MELO3C010016T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAACCAAATCGATCCATCTGAGAGATTGGATCCTGAAGTGGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACAACATTCGGTTGCTCATTAGCGAAGCATCGCAAATCTACTACATTGGAAGCAAAAGACATCCTTCTACATCTTGAAAAAAATTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTACAAATGATACTCACAGAGAACGTCTTGCAGCAGTAAAAAATCTATTGTGGCAAGCGAGATGGCAAGTACCAGAAGTTCTGCTGGACAGGCCGCTGGAAATACCAAAAGCAGTCTAA AGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAACCAAATCGATCCATCTGAGAGATTGGATCCTGAAGTGGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACAACATTCGGTTGCTCATTAGCGAAGCATCGCAAATCTACTACATTGGAAGCAAAAGACATCCTTCTACATCTTGAAAAAAATTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTACAAATGATACTCACAGAGAACGTCTTGCAGCAGTAAAAAATCTATTGTGGCAAGCGAGATGGCAAGTACCAGAAGTTCTGCTGGACAGGCCGCTGGAAATACCAAAAGCAGTCTAA ATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAACCAAATCGATCCATCTGAGAGATTGGATCCTGAAGTGGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACAACATTCGGTTGCTCATTAGCGAAGCATCGCAAATCTACTACATTGGAAGCAAAAGACATCCTTCTACATCTTGAAAAAAATTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTACAAATGATACTCACAGAGAACGTCTTGCAGCAGTAAAAAATCTATTGTGGCAAGCGAGATGGCAAGTACCAGAAGTTCTGCTGGACAGGCCGCTGGAAATACCAAAAGCAGTCTAA MEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVKNLLWQARWQVPEVLLDRPLEIPKAV*
BLAST of MELO3C010016T1 vs. Swiss-Prot
Match: TAF12_ARATH (Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana GN=TAF12 PE=1 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 4.0e-39 Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 1
BLAST of MELO3C010016T1 vs. Swiss-Prot
Match: TAF12_XENLA (Transcription initiation factor TFIID subunit 12 OS=Xenopus laevis GN=taf12 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 7.9e-27 Identity = 48/102 (47.06%), Postives = 80/102 (78.43%), Query Frame = 1
BLAST of MELO3C010016T1 vs. Swiss-Prot
Match: TAF12_MOUSE (Transcription initiation factor TFIID subunit 12 OS=Mus musculus GN=Taf12 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26 Identity = 47/102 (46.08%), Postives = 81/102 (79.41%), Query Frame = 1
BLAST of MELO3C010016T1 vs. Swiss-Prot
Match: TAF12_HUMAN (Transcription initiation factor TFIID subunit 12 OS=Homo sapiens GN=TAF12 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26 Identity = 47/102 (46.08%), Postives = 81/102 (79.41%), Query Frame = 1
BLAST of MELO3C010016T1 vs. Swiss-Prot
Match: TAF12_BOVIN (Transcription initiation factor TFIID subunit 12 OS=Bos taurus GN=TAF12 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26 Identity = 47/102 (46.08%), Postives = 81/102 (79.41%), Query Frame = 1
BLAST of MELO3C010016T1 vs. TrEMBL
Match: A0A0A0KEX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452070 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 9.9e-53 Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 1
BLAST of MELO3C010016T1 vs. TrEMBL
Match: M5WDV6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017159mg PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.1e-43 Identity = 87/106 (82.08%), Postives = 99/106 (93.40%), Query Frame = 1
BLAST of MELO3C010016T1 vs. TrEMBL
Match: A0A059A4S4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02056 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.6e-42 Identity = 84/106 (79.25%), Postives = 98/106 (92.45%), Query Frame = 1
BLAST of MELO3C010016T1 vs. TrEMBL
Match: A0A059A3M4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02056 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.6e-42 Identity = 84/106 (79.25%), Postives = 98/106 (92.45%), Query Frame = 1
BLAST of MELO3C010016T1 vs. TrEMBL
Match: W9RG68_9ROSA (Transcription initiation factor TFIID subunit 12 OS=Morus notabilis GN=L484_015424 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.6e-42 Identity = 84/106 (79.25%), Postives = 98/106 (92.45%), Query Frame = 1
BLAST of MELO3C010016T1 vs. TAIR10
Match: AT3G10070.1 (AT3G10070.1 TBP-associated factor 12) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-40 Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 1
BLAST of MELO3C010016T1 vs. TAIR10
Match: AT1G17440.1 (AT1G17440.1 Transcription initiation factor TFIID subunit A) HSP 1 Score: 120.2 bits (300), Expect = 9.9e-28 Identity = 58/108 (53.70%), Postives = 82/108 (75.93%), Query Frame = 1
BLAST of MELO3C010016T1 vs. NCBI nr
Match: gi|659125404|ref|XP_008462670.1| (PREDICTED: transcription initiation factor TFIID subunit 12 [Cucumis melo]) HSP 1 Score: 215.3 bits (547), Expect = 6.4e-53 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1
BLAST of MELO3C010016T1 vs. NCBI nr
Match: gi|778717464|ref|XP_011657696.1| (PREDICTED: transcription initiation factor TFIID subunit 12 isoform X2 [Cucumis sativus]) HSP 1 Score: 214.2 bits (544), Expect = 1.4e-52 Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 1
BLAST of MELO3C010016T1 vs. NCBI nr
Match: gi|778717461|ref|XP_011657695.1| (PREDICTED: transcription initiation factor TFIID subunit 12 isoform X1 [Cucumis sativus]) HSP 1 Score: 214.2 bits (544), Expect = 1.4e-52 Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 1
BLAST of MELO3C010016T1 vs. NCBI nr
Match: gi|659134063|ref|XP_008467013.1| (PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12-like, partial [Cucumis melo]) HSP 1 Score: 209.1 bits (531), Expect = 4.6e-51 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 1
BLAST of MELO3C010016T1 vs. NCBI nr
Match: gi|595814479|ref|XP_007203746.1| (hypothetical protein PRUPE_ppa017159mg [Prunus persica]) HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43 Identity = 87/106 (82.08%), Postives = 99/106 (93.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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