214

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BLAST of MELO3C012662 vs. TrEMBL
Match: U5G1T3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09530g PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.9e-55
Identity = 116/201 (57.71%), Postives = 141/201 (70.15%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNS-SANGTSPTADCCNAIRSLASG 70
           LA AL  +ILPV GQ+N +C+AS++++F+PC+NF+TNS +ANGTSPTA CC A+++L S 
Sbjct: 14  LAVALAVMILPVYGQINTACTASVLATFTPCMNFLTNSTAANGTSPTAGCCGALKNLTSN 73

Query: 71  GRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLS 130
           G DC CLIVTG VPF IPINRTLAISLPRACN+PGVP+QC A  +P  AP  + LGP+LS
Sbjct: 74  GMDCFCLIVTGSVPFSIPINRTLAISLPRACNMPGVPVQCKATGSPIPAPGPVTLGPTLS 133

Query: 131 PQPSPTASPQA---PEPTTPALTPSSPVVPEAEAPSETG---------GSRPVLTPSSA- 190
           P  SP+ASP+A   PEPT   L P S   P    PS TG         GSRPVLTP SA 
Sbjct: 134 PGVSPSASPEAPVVPEPTPSTLPPVSDTTPLLTPPSSTGDTGAPTSTTGSRPVLTPPSAS 193

Query: 191 VPSNSFPDSFLLMGLAFVILK 198
            PS+S   S LL  + FV+ K
Sbjct: 194 APSHSLSPSLLLFAVGFVLFK 214

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BLAST of MELO3C012662 vs. TrEMBL
Match: A0A161Y498_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024173 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.1e-55
Identity = 111/199 (55.78%), Postives = 144/199 (72.36%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGG 70
           LA A++ +I+PV GQ+N +CS SM+SSFS C +F+TNS+ANGTSP++DCCN+++S+ S G
Sbjct: 15  LAIAIIVLIVPVYGQINTACSPSMLSSFSSCASFITNSTANGTSPSSDCCNSLKSITSNG 74

Query: 71  RDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATA--PASAPASIPLGPSL 130
            DCLCLIVTG VPFQIPINRTLAI+LPRACN+PGVP+QC A+++  PA  PA++  GP+L
Sbjct: 75  TDCLCLIVTGSVPFQIPINRTLAIALPRACNMPGVPLQCKASSSPLPAPGPAALGQGPTL 134

Query: 131 SPQPSPTASPQA---PEPTTPALTPSSPVVPEAEAPSETGGS-------RPVLTPSSAVP 190
           SP  SP ASP A   P+  +PA+TP S   P    PS+T G+       RPV+ PS+A P
Sbjct: 135 SPGISPAASPSASGVPQAESPAMTPESNATPSLTPPSDTAGAPTTNSGIRPVVNPSAASP 194

Query: 191 SNSFPDSFLLMGLAFVILK 198
             SF  +FLL  L    LK
Sbjct: 195 VFSFSPAFLLALLGATFLK 213

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BLAST of MELO3C012662 vs. TAIR10
Match: AT3G22620.1 (AT3G22620.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-46
Identity = 104/200 (52.00%), Postives = 129/200 (64.50%), Query Frame = 1


Query: 11  LAFALVAII-LPVNGQMN--MSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLA 70
           L  A++A++ LP+ GQ      C+ SM+++ SPC+ F+TNSS+NGTSP++DCCN++RSL 
Sbjct: 7   LVVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSLT 66

Query: 71  SGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPA-SIPLGP 130
           +GG  CLCLIVTG VPF IPINRT A+SLPRACN+P VP+QC A  APA+AP  +   GP
Sbjct: 67  TGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGPAATFGP 126

Query: 131 SLSPQPSPTASPQAPEPTTPALTPSS----PVVPEAE--AP-SETGG--SRPVLTPSSAV 190
           S+S  P P   P  PEPT  A TP S    P  P  +  AP S+ GG  SRP  TPSSA 
Sbjct: 127 SMS--PGPETDPIVPEPTPAAQTPQSDTTRPFTPSVDGGAPTSDDGGSTSRPSETPSSAY 186

Query: 191 PSNSFPDSFLLMGLAFVILK 198
              +   S L   +A V LK
Sbjct: 187 ---ALSPSLLFFSIALVALK 201

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BLAST of MELO3C012662 vs. TAIR10
Match: AT1G05450.2 (AT1G05450.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38
Identity = 86/195 (44.10%), Postives = 111/195 (56.92%), Query Frame = 1


Query: 11  LAFALVAIILPVN--GQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLAS 70
           L F+L++   P +   Q+N  CS SM+SS + C +F+T     G+ PT+DCC A++SL  
Sbjct: 12  LIFSLLSSNSPTSILAQINTPCSPSMLSSVTGCTSFLTGG---GSFPTSDCCGALKSLTG 71

Query: 71  GGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSL 130
            G DCLCLIVT GVP  IPINRTLAISLPRAC +PGVP+QC A+ AP   P     GP+ 
Sbjct: 72  TGMDCLCLIVTAGVPISIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTT 131

Query: 131 SPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETG------GSRPVLTPSSAVPSNSF 190
           SP  S T+ P+      P  +P++   P  +  S +G      G  P    SS   S+S 
Sbjct: 132 SPTDSQTSDPEGSASFRPPTSPTTSQTPNDKDLSGSGNGGDPMGFAPPPPSSSPSSSHSL 191

Query: 191 PDSFLLMGLAFVILK 198
             S+LL   AF I+K
Sbjct: 192 KLSYLLFAFAFTIIK 203

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BLAST of MELO3C012662 vs. TAIR10
Match: AT2G48140.1 (AT2G48140.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-30
Identity = 69/165 (41.82%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 25  QMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPF 84
           Q++  C++SM+S+F+PCLNF+T SS    +PTA CC+++++L + G  C CLI+T  VP 
Sbjct: 22  QISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPL 81

Query: 85  QIP-INRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSPQPSP--------- 144
               INRTLA++LPRAC + GVPIQC AA  P  AP  +P   +  PQ S          
Sbjct: 82  PTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFLIAPPPQVSAFSPGASKAA 141

Query: 145 -TASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVP 179
            T   QAP P TPA  P+ P       P +       L  SS  P
Sbjct: 142 GTTPTQAPAPDTPADGPTGPTTKSGIRPVDQPMQPTGLAQSSTSP 186

[Close]

BLAST of MELO3C012662 vs. TAIR10
Match: AT2G48130.1 (AT2G48130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 65/186 (34.95%), Postives = 92/186 (49.46%), Query Frame = 1


Query: 14  ALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGGRDC 73
           ALVA +  V      S   S +++ SPCL+++T    N T+P+  CC+ + S+      C
Sbjct: 13  ALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITG---NSTTPSQPCCSRLDSVIKSSPQC 72

Query: 74  LCLIVTGGVP-FQIPINRTLAISLPRACNLPGVPI-QCNAATAPASAPASIPLGPSLSPQ 133
           +C  V   +P   + INRT A+ LP ACN+   P+ QCNAAT P + P          P 
Sbjct: 73  ICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQP----------PA 132

Query: 134 PSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVL---TPSSAVPSNSFPDSFLL 193
           PSPT   + P+ T   LTP+S  +P A +    GGS+ V    T SS+   +  P  FL+
Sbjct: 133 PSPT--EKTPDVT---LTPTS--LPGARS-GVGGGSKTVPSVGTGSSSRNVDPLPLHFLM 177

Query: 194 MGLAFV 195
             +  V
Sbjct: 193 FAVLVV 177

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BLAST of MELO3C012662 vs. TAIR10
Match: AT3G22600.1 (AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.2e-14
Identity = 52/167 (31.14%), Postives = 76/167 (45.51%), Query Frame = 1


Query: 3   FLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNA 62
           FL+ F  +++  +V+           SC+ +++S  SPCLN++T    N TSP   CCN 
Sbjct: 9   FLTVFMAVMSSTMVSA--------QSSCTNALIS-MSPCLNYITG---NSTSPNQQCCNQ 68

Query: 63  IRSLASGGRDCLCLIVTGG-VPFQIPINRTLAISLPRACNLPGVPI-QCNAATAPASAPA 122
           +  +     DCLC ++ GG     I +N+T A+ LPRACN+   P+ +CN          
Sbjct: 69  LSRVVQSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGG------- 128

Query: 123 SIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGS 168
               G   S   SP  SP +  P   + T     V E + P  + GS
Sbjct: 129 ----GGGGSTSDSPAESPNSSGPGNGSKTVP---VGEGDGPPSSDGS 149

[Close]

BLAST of MELO3C012662 vs. NCBI nr
Match: gi|659092646|ref|XP_008447160.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 3.0e-107
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 1   MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC 60
           MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC
Sbjct: 1   MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC 60

Query: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPA 120
           NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPA
Sbjct: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPA 120

Query: 121 SIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSN 180
           SIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSN
Sbjct: 121 SIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSN 180

Query: 181 SFPDSFLLMGLAFVILKI 199
           SFPDSFLLMGLAFVILKI
Sbjct: 181 SFPDSFLLMGLAFVILKI 198

[Close]

BLAST of MELO3C012662 vs. NCBI nr
Match: gi|778725866|ref|XP_011659016.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 7.2e-101
Identity = 186/200 (93.00%), Postives = 195/200 (97.50%), Query Frame = 1


Query: 1   MKFLSPFFLLLAFALVAIILP--VNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTAD 60
           MKF+SPFFLLLAF LVAIILP  VNGQMNMSCSASMVS+FSPCLNFVTNSSANGTSPT+D
Sbjct: 1   MKFVSPFFLLLAFTLVAIILPHSVNGQMNMSCSASMVSTFSPCLNFVTNSSANGTSPTSD 60

Query: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASA 120
           CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVP+QCNAATAPASA
Sbjct: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAATAPASA 120

Query: 121 PASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVP 180
           PASIPLGP+L PQPSP+ASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSS VP
Sbjct: 121 PASIPLGPTLPPQPSPSASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSDVP 180

Query: 181 SNSFPDSFLLMGLAFVILKI 199
           SNSFP++FLLMGLAFVILK+
Sbjct: 181 SNSFPNTFLLMGLAFVILKV 200

[Close]

BLAST of MELO3C012662 vs. NCBI nr
Match: gi|590658277|ref|XP_007034806.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 121/202 (59.90%), Postives = 146/202 (72.28%), Query Frame = 1


Query: 10  LLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASG 69
           +L  AL A++LPV GQ+N  CS SM+S+F+PC+NF+ NS+ANGTSPTADCC ++++L SG
Sbjct: 14  VLFVALTALMLPVYGQINTPCSPSMLSTFTPCINFLRNSTANGTSPTADCCKSLQTLTSG 73

Query: 70  GRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAAT-APASAPASIPLGPSL 129
           GRDCLCLIVTG VPFQIPINRTLAISLPRACN+PGVP+QC AA   P  AP  I L P+L
Sbjct: 74  GRDCLCLIVTGSVPFQIPINRTLAISLPRACNMPGVPVQCKAAAGVPVPAPGPIALSPTL 133

Query: 130 SPQPSPTASPQ---APEP----------TTPALTPSSPVVPEAEAPSETGGSRPVLTPSS 189
           SP  SPT SP+    PEP          TTPALTP S     +EAP+ + GSRPVLTPSS
Sbjct: 134 SPGASPTLSPKGSLVPEPTPSAEAPEFDTTPALTPPSSTA-GSEAPTASTGSRPVLTPSS 193

Query: 190 AVPSNSFPDSFLLMGLAFVILK 198
           A P+  F    ++  L+FVI K
Sbjct: 194 ANPAYCFSPFLVVFALSFVIFK 214

[Close]

BLAST of MELO3C012662 vs. NCBI nr
Match: gi|1000970797|ref|XP_015573472.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Ricinus communis])

HSP 1 Score: 227.3 bits (578), Expect = 2.4e-56
Identity = 115/201 (57.21%), Postives = 148/201 (73.63%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGG 70
           LA AL+ +I P +GQ+N  C+ S++S F+PC++F+TNS+ANGTSPT+DCC+++++L   G
Sbjct: 14  LAVALIFLIFPAHGQINTPCTPSLLSVFTPCMSFLTNSTANGTSPTSDCCSSLKNLTGNG 73

Query: 71  RDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSP 130
            DCLCLIVTG VPFQIPINRTLAISLPRACN+ GVP+QC A+ +P  AP    LGP+ SP
Sbjct: 74  MDCLCLIVTGSVPFQIPINRTLAISLPRACNMAGVPVQCKASGSPLPAPGPASLGPTPSP 133

Query: 131 QPSPTASPQA---PEP----------TTPALTPSSPVVPEAEAPSETGGSRPVLT-PSSA 190
           + SP+ASP+A   PEP          TTP LTPSSP V +  AP+ T GSRPVLT PS+A
Sbjct: 134 RISPSASPKASVVPEPTPSTSPPESSTTPVLTPSSPTV-DTGAPTSTTGSRPVLTPPSAA 193

Query: 191 VPSNSFPDSFLLMGLAFVILK 198
           +PS S   S LL  + F++LK
Sbjct: 194 IPSYSISPSVLLFAIGFLVLK 213

[Close]

BLAST of MELO3C012662 vs. NCBI nr
Match: gi|225432724|ref|XP_002278974.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Vitis vinifera])

HSP 1 Score: 226.5 bits (576), Expect = 4.2e-56
Identity = 117/204 (57.35%), Postives = 139/204 (68.14%), Query Frame = 1


Query: 11  LAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCCNAIRSLASGG 70
           LA AL+ +I+PV GQ++ SCSASM+SSF+PC+NFVTNSS NGTSPTADCCNA+RSL S  
Sbjct: 14  LAIALMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSLTSTS 73

Query: 71  RDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATAPASAPASIPLGPSLSP 130
            DCLCLIVTG VPFQ+PINRTLAISLPRACN   VP+QC A  AP  AP    LGP+LSP
Sbjct: 74  MDCLCLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSP 133

Query: 131 QPSPTASPQAPEP------------------TTPALTPSSPVVPEAEAPSETGGSRPVLT 190
           Q +P  SP  P P                  TTP+LTP SP V +++AP+ T GSRPVLT
Sbjct: 134 QATP--SPTGPSPKASSVPGSTSPALAPGSDTTPSLTPDSPTV-DSDAPTTTTGSRPVLT 193

Query: 191 PSSAVPSNSFPDSFLLMGLAFVIL 197
           PS+     S   S +L  L  + +
Sbjct: 194 PSAGNRPQSLSPSLVLFVLGIIFI 214

The following BLAST results are available for this feature:

BLAST of MELO3C012662 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGP17_ARATH	6.7e-06	39.29	Lysine-rich arabinogalactan protein 17 OS=Arabidopsis thaliana GN=AGP17 PE=2 SV=...	[more]

BLAST of MELO3C012662 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3Y9_CUCSA	5.0e-101	93.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232570 PE=4 SV=1	[more]
A0A061EN01_THECC	9.0e-58	59.90	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
F6HDR9_VITVI	2.9e-56	57.35	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03750 PE=4 SV=...	[more]
U5G1T3_POPTR	1.9e-55	57.71	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09530g PE=4 SV=1	[more]
A0A161Y498_DAUCA	7.1e-55	55.78	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024173 PE=4 SV=1	[more]

BLAST of MELO3C012662 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22620.1	1.1e-46	52.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G05450.2	1.4e-38	44.10	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G48140.1	1.4e-30	41.82	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G48130.1	2.4e-17	34.95	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G22600.1	3.2e-14	31.14	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of MELO3C012662 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092646\|ref\|XP_008447160.1\|	3.0e-107	100.00	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
gi\|778725866\|ref\|XP_011659016.1\|	7.2e-101	93.00	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis s...	[more]
gi\|590658277\|ref\|XP_007034806.1\|	1.3e-57	59.90	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
gi\|1000970797\|ref\|XP_015573472.1\|	2.4e-56	57.21	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Ricinus c...	[more]
gi\|225432724\|ref\|XP_002278974.1\|	4.2e-56	57.35	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Vitis vin...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008289	lipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012662T1	MELO3C012662T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 15..109 score: 1.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 30..109 score: 9.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..105 score: 8.51
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 29..110 score: 1.0
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 9..168 score: 3.5
None	No IPR available	PANTHER	PTHR33044:SF13	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN-RELATED	coord: 9..168 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C012662	Csa3G146480	Cucumber (Chinese Long) v2	cumeB196
MELO3C012662	Csa7G232570	Cucumber (Chinese Long) v2	cumeB533
MELO3C012662	Cla007516	Watermelon (97103) v1	mewmB253
MELO3C012662	Cla021610	Watermelon (97103) v1	mewmB235
MELO3C012662	ClCG06G006320	Watermelon (Charleston Gray)	mewcgB214
MELO3C012662	Cla97C06G115840	Watermelon (97103) v2	mewmbB196
MELO3C012662	Bhi01G000570	Wax gourd	mewgoB210
MELO3C012662	Bhi12G001507	Wax gourd	mewgoB199
MELO3C012662	CSPI03G12970	Wild cucumber (PI 183967)	cpimeB186
MELO3C012662	CSPI07G10450	Wild cucumber (PI 183967)	cpimeB541
MELO3C012662	Cucsa.239350	Cucumber (Gy14) v1	cgymeB405
MELO3C012662	CmaCh14G017240	Cucurbita maxima (Rimu)	cmameB220
MELO3C012662	CmaCh17G002240	Cucurbita maxima (Rimu)	cmameB329
MELO3C012662	CmoCh17G002140	Cucurbita moschata (Rifu)	cmomeB320
MELO3C012662	Lsi05G016190	Bottle gourd (USVL1VR-Ls)	lsimeB347
MELO3C012662	Lsi09G013080	Bottle gourd (USVL1VR-Ls)	lsimeB021
MELO3C012662	Cp4.1LG12g01980	Cucurbita pepo (Zucchini)	cpemeB126
MELO3C012662	Cp4.1LG03g10790	Cucurbita pepo (Zucchini)	cpemeB560
MELO3C012662	CsGy7G009810	Cucumber (Gy14) v2	cgybmeB471
MELO3C012662	CsaV3_7G022400	Cucumber (Chinese Long) v3	cucmeB551
MELO3C012662	CsaV3_3G013110	Cucumber (Chinese Long) v3	cucmeB190

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
MELO3C012662	MELO3C006518	Melon (DHL92) v3.5.1	memeB092

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012662	Cucurbita maxima (Rimu)	cmameB836
MELO3C012662	Cucurbita moschata (Rifu)	cmomeB818
MELO3C012662	Cucurbita pepo (Zucchini)	cpemeB298
MELO3C012662	Silver-seed gourd	carmeB0329