MELO3C012508.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012508.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	protein RADIALIS-like 1
Location	chr01 : 19043403 .. 19043648 (-)
Sequence length	246

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATGTCTGCTCATGGGTCAACTCAATGGACTGCAATTGAAAACAAAGCCTTTGAGAAAGCTTTGGCAATTTATGACAAAGACACACCTGAGAGATGGCTCAATGTTGCAAAGGCCATTGGTGGAAAAACTGAAGAGGATGTCAAGAGGCATTATCAACTTCTTCTTGAGGATGTTAACCATATTGAGAATGGTCAAATTCCTTTTCCCTATCGAAACTCTACGAGGTCGAGTCGCTGA

mRNA sequence

ATGGCTTCAATGTCTGCTCATGGGTCAACTCAATGGACTGCAATTGAAAACAAAGCCTTTGAGAAAGCTTTGGCAATTTATGACAAAGACACACCTGAGAGATGGCTCAATGTTGCAAAGGCCATTGGTGGAAAAACTGAAGAGGATGTCAAGAGGCATTATCAACTTCTTCTTGAGGATGTTAACCATATTGAGAATGGTCAAATTCCTTTTCCCTATCGAAACTCTACGAGGTCGAGTCGCTGA

Coding sequence (CDS)

ATGGCTTCAATGTCTGCTCATGGGTCAACTCAATGGACTGCAATTGAAAACAAAGCCTTTGAGAAAGCTTTGGCAATTTATGACAAAGACACACCTGAGAGATGGCTCAATGTTGCAAAGGCCATTGGTGGAAAAACTGAAGAGGATGTCAAGAGGCATTATCAACTTCTTCTTGAGGATGTTAACCATATTGAGAATGGTCAAATTCCTTTTCCCTATCGAAACTCTACGAGGTCGAGTCGCTGA

Protein sequence

MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDVNHIENGQIPFPYRNSTRSSR

Homology

[Close]

BLAST of MELO3C012508.2.1 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 8.1e-39
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNSTRSSR 82
          VNHIENGQIPFPYRNSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]

BLAST of MELO3C012508.2.1 vs. NCBI nr
Match: XP_011658943.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis sativus] >KGN44073.1 hypothetical protein Csa_7G168060 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 6.5e-36
Identity = 76/81 (93.83%), Postives = 79/81 (97.53%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS+ WTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNSTRSSR 82
          VNHIE+GQIPFPYR STRSSR
Sbjct: 61 VNHIESGQIPFPYRKSTRSSR 81

[Close]

BLAST of MELO3C012508.2.1 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS  WTA +NKAFEKALA+YDKDTP+RWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V HIE+G++PFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of MELO3C012508.2.1 vs. NCBI nr
Match: XP_022952660.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-like 1 [Cucurbita moschata] >XP_023554744.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.3 bits (342), Expect = 4.5e-29
Identity = 62/78 (79.49%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS+ WTA ENKAFEKALA++D+DTPERW+NVAKAIGGKTE++VKRHYQLL++D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVKD 60

Query: 61 VNHIENGQIPFPYRNSTR 79
          V HIE+G+I FPYR+STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]

BLAST of MELO3C012508.2.1 vs. NCBI nr
Match: XP_004151116.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_7G169070 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 5.8e-29
Identity = 62/76 (81.58%), Postives = 72/76 (94.74%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS+SAHGS  WTA +NKAFE+ALA+YDKDTP+RWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V HIE+G++PFPYR+S
Sbjct: 61 VKHIESGKVPFPYRSS 76

[Close]

BLAST of MELO3C012508.2.1 vs. TAIR10
Match: AT4G39250.1 (RAD-like 1)

HSP 1 Score: 110.2 bits (274), Expect = 6.2e-25
Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2  ASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDV 61
          +SMS+  S  WTA +NKAFE+ALA YD+DTP RW NVAK +GGKT E+VKRHY+LL++D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 NHIENGQIPFP-YRNS 77
          N IENG +PFP YR S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of MELO3C012508.2.1 vs. TAIR10
Match: AT2G21650.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 9.0e-24
Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 3  SMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDVN 62
          SMS++GS  WT  +NKAFE+ALA+YD+DTP+RW NVA+A+GGKT E+ KR Y LL+ D+ 
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIENGQIPFP-YRNSTRSS 81
           IENG +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of MELO3C012508.2.1 vs. TAIR10
Match: AT1G75250.1 (RAD-like 6)

HSP 1 Score: 100.5 bits (249), Expect = 4.9e-22
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S    + WT  +NK FE+ALA+YDKDTP+RW NVAKA+GGKT E+VKRHY +L+ED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNHIENGQIPFP-YRNSTRSSR 82
          + +IE G++P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of MELO3C012508.2.1 vs. TAIR10
Match: AT1G19510.1 (RAD-like 5)

HSP 1 Score: 96.7 bits (239), Expect = 7.1e-21
Identity = 42/72 (58.33%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S   S+ WT+ +NK FE+ALA+YDKDTP+RW NVAKA+G K+ E+VKRHY +L+ED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VNHIENGQIPFP 73
          + +IE   +P P
Sbjct: 61 LMNIEQDLVPLP 72

[Close]

BLAST of MELO3C012508.2.1 vs. TAIR10
Match: AT2G18328.1 (RAD-like 4)

HSP 1 Score: 94.0 bits (232), Expect = 4.6e-20
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S+  ++ WTA E+K FE ALA +DKDTP+RW  +A+A+GGK+ E+VKRHY+LLL D
Sbjct: 1  MAS-SSMSTSSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRD 60

Query: 61 VNHIENGQIPFP-YRNS 77
          VN IE+G+ P P YRN+
Sbjct: 61 VNDIESGRYPQPRYRNT 76

[Close]

BLAST of MELO3C012508.2.1 vs. Swiss-Prot
Match: sp|F4JVB8|RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-23
Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2  ASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDV 61
          +SMS+  S  WTA +NKAFE+ALA YD+DTP RW NVAK +GGKT E+VKRHY+LL++D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 NHIENGQIPFP-YRNS 77
          N IENG +PFP YR S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of MELO3C012508.2.1 vs. Swiss-Prot
Match: sp|Q9SIJ5|RADL2_ARATH (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-22
Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 3  SMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDVN 62
          SMS++GS  WT  +NKAFE+ALA+YD+DTP+RW NVA+A+GGKT E+ KR Y LL+ D+ 
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIENGQIPFP-YRNSTRSS 81
           IENG +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of MELO3C012508.2.1 vs. Swiss-Prot
Match: sp|Q1A173|RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.9e-21
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S    + WT  +NK FE+ALA+YDKDTP+RW NVAKA+GGKT E+VKRHY +L+ED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNHIENGQIPFP-YRNSTRSSR 82
          + +IE G++P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of MELO3C012508.2.1 vs. Swiss-Prot
Match: sp|Q58FS3|RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.9e-21
Identity = 44/77 (57.14%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS    G   W+A ENKAFE+ALA+YDKDTP+RW NVA+A+ G+T E+VK+HY++L+ED
Sbjct: 1  MASTRGSG-RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 60

Query: 61 VNHIENGQIPFPYRNST 78
          + +IE+G++PFP   +T
Sbjct: 61 IKYIESGKVPFPNYRTT 76

[Close]

BLAST of MELO3C012508.2.1 vs. Swiss-Prot
Match: sp|Q6NNN0|RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-20
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S   S  WT  ENK FE+ALA YD+DTP+RW NVA+A+GGK+ E+V+RHY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VNHIENGQIPFP-YRNS 77
          VN IE+G+ P P YR++
Sbjct: 61 VNDIESGRYPHPNYRSN 77

[Close]

BLAST of MELO3C012508.2.1 vs. TrEMBL
Match: tr|A0A1S3BGF0|A0A1S3BGF0_CUCME (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.4e-39
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNSTRSSR 82
          VNHIENGQIPFPYRNSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]

BLAST of MELO3C012508.2.1 vs. TrEMBL
Match: tr|A0A0A0K3K0|A0A0A0K3K0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.3e-36
Identity = 76/81 (93.83%), Postives = 79/81 (97.53%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS+ WTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNSTRSSR 82
          VNHIE+GQIPFPYR STRSSR
Sbjct: 61 VNHIESGQIPFPYRKSTRSSR 81

[Close]

BLAST of MELO3C012508.2.1 vs. TrEMBL
Match: tr|A0A1S3BGF6|A0A1S3BGF6_CUCME (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.8e-30
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS  WTA +NKAFEKALA+YDKDTP+RWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V HIE+G++PFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of MELO3C012508.2.1 vs. TrEMBL
Match: tr|A0A0A0K344|A0A0A0K344_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.9e-29
Identity = 62/76 (81.58%), Postives = 72/76 (94.74%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS+SAHGS  WTA +NKAFE+ALA+YDKDTP+RWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V HIE+G++PFPYR+S
Sbjct: 61 VKHIESGKVPFPYRSS 76

[Close]

BLAST of MELO3C012508.2.1 vs. TrEMBL
Match: tr|A0A0A0K348|A0A0A0K348_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G170600 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-26
Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMS+HGS  WT  +NKAFEKALA+YD+DTP+RWLNVAKA+GGKT E+VKRHY LL+ED
Sbjct: 1  MASMSSHGSGTWTVTQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V  IE+GQ+PFPYR S
Sbjct: 61 VKFIESGQVPFPYRTS 76

The following BLAST results are available for this feature:

BLAST of MELO3C012508.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447026.1	8.1e-39	100.00	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
XP_011658943.1	6.5e-36	93.83	PREDICTED: protein RADIALIS-like 1 [Cucumis sativus] >KGN44073.1 hypothetical pr...	[more]
XP_008447025.1	1.2e-29	84.21	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
XP_022952660.1	4.5e-29	79.49	protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-li...	[more]
XP_004151116.1	5.8e-29	81.58	PREDICTED: protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical pr...	[more]

BLAST of MELO3C012508.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39250.1	6.2e-25	65.79	RAD-like 1	[more]
AT2G21650.1	9.0e-24	59.49	Homeodomain-like superfamily protein	[more]
AT1G75250.1	4.9e-22	57.32	RAD-like 6	[more]
AT1G19510.1	7.1e-21	58.33	RAD-like 5	[more]
AT2G18328.1	4.6e-20	59.74	RAD-like 4	[more]

BLAST of MELO3C012508.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JVB8\|RADL1_ARATH	1.1e-23	65.79	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
sp\|Q9SIJ5\|RADL2_ARATH	1.6e-22	59.49	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
sp\|Q1A173\|RADL6_ARATH	8.9e-21	57.32	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
sp\|Q58FS3\|RAD_ANTMA	8.9e-21	57.14	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
sp\|Q6NNN0\|RADL3_ARATH	2.0e-20	59.74	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]

BLAST of MELO3C012508.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGF0\|A0A1S3BGF0_CUCME	5.4e-39	100.00	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1	[more]
tr\|A0A0A0K3K0\|A0A0A0K3K0_CUCSA	4.3e-36	93.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1	[more]
tr\|A0A1S3BGF6\|A0A1S3BGF6_CUCME	7.8e-30	84.21	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]
tr\|A0A0A0K344\|A0A0A0K344_CUCSA	3.9e-29	81.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 SV=1	[more]
tr\|A0A0A0K348\|A0A0A0K348_CUCSA	1.1e-26	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G170600 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017884	SANT_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C012508.2	MELO3C012508.2	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C012508.2.1.exon.1	MELO3C012508.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C012508.2.1.CDS.1	MELO3C012508.2.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C012508.2.1	MELO3C012508.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 1.2E-8 score: 44.7
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 11..57 e-value: 1.7E-7 score: 31.2
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..58 e-value: 6.39792E-8 score: 43.333
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 4..71 e-value: 3.5E-21 score: 76.8
None	No IPR available	PANTHER	PTHR43952:SF14	PROTEIN RADIALIS-LIKE 1-RELATED	coord: 1..80
None	No IPR available	PANTHER	PTHR43952	FAMILY NOT NAMED	coord: 1..80
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 7..62 score: 10.852
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 10..66