MELO3C011446T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011446T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitogen-activated protein kinase
Location	chr3 : 23676677 .. 23676853 (+)
Sequence length	177

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTTCAGGTTGTTGCGATCAGGGATATCATACCTCCGCCTCTAAGGGAAACATTTAATGATGTTTATATCGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGGTTACATTCTGTACATGTGCTTGTTAG

mRNA sequence

ATGGTGTTTCAGGTTGTTGCGATCAGGGATATCATACCTCCGCCTCTAAGGGAAACATTTAATGATGTTTATATCGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGGTTACATTCTGTACATGTGCTTGTTAG

Coding sequence (CDS)

ATGGTGTTTCAGGTTGTTGCGATCAGGGATATCATACCTCCGCCTCTAAGGGAAACATTTAATGATGTTTATATCGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGGTTACATTCTGTACATGTGCTTGTTAG

Protein sequence

MVFQVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQVTFCTCAC*

Homology

[Close]

BLAST of MELO3C011446T1 vs. Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-18
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           +VAIRDIIPPPLR  FNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 122 IVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 167

[Close]

BLAST of MELO3C011446T1 vs. Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.3e-18
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           VVAIRDI+PPP RE FNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 114 VVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 159

[Close]

BLAST of MELO3C011446T1 vs. Swiss-Prot
Match: MPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.3e-18
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           VVAIRDI+PPP RE FNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 121 VVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 166

[Close]

BLAST of MELO3C011446T1 vs. Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.6e-18
Identity = 42/46 (91.30%), Postives = 42/46 (91.30%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           +VAIRDIIPPP RE FNDVYIAYELMDTDLHQIIRSNQ LSEEHCQ
Sbjct: 119 IVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQ 164

[Close]

BLAST of MELO3C011446T1 vs. Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.6e-18
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           +VAIRDIIPPP R +FNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 126 IVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 171

[Close]

BLAST of MELO3C011446T1 vs. TrEMBL
Match: A0A0A0KIN6_CUCSA (Mitogen-activated protein kinase OS=Cucumis sativus GN=Csa_6G365750 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.0e-17
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 131 VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 176

[Close]

BLAST of MELO3C011446T1 vs. TrEMBL
Match: A0A0E0DX52_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-17
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 1


Query: 3   FQVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQVTFC 55
           +Q+VAIRDIIPPP R +FNDVYIAYELMDTDLHQIIRSNQALSEEHCQ+  C
Sbjct: 66  YQIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHCQMVEC 117

[Close]

BLAST of MELO3C011446T1 vs. TrEMBL
Match: W9S488_9ROSA (Mitogen-activated protein kinase OS=Morus notabilis GN=L484_020377 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.3e-17
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQV 52
           VVAIRDIIPPP RETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ+
Sbjct: 125 VVAIRDIIPPPQRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQI 171

[Close]

BLAST of MELO3C011446T1 vs. TrEMBL
Match: M0SW93_MUSAM (Mitogen-activated protein kinase OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.0e-17
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           +VAIRDIIPPP+RETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 109 IVAIRDIIPPPVRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 154

[Close]

BLAST of MELO3C011446T1 vs. TrEMBL
Match: A0A067DWI5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0221321mg PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-17
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 1


Query: 4  QVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
          QVVAIRDIIPPP RE+FNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 2  QVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 48

[Close]

BLAST of MELO3C011446T1 vs. TAIR10
Match: AT2G43790.1 (AT2G43790.1 MAP kinase 6)

HSP 1 Score: 92.4 bits (228), Expect = 9.8e-20
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           +VAIRDIIPPPLR  FNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 122 IVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 167

[Close]

BLAST of MELO3C011446T1 vs. TAIR10
Match: AT3G45640.1 (AT3G45640.1 mitogen-activated protein kinase 3)

HSP 1 Score: 83.2 bits (204), Expect = 5.9e-17
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           ++AIRD++PPPLR  F+DVYI+ ELMDTDLHQIIRSNQ+LSEEHCQ
Sbjct: 97  IIAIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQSLSEEHCQ 142

[Close]

BLAST of MELO3C011446T1 vs. TAIR10
Match: AT4G01370.1 (AT4G01370.1 MAP kinase 4)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-15
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           V+A++DII PP RE FNDVYI YELMDTDLHQIIRSNQ L+++HC+
Sbjct: 102 VIAVKDIIKPPQRENFNDVYIVYELMDTDLHQIIRSNQPLTDDHCR 147

[Close]

BLAST of MELO3C011446T1 vs. TAIR10
Match: AT4G11330.1 (AT4G11330.1 MAP kinase 5)

HSP 1 Score: 73.6 bits (179), Expect = 4.7e-14
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           VV I+DII PP +E F DVYI +ELMDTDLHQIIRSNQ+L+++HCQ
Sbjct: 102 VVVIKDIIRPPKKEDFVDVYIVFELMDTDLHQIIRSNQSLNDDHCQ 147

[Close]

BLAST of MELO3C011446T1 vs. TAIR10
Match: AT1G07880.2 (AT1G07880.2 Protein kinase superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-12
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           V+ I+DII  P +E F DVYI YELMDTDLHQIIRS Q L+++HCQ
Sbjct: 92  VIKIKDIIELPEKERFEDVYIVYELMDTDLHQIIRSTQTLTDDHCQ 137

[Close]

BLAST of MELO3C011446T1 vs. NCBI nr
Match: gi|702505901|ref|XP_010039661.1| (PREDICTED: uncharacterized protein LOC104428359 [Eucalyptus grandis])

HSP 1 Score: 97.8 bits (242), Expect = 6.6e-18
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQVTFC 55
           VVAIRDIIPPP RE FNDVYIAYELMDTDLHQI RSNQALSEEHCQV+FC
Sbjct: 158 VVAIRDIIPPPQREVFNDVYIAYELMDTDLHQISRSNQALSEEHCQVSFC 207

[Close]

BLAST of MELO3C011446T1 vs. NCBI nr
Match: gi|659089396|ref|XP_008445484.1| (PREDICTED: mitogen-activated protein kinase homolog D5 isoform X2 [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-17
Identity = 47/50 (94.00%), Postives = 47/50 (94.00%), Query Frame = 1


Query: 1   MVFQVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           M   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 78  MKTSVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 127

[Close]

BLAST of MELO3C011446T1 vs. NCBI nr
Match: gi|449452881|ref|XP_004144187.1| (PREDICTED: mitogen-activated protein kinase homolog MMK1 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-17
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 131 VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 176

[Close]

BLAST of MELO3C011446T1 vs. NCBI nr
Match: gi|659089394|ref|XP_008445483.1| (PREDICTED: mitogen-activated protein kinase homolog MMK1 isoform X1 [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-17
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 51
           VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ
Sbjct: 131 VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ 176

[Close]

BLAST of MELO3C011446T1 vs. NCBI nr
Match: gi|703117367|ref|XP_010101362.1| (Mitogen-activated protein kinase-MMK1-like protein [Morus notabilis])

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-17
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 1


Query: 5   VVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQV 52
           VVAIRDIIPPP RETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQ+
Sbjct: 125 VVAIRDIIPPPQRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQI 171

The following BLAST results are available for this feature:

BLAST of MELO3C011446T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MPK6_ARATH	1.7e-18	93.48	Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1	[more]
MMK1_MEDSA	2.3e-18	93.48	Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV...	[more]
MPK_PEA	2.3e-18	93.48	Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1	[more]
NTF4_TOBAC	6.6e-18	91.30	Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 ...	[more]
MPK1_ORYSJ	6.6e-18	91.30	Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 ...	[more]

BLAST of MELO3C011446T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIN6_CUCSA	1.0e-17	100.00	Mitogen-activated protein kinase OS=Cucumis sativus GN=Csa_6G365750 PE=3 SV=1	[more]
A0A0E0DX52_9ORYZ	1.3e-17	84.62	Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1	[more]
W9S488_9ROSA	2.3e-17	95.74	Mitogen-activated protein kinase OS=Morus notabilis GN=L484_020377 PE=3 SV=1	[more]
M0SW93_MUSAM	3.0e-17	95.65	Mitogen-activated protein kinase OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
A0A067DWI5_CITSI	3.9e-17	95.74	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0221321mg PE=4 ...	[more]

BLAST of MELO3C011446T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43790.1	9.8e-20	93.48	MAP kinase 6	[more]
AT3G45640.1	5.9e-17	78.26	mitogen-activated protein kinase 3	[more]
AT4G01370.1	1.1e-15	73.91	MAP kinase 4	[more]
AT4G11330.1	4.7e-14	71.74	MAP kinase 5	[more]
AT1G07880.2	1.2e-12	67.39	Protein kinase superfamily protein	[more]

BLAST of MELO3C011446T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|702505901\|ref\|XP_010039661.1\|	6.6e-18	92.00	PREDICTED: uncharacterized protein LOC104428359 [Eucalyptus grandis]	[more]
gi\|659089396\|ref\|XP_008445484.1\|	1.1e-17	94.00	PREDICTED: mitogen-activated protein kinase homolog D5 isoform X2 [Cucumis melo]	[more]
gi\|449452881\|ref\|XP_004144187.1\|	1.5e-17	100.00	PREDICTED: mitogen-activated protein kinase homolog MMK1 [Cucumis sativus]	[more]
gi\|659089394\|ref\|XP_008445483.1\|	1.5e-17	100.00	PREDICTED: mitogen-activated protein kinase homolog MMK1 isoform X1 [Cucumis mel...	[more]
gi\|703117367\|ref\|XP_010101362.1\|	3.3e-17	95.74	Mitogen-activated protein kinase-MMK1-like protein [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004707	MAP kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C011446	MELO3C011446	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C011446T1	MELO3C011446T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C011446T1.cds1	MELO3C011446T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 6..54 score: 9.0
None	No IPR available	GENE3D	G3DSA:3.30.200.20		coord: 5..53 score: 2.
None	No IPR available	PANTHER	PTHR24055	MITOGEN-ACTIVATED PROTEIN KINASE	coord: 5..50 score: 2.9
None	No IPR available	PANTHER	PTHR24055:SF214	MITOGEN-ACTIVATED PROTEIN KINASE 3	coord: 5..50 score: 2.9