MELO3C012350T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012350T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Iron-sulfur cluster insertion protein ErpA
Location	chr10 : 1096271 .. 1099169 (-)
Sequence length	905

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAAATTACGACGAATTGTAATTCAAGCAAATGCGTATATCGGAAAACACTCGAAAGTTGTAGTTTGCGGAGGAGAAAATTGATCGATAGGCAAAAAGAAGTGAGAAAATGGCAGCTTCTTCGTCTTCCTTTTTCGCCGCCGCTTCTCAGAAGGCCGGACCAGCCGTTCGCCGCCAAATTCTTACTCTCACGGAGGCAGCCGCCGCTAGAATTCGACAACTTCTTCAACAGCGCCAACGTCCATTCCTTCGTCTTGGCGTCAAGGCGCGCGGTTGTAATGGTTTATCCTATACTCTCAACTACGCAGGTCTGTAATAGCCTAATGAATTTCAACTTTTTATTGATTCTACGTAATTTCTCTTTTACCCATGTGATTGAATTTGTCGATTTTCTATCTCTTTTCTTTGAATCAGATTTTGATTTTGGATTTTATTGGAGATAAATAGGTATTTGGTGTATGTGAGCGATACAACCTAATAGTTTAGAGGAGATGTTTCGGAACTAGTCTTTTGGAAGATTTTTTTAAAAAATATTTGTACTGTTTCCAGCTCCAATTACCAAAATTAGGATTTTAAGACCGATGATCTATTATGATGATTAGCCGTAAAAAATTAAGAAGGTCAAATGATTCTGTAATTATTATAACCGGAATTGGGCATAGGTTGGTATGTAAGTTGTTCGGAGATGAGCTGCTGAGTTCTTACTAGCCGTAACAACGGCAAATCTGAACCATAAAACTTGACGTTCCTGAATGCATAAGTTGATAAAAAATCGATGATTTTACATACAGGGCCAGGGACCTATGTATGAGAGGAGAATTGACTTAACTACTTCAGTCTGTAAATTATTCTGTATCTTATAGAATCAGTTATGAATTAATGGTGCTATGGGACAGAGAGTTTGGATTCGATGATTTCCTTATCCAACCTATGGCACAGGGATTATTGTGTTATTGATATATCAGAATGTCAAACTAAATGCACGGTTCACCAAAATTTATGGTGAACATTTGCTTCCATCAAGTATCATTTAGATTGTGGTGTATGTTGGCTATTATGAGAACATAGCAGGATTGGGTATCGATTAAATTGACTTGAGAATCTTTGTCTCTCCCTCCTGCTATGGTTAATTATAATGTTATTAGACCAAAGTGCTATTTCTGTTCATTTAGAAGATAAATGGGTTGGCAATCCTCCATGGGTCAGCTGGAAGAGAATAGTTATTAACATGTTTGATGGTTGAAATTTGAGATTTTATACTCTTTGTGGCTTGGGATTTTTTATTGGTTGTGCTTATTTAATATGACTATCTTCTCTGTTAACAGTATTTATAATTTAGTTTTTTATGGAGTTGCTCATTATTGGAGAGTTATCTAACTTGGTATTACCTCAGTTTTTTTTCTCACATTATCGTTAACATTTTCTTTATGCAAGAAATAGGATTCATCCTTTATCTATGTTTGGCATAAATTGACTATAGTTACGATCTCTATCCTTTGAAATACTTTAAGATTGCAGTATTTCATTTAACAGTTTCCTTTTTCAAATATTTCAGATGAGAAAGGGAAGTTTGATGAGCTGGTTGAGGATCAAAATGTGAAAATACTGATCGATCCAAAGGCTCTAATGCACGTAATAGGAACAAAAATGGACTTTGTCGATGACAAATTAAGGTATTTGATAAATCTCTTTCCTAGAATTTTATTTATTCAGCTCTATATATCCATCCTTAAGTTGATGAACTATCCTGCTTGTTAATGACAACATCAGGCTGAAATGTAAAAGTTTGTGTACTTCTTATATTGAAACGTCCACAAGAGTTAGTGATGTAATTGCTCTAGTTAGGATTTATTGTGGGTTTGTATTAAGTCTATCATAGATACAAATTTCAAGGTTAGTTCTCAAGGTTAATTAATTCTTTTAATTATAATTAACTGGCTACCGGTTTTATCTTTCACGTGTAATCATTTTAGATCGTTGGAGTTGAGCTTATATATAAAGCTCCTCCATCTTCTTCAGTTTGGAGGTAATAATATCACAGGGGTTATTTCTTCAAGAAAATTCTCCAAGGTTTTGGATTAAATCACTTTGCTTTAGAGTGGATTTAGATCATCTTCAACACATCCACAAGCTGGTGAAAATAATTAATACAGCTTAAGAGAGAACTGTTAAGTTTATTTATTAGATTCAATTCATCTTAGTATAGCTATGTGGATAAGACACTCGGTACTAACTTAAAAGGATGATGGTTTGATCCTCTACCTTGCAATGGATGGACTTAAAAAAATTGTTCATTAGATTATGGTTATTTTGAGTCTCTATGTCAAATCAAATTCAAATTCAATTTTTTAACCTCTTGAACCACTATATTCAGTGGCCATTGAAACTTATCTTTTTTCTCTCTTTTCTCTTGTTGGTAGATCTGAGTTTATCTTTATCAATCCAAATTCCAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACAACAAGTAGTGCAGAAGCCAACAAAAAATGAGGCAGTTCGAGCAATGAGCGTTGTTTTTAAGAACTCAAAACTCACAGTTGCTGATTTGTTGTGTATTTTGCTGGAATTACAAGCACAATGATCAAGAGAGTTCTCTGACAACAACTTTAAACATTTGTAAGAATATTTCTATATTGGCTGATTATATTCTTAGAAAGCCAGTTAAGAGTTGTACTCTGCTAATTTTTTTTTCTTTAAAAATATTTTGTATGTATATTACTGTAGATTAAACTGGCTAATGAGTTATATATGAGAGCCTATAAGGTAATAAAATTCGCCCACGACTTTCTTTTTGTTAAAGTCATAGAACTTGGTAACTCGAGCATCTTGCTTGCCTTATCACTGGTTGAGTAATGAGAATGGTTTGTGTCC

mRNA sequence

AACAAAATTACGACGAATTGTAATTCAAGCAAATGCGTATATCGGAAAACACTCGAAAGTTGTAGTTTGCGGAGGAGAAAATTGATCGATAGGCAAAAAGAAGTGAGAAAATGGCAGCTTCTTCGTCTTCCTTTTTCGCCGCCGCTTCTCAGAAGGCCGGACCAGCCGTTCGCCGCCAAATTCTTACTCTCACGGAGGCAGCCGCCGCTAGAATTCGACAACTTCTTCAACAGCGCCAACGTCCATTCCTTCGTCTTGGCGTCAAGGCGCGCGGTTGTAATGGTTTATCCTATACTCTCAACTACGCAGATGAGAAAGGGAAGTTTGATGAGCTGGTTGAGGATCAAAATGTGAAAATACTGATCGATCCAAAGGCTCTAATGCACGTAATAGGAACAAAAATGGACTTTGTCGATGACAAATTAAGATCTGAGTTTATCTTTATCAATCCAAATTCCAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACAACAAGTAGTGCAGAAGCCAACAAAAAATGAGGCAGTTCGAGCAATGAGCGTTGTTTTTAAGAACTCAAAACTCACAGTTGCTGATTTGTTGTGTATTTTGCTGGAATTACAAGCACAATGATCAAGAGAGTTCTCTGACAACAACTTTAAACATTTGTAAGAATATTTCTATATTGGCTGATTATATTCTTAGAAAGCCAGTTAAGAGTTGTACTCTGCTAATTTTTTTTTCTTTAAAAATATTTTGTATGTATATTACTGTAGATTAAACTGGCTAATGAGTTATATATGAGAGCCTATAAGGTAATAAAATTCGCCCACGACTTTCTTTTTGTTAAAGTCATAGAACTTGGTAACTCGAGCATCTTGCTTGCCTTATCACTGGTTGAGTAATGAGAATGGTTTGTGTCC

Coding sequence (CDS)

ATGGCAGCTTCTTCGTCTTCCTTTTTCGCCGCCGCTTCTCAGAAGGCCGGACCAGCCGTTCGCCGCCAAATTCTTACTCTCACGGAGGCAGCCGCCGCTAGAATTCGACAACTTCTTCAACAGCGCCAACGTCCATTCCTTCGTCTTGGCGTCAAGGCGCGCGGTTGTAATGGTTTATCCTATACTCTCAACTACGCAGATGAGAAAGGGAAGTTTGATGAGCTGGTTGAGGATCAAAATGTGAAAATACTGATCGATCCAAAGGCTCTAATGCACGTAATAGGAACAAAAATGGACTTTGTCGATGACAAATTAAGATCTGAGTTTATCTTTATCAATCCAAATTCCAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACAACAAGTAGTGCAGAAGCCAACAAAAAATGA

Protein sequence

MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTTSSAEANKK*

Homology

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BLAST of MELO3C012350T2 vs. Swiss-Prot
Match: ISAM1_ARATH (Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g16710 PE=2 SV=2)

HSP 1 Score: 217.6 bits (553), Expect = 8.4e-56
Identity = 101/132 (76.52%), Postives = 119/132 (90.15%), Query Frame = 1


Query: 5   SSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLN 64
           +S   AAA+ + GPA+R+Q+LTLT+ AA+R+  LLQQRQ+PFLRLGVKARGCNGLSYTLN
Sbjct: 3   ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62

Query: 65  YADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 124
           YADEKGKFDELVE++ V+IL++PKALMHVIGTKMDFVDDKLRSEF+FINPNS+GQCGCGE
Sbjct: 63  YADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGE 122

Query: 125 SFMTTSSAEANK 137
           SFMTTS++ A +
Sbjct: 123 SFMTTSTSSAKQ 134

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BLAST of MELO3C012350T2 vs. Swiss-Prot
Match: ISAM3_ARATH (Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana GN=At2g36260 PE=3 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 6.2e-43
Identity = 81/110 (73.64%), Postives = 98/110 (89.09%), Query Frame = 1


Query: 20  VRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQ 79
           +R+Q+L L++ AAARIRQLLQ +Q+PFLRL V+A+GCNGLSY LNYA EKGKFDE+VE++
Sbjct: 1   MRKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEK 60

Query: 80  NVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 130
            VKIL+DPKA+MHVIGT+MDFVDDKLRSEF+F+NPN+  +CGCGESF TT
Sbjct: 61  GVKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109

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BLAST of MELO3C012350T2 vs. Swiss-Prot
Match: ISA1_YEAST (Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ISA1 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-28
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 1


Query: 21  RRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQN 80
           R+ ++TL+  A   +R LL Q +   +R+  + RGC+GL+Y L Y  E GKFDE+VE   
Sbjct: 143 RKALITLSPKAIKHLRALLAQPEPKLIRVSARNRGCSGLTYDLQYITEPGKFDEVVEQDG 202

Query: 81  VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFM 128
           VKI+ID KAL  +IG++MD++DDKL S+F+F NPNSKG CGCGESFM
Sbjct: 203 VKIVIDSKALFSIIGSEMDWIDDKLASKFVFKNPNSKGTCGCGESFM 249

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BLAST of MELO3C012350T2 vs. Swiss-Prot
Match: ISCA1_DROME (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster GN=l(1)G0136 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 62/106 (58.49%), Postives = 74/106 (69.81%), Query Frame = 1


Query: 22  RQILTLTEAAAARIRQLLQQRQRPF-LRLGVKARGCNGLSYTLNYADEKGKFDELVEDQN 81
           R  LTLT AA  RI+ LLQ +     L++GV+ RGCNGLSYTL+YA +K K DE V    
Sbjct: 23  RAALTLTPAAVLRIKTLLQDKPDMVGLKVGVRQRGCNGLSYTLDYASQKDKLDEEVVQDG 82

Query: 82  VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESF 127
           VK+ ID KA + ++GT+MDFV+ KL SEF+F NPN KG CGCGESF
Sbjct: 83  VKVFIDKKAQLSLLGTEMDFVESKLSSEFVFNNPNIKGTCGCGESF 128

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BLAST of MELO3C012350T2 vs. Swiss-Prot
Match: ISCA1_DICDI (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=isca1 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 54/118 (45.76%), Postives = 86/118 (72.88%), Query Frame = 1


Query: 15  KAGPAVRRQILTLTEAAAARIRQLLQQRQRPF---LRLGVKARGCNGLSYTLNYADEKGK 74
           K G   ++ I ++T++A  R+++++  ++      LRLG+K RGC+G+SYTL++A +K K
Sbjct: 8   KLGKPSKKAIFSMTDSALKRVKEIMNDKKIDNCIGLRLGIKERGCSGMSYTLDFATQKNK 67

Query: 75  FDE-LVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMT 129
           FDE +V D+++ I++D KAL+ VIGT+MD++++ ++ EFIFINPN+   CGCGESF T
Sbjct: 68  FDETVVADKDINIIVDSKALLSVIGTEMDYIEEPIKKEFIFINPNATNTCGCGESFTT 125

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BLAST of MELO3C012350T2 vs. TrEMBL
Match: A0A0A0KTF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614650 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.0e-68
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 1


Query: 1   MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQKAGPA RRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKAGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQNVKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTSSAEANKK 138
           GCGESFMTTSSAEANKK
Sbjct: 121 GCGESFMTTSSAEANKK 137

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BLAST of MELO3C012350T2 vs. TrEMBL
Match: A0A103Y9P2_CYNCS (FeS cluster biogenesis OS=Cynara cardunculus var. scolymus GN=Ccrd_016577 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-57
Identity = 113/133 (84.96%), Postives = 122/133 (91.73%), Query Frame = 1


Query: 4   SSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTL 63
           ++S   AAA+++ G A RRQ LTLTEAAA RIR LLQQRQRPFL+LGVKARGCNGLSYTL
Sbjct: 37  ATSKLAAAAAERLGTAARRQALTLTEAAAGRIRHLLQQRQRPFLKLGVKARGCNGLSYTL 96

Query: 64  NYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCG 123
           NYADEKGKFDEL+ED+ VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCG
Sbjct: 97  NYADEKGKFDELIEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCG 156

Query: 124 ESFMTTSSAEANK 137
           ESFMTTS+AEA K
Sbjct: 157 ESFMTTSTAEATK 169

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BLAST of MELO3C012350T2 vs. TrEMBL
Match: A0A067DZH9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032819mg PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.1e-57
Identity = 111/128 (86.72%), Postives = 120/128 (93.75%), Query Frame = 1


Query: 10  AAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEK 69
           AA+  K GPA+RRQ LTLTE+AA R+RQLL+QRQRPFLRLGVKARGCNGLSYTLNYADEK
Sbjct: 3   AASGSKVGPAIRRQALTLTESAAERLRQLLEQRQRPFLRLGVKARGCNGLSYTLNYADEK 62

Query: 70  GKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 129
            KFDE+VED+ VKILIDPKALMHVIGTKMDFVDDKLRSEF+FINPNSKGQCGCGESFMTT
Sbjct: 63  SKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTT 122

Query: 130 SSAEANKK 138
           SSAEA K+
Sbjct: 123 SSAEAAKR 130

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BLAST of MELO3C012350T2 vs. TrEMBL
Match: B8R1J7_EUCGR (Iron-sulfer cluster scaffold protein ISA1 (Fragment) OS=Eucalyptus grandis GN=ISA1 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.0e-57
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 1


Query: 1   MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAA S+S  AAA+ + G A RRQ+LT+T+AAA+RIR LLQQRQRPFLRLGVKARGCNGLS
Sbjct: 28  MAAPSASKLAAAADRFGSAARRQVLTVTDAAASRIRHLLQQRQRPFLRLGVKARGCNGLS 87

Query: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYAD KGKFDELVED+ +KIL++PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 88  YTLNYADSKGKFDELVEDKGIKILVEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 147

Query: 121 GCGESFMTTSSAEANKK 138
           GCGESFMTTS+++A K+
Sbjct: 148 GCGESFMTTSNSDAAKR 164

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BLAST of MELO3C012350T2 vs. TrEMBL
Match: A0A059AA55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00259 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.0e-57
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 1


Query: 1   MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAA S+S  AAA+ + G A RRQ+LT+T+AAA+RIR LLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAAPSASKLAAAADRFGSAARRQVLTVTDAAASRIRHLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYAD KGKFDELVED+ +KIL++PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADSKGKFDELVEDKGIKILVEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTSSAEANKK 138
           GCGESFMTTS+++A K+
Sbjct: 121 GCGESFMTTSNSDAAKR 137

[Close]

BLAST of MELO3C012350T2 vs. TAIR10
Match: AT2G16710.3 (AT2G16710.3 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 211.1 bits (536), Expect = 4.4e-55
Identity = 101/138 (73.19%), Postives = 119/138 (86.23%), Query Frame = 1


Query: 5   SSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLN 64
           +S   AAA+ + GPA+R+Q+LTLT+ AA+R+  LLQQRQ+PFLRLGVKARGCNGLSYTLN
Sbjct: 3   ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62

Query: 65  YA------DEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKG 124
           YA      DEKGKFDELVE++ V+IL++PKALMHVIGTKMDFVDDKLRSEF+FINPNS+G
Sbjct: 63  YAGKTSGNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQG 122

Query: 125 QCGCGESFMTTSSAEANK 137
           QCGCGESFMTTS++ A +
Sbjct: 123 QCGCGESFMTTSTSSAKQ 140

[Close]

BLAST of MELO3C012350T2 vs. TAIR10
Match: AT2G36260.1 (AT2G36260.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 174.9 bits (442), Expect = 3.5e-44
Identity = 81/110 (73.64%), Postives = 98/110 (89.09%), Query Frame = 1


Query: 20  VRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQ 79
           +R+Q+L L++ AAARIRQLLQ +Q+PFLRL V+A+GCNGLSY LNYA EKGKFDE+VE++
Sbjct: 1   MRKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEK 60

Query: 80  NVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 130
            VKIL+DPKA+MHVIGT+MDFVDDKLRSEF+F+NPN+  +CGCGESF TT
Sbjct: 61  GVKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109

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BLAST of MELO3C012350T2 vs. NCBI nr
Match: gi|659091836|ref|XP_008446757.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 1.7e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1


Query: 1   MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTSSAEANKK 138
           GCGESFMTTSSAEANKK
Sbjct: 121 GCGESFMTTSSAEANKK 137

[Close]

BLAST of MELO3C012350T2 vs. NCBI nr
Match: gi|449434502|ref|XP_004135035.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucumis sativus])

HSP 1 Score: 267.3 bits (682), Expect = 1.5e-68
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 1


Query: 1   MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAASSSSFFAAASQKAGPA RRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKAGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQNVKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTSSAEANKK 138
           GCGESFMTTSSAEANKK
Sbjct: 121 GCGESFMTTSSAEANKK 137

[Close]

BLAST of MELO3C012350T2 vs. NCBI nr
Match: gi|976920368|gb|KVI05099.1| (FeS cluster biogenesis [Cynara cardunculus var. scolymus])

HSP 1 Score: 229.9 bits (585), Expect = 2.6e-57
Identity = 113/133 (84.96%), Postives = 122/133 (91.73%), Query Frame = 1


Query: 4   SSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTL 63
           ++S   AAA+++ G A RRQ LTLTEAAA RIR LLQQRQRPFL+LGVKARGCNGLSYTL
Sbjct: 37  ATSKLAAAAAERLGTAARRQALTLTEAAAGRIRHLLQQRQRPFLKLGVKARGCNGLSYTL 96

Query: 64  NYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCG 123
           NYADEKGKFDEL+ED+ VKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCG
Sbjct: 97  NYADEKGKFDELIEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCG 156

Query: 124 ESFMTTSSAEANK 137
           ESFMTTS+AEA K
Sbjct: 157 ESFMTTSTAEATK 169

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BLAST of MELO3C012350T2 vs. NCBI nr
Match: gi|641825122|gb|KDO44407.1| (hypothetical protein CISIN_1g032819mg [Citrus sinensis])

HSP 1 Score: 229.2 bits (583), Expect = 4.4e-57
Identity = 111/128 (86.72%), Postives = 120/128 (93.75%), Query Frame = 1


Query: 10  AAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEK 69
           AA+  K GPA+RRQ LTLTE+AA R+RQLL+QRQRPFLRLGVKARGCNGLSYTLNYADEK
Sbjct: 3   AASGSKVGPAIRRQALTLTESAAERLRQLLEQRQRPFLRLGVKARGCNGLSYTLNYADEK 62

Query: 70  GKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 129
            KFDE+VED+ VKILIDPKALMHVIGTKMDFVDDKLRSEF+FINPNSKGQCGCGESFMTT
Sbjct: 63  SKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTT 122

Query: 130 SSAEANKK 138
           SSAEA K+
Sbjct: 123 SSAEAAKR 130

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BLAST of MELO3C012350T2 vs. NCBI nr
Match: gi|902173203|gb|KNA08235.1| (hypothetical protein SOVF_164410 [Spinacia oleracea])

HSP 1 Score: 228.8 bits (582), Expect = 5.8e-57
Identity = 110/132 (83.33%), Postives = 125/132 (94.70%), Query Frame = 1


Query: 6   SSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNY 65
           ++F A A++KAGP +RRQ L+L++AAA RI+QLLQQRQR FLRLGVKARGCNGLSYTLNY
Sbjct: 2   AAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNY 61

Query: 66  ADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 125
           ADEKGKFDEL+ED+ VKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES
Sbjct: 62  ADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 121

Query: 126 FMTTSSAEANKK 138
           FMTTSS+EA+K+
Sbjct: 122 FMTTSSSEASKQ 133

The following BLAST results are available for this feature:

BLAST of MELO3C012350T2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ISAM1_ARATH	8.4e-56	76.52	Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana ...	[more]
ISAM3_ARATH	6.2e-43	73.64	Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
ISA1_YEAST	1.9e-28	54.21	Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]
ISCA1_DROME	1.6e-27	58.49	Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster...	[more]
ISCA1_DICDI	1.1e-26	45.76	Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideu...	[more]

BLAST of MELO3C012350T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTF0_CUCSA	1.0e-68	98.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614650 PE=4 SV=1	[more]
A0A103Y9P2_CYNCS	1.8e-57	84.96	FeS cluster biogenesis OS=Cynara cardunculus var. scolymus GN=Ccrd_016577 PE=4 S...	[more]
A0A067DZH9_CITSI	3.1e-57	86.72	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032819mg PE=4 SV=1	[more]
B8R1J7_EUCGR	4.0e-57	81.02	Iron-sulfer cluster scaffold protein ISA1 (Fragment) OS=Eucalyptus grandis GN=IS...	[more]
A0A059AA55_EUCGR	4.0e-57	81.02	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00259 PE=4 SV=1	[more]

BLAST of MELO3C012350T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G16710.3	4.4e-55	73.19	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G36260.1	3.5e-44	73.64	Iron-sulphur cluster biosynthesis family protein	[more]

BLAST of MELO3C012350T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091836\|ref\|XP_008446757.1\|	1.7e-69	100.00	PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucumis melo...	[more]
gi\|449434502\|ref\|XP_004135035.1\|	1.5e-68	98.54	PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucumis sati...	[more]
gi\|976920368\|gb\|KVI05099.1\|	2.6e-57	84.96	FeS cluster biogenesis [Cynara cardunculus var. scolymus]	[more]
gi\|641825122\|gb\|KDO44407.1\|	4.4e-57	86.72	hypothetical protein CISIN_1g032819mg [Citrus sinensis]	[more]
gi\|902173203\|gb\|KNA08235.1\|	5.8e-57	83.33	hypothetical protein SOVF_164410 [Spinacia oleracea]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000361	FeS_biogenesis
IPR016092	FeS_cluster_insertion
IPR017870	FeS_cluster_insertion_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005198	structural molecule activity
GO:0051536	iron-sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016226	iron-sulfur cluster assembly

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005198	structural molecule activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C012350	MELO3C012350	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C012350T2	MELO3C012350T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C012350T2.cds3	MELO3C012350T2.cds3	CDS
MELO3C012350T2.cds2	MELO3C012350T2.cds2	CDS
MELO3C012350T2.cds1	MELO3C012350T2.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000361	FeS cluster biogenesis	GENE3D	G3DSA:2.60.300.12		coord: 24..117 score: 2.5
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 25..124 score: 2.8
IPR000361	FeS cluster biogenesis	unknown	SSF89360	HesB-like domain	coord: 24..117 score: 1.7
IPR016092	FeS cluster insertion protein	TIGRFAMs	TIGR00049	TIGR00049	coord: 25..127 score: 3.6
IPR017870	FeS cluster insertion, C-terminal, conserved site	PROSITE	PS01152	HESB	coord: 109..126 scor
None	No IPR available	PANTHER	PTHR10072	IRON-SULFUR CLUSTER ASSEMBLY PROTEIN	coord: 15..128 score: 7.4
None	No IPR available	PANTHER	PTHR10072:SF51	SUBFAMILY NOT NAMED	coord: 15..128 score: 7.4