MELO3C008748T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGTTTGTCACGAGCACCGAAACATACATGGACTAAAGAGGAAGAAGAAAAATTTGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGGGGATGGAGGTCCGATAATGGGACATTTCAACCTGGGTACCTGGCCCAATTGCAACGAATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGAATCATCGACAATAGATTGTCATGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGATTAAGGTATTAATTTCATAATGCAATTATACGTATTTTTTATAATCACAATCATCAACTAATCTCCCTAAATTACATTTGTACAGAGTCATCCTGCAGCCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTCCTAATGTAGGATCTAATGTGTCGAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGTAAGTAAGAGGAAACGAGGTAGCGAACGTTATGAAACGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGCCAAAAGAGAAGCGTGCAATGGAGGTCGAAATGCGTGCTCAAGTTGTGAAACAACTGCAAGATATCCCTAAACTACGAAGCCAAGATAGGGCAAAGCTTATGCAAATCCTATTCCGTAGTTTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATATTGTTTAA ATGGCAAGTTTGTCACGAGCACCGAAACATACATGGACTAAAGAGGAAGAAGAAAAATTTGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGGGGATGGAGGTCCGATAATGGGACATTTCAACCTGGGTACCTGGCCCAATTGCAACGAATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGAATCATCGACAATAGATTGTCATGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGATTAAGAGTCATCCTGCAGCCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTCCTAATGTAGGATCTAATGTGTCGAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGTAAGTAAGAGGAAACGAGGTAGCGAACGTTATGAAACGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGCCAAAAGAGAAGCGTGCAATGGAGGTCGAAATGCGTGCTCAAGTTGTGAAACAACTGCAAGATATCCCTAAACTACGAAGCCAAGATAGGGCAAAGCTTATGCAAATCCTATTCCGTAGTTTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATATTGTTTAA ATGGCAAGTTTGTCACGAGCACCGAAACATACATGGACTAAAGAGGAAGAAGAAAAATTTGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGGGGATGGAGGTCCGATAATGGGACATTTCAACCTGGGTACCTGGCCCAATTGCAACGAATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGAATCATCGACAATAGATTGTCATGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGATTAAGAGTCATCCTGCAGCCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTCCTAATGTAGGATCTAATGTGTCGAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGTAAGTAAGAGGAAACGAGGTAGCGAACGTTATGAAACGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGCCAAAAGAGAAGCGTGCAATGGAGGTCGAAATGCGTGCTCAAGTTGTGAAACAACTGCAAGATATCCCTAAACTACGAAGCCAAGATAGGGCAAAGCTTATGCAAATCCTATTCCGTAGTTTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATATTGTTTAA MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQNIV*
BLAST of MELO3C008748T1 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 6.6e-92 Identity = 167/307 (54.40%), Postives = 228/307 (74.27%), Query Frame = 1
BLAST of MELO3C008748T1 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.7e-76 Identity = 143/283 (50.53%), Postives = 203/283 (71.73%), Query Frame = 1
BLAST of MELO3C008748T1 vs. TrEMBL
Match: E5GBB1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50 Identity = 101/128 (78.91%), Postives = 114/128 (89.06%), Query Frame = 1
BLAST of MELO3C008748T1 vs. TrEMBL
Match: A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.6e-37 Identity = 83/130 (63.85%), Postives = 102/130 (78.46%), Query Frame = 1
BLAST of MELO3C008748T1 vs. TrEMBL
Match: A0A0A9TMG5_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36 Identity = 69/145 (47.59%), Postives = 104/145 (71.72%), Query Frame = 1
BLAST of MELO3C008748T1 vs. TAIR10
Match: AT1G30140.1 (AT1G30140.1 unknown protein) HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08 Identity = 39/141 (27.66%), Postives = 69/141 (48.94%), Query Frame = 1
BLAST of MELO3C008748T1 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 621.3 bits (1601), Expect = 8.9e-175 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1
BLAST of MELO3C008748T1 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 345.5 bits (885), Expect = 9.5e-92 Identity = 167/307 (54.40%), Postives = 228/307 (74.27%), Query Frame = 1
BLAST of MELO3C008748T1 vs. NCBI nr
Match: gi|659113923|ref|XP_008456820.1| (PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo]) HSP 1 Score: 334.0 bits (855), Expect = 2.9e-88 Identity = 188/306 (61.44%), Postives = 214/306 (69.93%), Query Frame = 1
BLAST of MELO3C008748T1 vs. NCBI nr
Match: gi|659111565|ref|XP_008455793.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 310.1 bits (793), Expect = 4.4e-81 Identity = 147/159 (92.45%), Postives = 151/159 (94.97%), Query Frame = 1
BLAST of MELO3C008748T1 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 294.3 bits (752), Expect = 2.5e-76 Identity = 143/283 (50.53%), Postives = 203/283 (71.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
|