MELO3C010687T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C010687T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptioncyclin-dependent kinase D1;3
Locationchr3 : 29188257 .. 29188565 (-)
Sequence length309
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

mRNA sequence

ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

Coding sequence (CDS)

ATGGTGATTTCCGAAGACGAGCGCTGTTTGTTTCTGAAAATGAAGCCAAAGGTGGCGGATCGGACGGAGATGGATCTGGAGGAACAACCAACTACTCCAACCAGTGAAGAGTTTAGAATTGGCCGGCGAGTGCATAATTATTTGACATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTCGTACTACTCTACTCCACAATAATAATAATGTCGCCAAATACTTCACTACTTACTCGGAACTCCACGCCGCCTTCTTCGCCTCCACTTCATCATTTCCCTCTACCTAA

Protein sequence

MVISEDERCLFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPKSLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST*
Homology
[Close]
BLAST of MELO3C010687T1 vs. TrEMBL
Match: A0A0A0LNC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G349030 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.5e-36
Identity = 83/104 (79.81%), Postives = 88/104 (84.62%), Query Frame = 1 

Query: 1   MVISEDERC--LFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPK 60
           MVISEDERC  L +K+KPKVAD  EM   EQPTTPTSEEFRIGR VHNYL CPPPPRKPK
Sbjct: 1   MVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIGR-VHNYLACPPPPRKPK 60

Query: 61  SLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103
           SLPGPITMS TT+ +NNNN AKYFT+YSEL A FFASTS FPST
Sbjct: 61  SLPGPITMSFTTVHNNNNNGAKYFTSYSELQAFFFASTSPFPST 100

[Close]
BLAST of MELO3C010687T1 vs. NCBI nr
Match: gi|700207198|gb|KGN62317.1| (hypothetical protein Csa_2G349030 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 9.4e-36
Identity = 83/104 (79.81%), Postives = 88/104 (84.62%), Query Frame = 1 

Query: 1   MVISEDERC--LFLKMKPKVADRTEMDLEEQPTTPTSEEFRIGRRVHNYLTCPPPPRKPK 60
           MVISEDERC  L +K+KPKVAD  EM   EQPTTPTSEEFRIGR VHNYL CPPPPRKPK
Sbjct: 1   MVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIGR-VHNYLACPPPPRKPK 60

Query: 61  SLPGPITMSRTTLLHNNNNVAKYFTTYSELHAAFFASTSSFPST 103
           SLPGPITMS TT+ +NNNN AKYFT+YSEL A FFASTS FPST
Sbjct: 61  SLPGPITMSFTTVHNNNNNGAKYFTSYSELQAFFFASTSPFPST 100

The following BLAST results are available for this feature:
BLAST of MELO3C010687T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNC7_CUCSA6.5e-3679.81Uncharacterized protein OS=Cucumis sativus GN=Csa_2G349030 PE=4 SV=1[more]
BLAST of MELO3C010687T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207198|gb|KGN62317.1|9.4e-3679.81hypothetical protein Csa_2G349030 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C010687MELO3C010687gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C010687T1MELO3C010687T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C010687T1.cds1MELO3C010687T1.cds1CDS