MELO3C008748 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008748
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr5 : 18436794 .. 18437794 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGTTTGTCACGAGCACCGAAACATACATGGACTAAAGAGGAAGAAGAAAAATTTGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGGGGATGGAGGTCCGATAATGGGACATTTCAACCTGGGTACCTGGCCCAATTGCAACGAATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGAATCATCGACAATAGATTGTCATGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGATTAAGGTATTAATTTCATAATGCAATTATACGTATTTTTTATAATCACAATCATCAACTAATCTCCCTAAATTACATTTGTACAGAGTCATCCTGCAGCCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTCCTAATGTAGGATCTAATGTGTCGAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGTAAGTAAGAGGAAACGAGGTAGCGAACGTTATGAAACGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGCCAAAAGAGAAGCGTGCAATGGAGGTCGAAATGCGTGCTCAAGTTGTGAAACAACTGCAAGATATCCCTAAACTACGAAGCCAAGATAGGGCAAAGCTTATGCAAATCCTATTCCGTAGTTTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATATTGTTTAA

mRNA sequence

ATGGCAAGTTTGTCACGAGCACCGAAACATACATGGACTAAAGAGGAAGAAGAAAAATTTGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGGGGATGGAGGTCCGATAATGGGACATTTCAACCTGGGTACCTGGCCCAATTGCAACGAATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGAATCATCGACAATAGATTGTCATGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGATTAAGAGTCATCCTGCAGCCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTCCTAATGTAGGATCTAATGTGTCGAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGTAAGTAAGAGGAAACGAGGTAGCGAACGTTATGAAACGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGCCAAAAGAGAAGCGTGCAATGGAGGTCGAAATGCGTGCTCAAGTTGTGAAACAACTGCAAGATATCCCTAAACTACGAAGCCAAGATAGGGCAAAGCTTATGCAAATCCTATTCCGTAGTTTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATATTGTTTAA

Coding sequence (CDS)

ATGGCAAGTTTGTCACGAGCACCGAAACATACATGGACTAAAGAGGAAGAAGAAAAATTTGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGGGGATGGAGGTCCGATAATGGGACATTTCAACCTGGGTACCTGGCCCAATTGCAACGAATGATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGAATCATCGACAATAGATTGTCATGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGATTAAGAGTCATCCTGCAGCCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTCCTAATGTAGGATCTAATGTGTCGAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGTAAGTAAGAGGAAACGAGGTAGCGAACGTTATGAAACGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGCCAAAAGAGAAGCGTGCAATGGAGGTCGAAATGCGTGCTCAAGTTGTGAAACAACTGCAAGATATCCCTAAACTACGAAGCCAAGATAGGGCAAAGCTTATGCAAATCCTATTCCGTAGTTTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATATTGTTTAA

Protein sequence

MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQNIV*

Homology

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BLAST of MELO3C008748 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 6.6e-92
Identity = 167/307 (54.40%), Postives = 228/307 (74.27%), Query Frame = 1


Query: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60
           M S SR PKHTWTKEEE   VECLVELV++GGWRSDNGTF+PGYL QL RMMA K+PG+N
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120
           I  +STID  +K +K+ +HA+AEMRGP+CSGFGWN+E +CI+AE+++FD W  SHPAAKG
Sbjct: 416 IH-ASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKG 475

Query: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFN----DTIPLGDSHDEDIPT 180
           LL+KSF +YD+LSYVFGKDRATG R+E+F ++GSN    ++    D +P     D D P 
Sbjct: 476 LLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMP-----DTDFPP 535

Query: 181 MYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAI 240
           MYS G++MSPD++   R  + SERRN SS SKRKR     ++ +++R+ +E+GNEQL  I
Sbjct: 536 MYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRI 595

Query: 241 ADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLE 300
           A+WP  +R    + R ++V+ L+ IP+L   DR +LM+IL R+++ ++ FL +P  +K  
Sbjct: 596 AEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYP 654

Query: 301 YCNILLQ 304
           YC+++LQ
Sbjct: 656 YCSLILQ 654

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BLAST of MELO3C008748 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.7e-76
Identity = 143/283 (50.53%), Postives = 203/283 (71.73%), Query Frame = 1


Query: 23  CLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIA 82
           C +ELVS GGW+SDNGTF+PGYLAQL RMMAEKL G  ++ ++ IDC +K+LK+T+ AIA
Sbjct: 340 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIA 399

Query: 83  EMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRAT 142
           EM GP+CSGFGWN+E +CI+AE++LFD+W++S PAAKGLL+  FPYYD+L+YVFG+DRAT
Sbjct: 400 EMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRAT 459

Query: 143 GARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRN 202
           G  +ETF +VGSN      D   +GD  +ED P +YS+GV +  D++   R  +ASE + 
Sbjct: 460 GRFAETFADVGSNEPGGGYDRFDMGDG-NEDFPPVYSRGVDILQDDVRASRPSRASEGKT 519

Query: 203 CSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIP 262
            SS SKRKRGS+R   VE I   ++  NEQL+ IA+WP    A +  +R +  + L+++P
Sbjct: 520 GSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMP 579

Query: 263 KLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQNI 306
           +L S DRA L + L   ++ + GF+ +P + +  +C +LL++I
Sbjct: 580 ELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDI 621

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BLAST of MELO3C008748 vs. TrEMBL
Match: E5GBB1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50
Identity = 101/128 (78.91%), Postives = 114/128 (89.06%), Query Frame = 1


Query: 159 MFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYET 218
           MFND +PLGDSHD+DIPTMYSQGVHM  +EMFGIRA QASERRNCSS SKRK+GSE YE 
Sbjct: 1   MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEM 60

Query: 219 VEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFR 278
           VEVI+S MEFGN+QLKA  DW K+K + EVE+ A+VVKQLQDIP+LRS+DRAKLMQILFR
Sbjct: 61  VEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDRAKLMQILFR 120

Query: 279 SLEAIEGF 287
           S+EAIEGF
Sbjct: 121 SVEAIEGF 128

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BLAST of MELO3C008748 vs. TrEMBL
Match: A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.6e-37
Identity = 83/130 (63.85%), Postives = 102/130 (78.46%), Query Frame = 1


Query: 177 MYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAI 236
           MYSQG+ M PDEM G R  Q+SE RNCSS SKRK G + YE V+VI + ME  N+QLKAI
Sbjct: 1   MYSQGLDMPPDEMLGTR--QSSEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAI 60

Query: 237 ADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLE 296
           A+W KEKRA EVE+  +VVKQLQDI +LR++DR KLMQI+F  ++ IEGFLS PT+LKLE
Sbjct: 61  ANWSKEKRATEVELHVEVVKQLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCPTKLKLE 120

Query: 297 YCNILLQNIV 307
           YC +LL++ V
Sbjct: 121 YCRVLLEDNV 128

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BLAST of MELO3C008748 vs. TrEMBL
Match: A0A0A9TMG5_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 69/145 (47.59%), Postives = 104/145 (71.72%), Query Frame = 1


Query: 4   LSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQE 63
           L++ PKH W++ E+E  V CLV L+  G W+++NG F  GYLAQL++ + E++P    + 
Sbjct: 12  LNKNPKHQWSQHEDEHLVHCLVRLIQEGSWKAENG-FCTGYLAQLEKWLHERIPTCEFKG 71

Query: 64  SSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLH 123
           +  ID  +K+LK+ +HAI EM  PS  GFGWN++ +CI+ ++D+FD+W+K HP+A+GL +
Sbjct: 72  NPHIDSRLKTLKRQFHAITEMLEPSAGGFGWNDKDKCIVCDKDIFDNWVKGHPSARGLSN 131

Query: 124 KSFPYYDDLSYVFGKDRATGARSET 149
           K FPY + LS VF KDRATG  +E+
Sbjct: 132 KPFPYLEKLSIVFVKDRATGEAAES 155

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BLAST of MELO3C008748 vs. TAIR10
Match: AT1G30140.1 (AT1G30140.1 unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08
Identity = 39/141 (27.66%), Postives = 69/141 (48.94%), Query Frame = 1


Query: 6   RAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMA--EKLPGTNIQE 65
           + P + WT +E     + L+EL+    WR  +G    G L    +++    K  G N   
Sbjct: 11  KGPYNQWTPDE----TDVLIELIRQN-WRDSSGII--GKLTVESKLLPALNKRLGCNKNH 70

Query: 66  SSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLH 125
            + +   +K LK  Y +  +++  S SGFGW+ E +   A  +++  ++K+HP  K +  
Sbjct: 71  KNYMS-RLKFLKNLYQSYLDLKRFS-SGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQT 130

Query: 126 KSFPYYDDLSYVFGKDRATGA 145
           +S  +++DL  +FG   ATG+
Sbjct: 131 ESIDHFEDLQIIFGDVVATGS 142

[Close]

BLAST of MELO3C008748 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 621.3 bits (1601), Expect = 8.9e-175
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1


Query: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60
           MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120
           IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180
           LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240
           GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI 300
           KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI 300

Query: 301 LLQNIV 307
           LLQNIV
Sbjct: 301 LLQNIV 306

[Close]

BLAST of MELO3C008748 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 345.5 bits (885), Expect = 9.5e-92
Identity = 167/307 (54.40%), Postives = 228/307 (74.27%), Query Frame = 1


Query: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60
           M S SR PKHTWTKEEE   VECLVELV++GGWRSDNGTF+PGYL QL RMMA K+PG+N
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120
           I  +STID  +K +K+ +HA+AEMRGP+CSGFGWN+E +CI+AE+++FD W  SHPAAKG
Sbjct: 416 IH-ASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKG 475

Query: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFN----DTIPLGDSHDEDIPT 180
           LL+KSF +YD+LSYVFGKDRATG R+E+F ++GSN    ++    D +P     D D P 
Sbjct: 476 LLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMP-----DTDFPP 535

Query: 181 MYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAI 240
           MYS G++MSPD++   R  + SERRN SS SKRKR     ++ +++R+ +E+GNEQL  I
Sbjct: 536 MYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRI 595

Query: 241 ADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLE 300
           A+WP  +R    + R ++V+ L+ IP+L   DR +LM+IL R+++ ++ FL +P  +K  
Sbjct: 596 AEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYP 654

Query: 301 YCNILLQ 304
           YC+++LQ
Sbjct: 656 YCSLILQ 654

[Close]

BLAST of MELO3C008748 vs. NCBI nr
Match: gi|659113923|ref|XP_008456820.1| (PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 2.9e-88
Identity = 188/306 (61.44%), Postives = 214/306 (69.93%), Query Frame = 1


Query: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60
           MAS SRA KH WTKEEE K VECLVELVS+GGWRSDNGTF+ GYL QLQRMMAEKLP TN
Sbjct: 1   MASSSRATKHAWTKEEEAKLVECLVELVSAGGWRSDNGTFRHGYLTQLQRMMAEKLPDTN 60

Query: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120
           IQ S TIDC         H  A  +G     F + ++            S++  +  A G
Sbjct: 61  IQGSPTIDCR-------SHPAA--KGLLHKSFPYYDDL-----------SYVFGNDGATG 120

Query: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180
              ++F              A G  + +         NMFND +PLGDSH++DI T+YSQ
Sbjct: 121 AHSETF--------------ADGGSNVS---------NMFNDGVPLGDSHNQDILTIYSQ 180

Query: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240
           GVHMS DE+FGIRAGQASERRN SS SKRKRGS+ YE VEVI S  EFGN+QLK I DWP
Sbjct: 181 GVHMSLDEIFGIRAGQASERRNYSSGSKRKRGSKHYEMVEVISSATEFGNDQLKTITDWP 240

Query: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI 300
           KEKRA EVE+R +VVKQLQDIP+LRSQDRAKLMQILFRS+EAIEGFLSIPT+LKLEYCNI
Sbjct: 241 KEKRATEVELRTEVVKQLQDIPQLRSQDRAKLMQILFRSVEAIEGFLSIPTKLKLEYCNI 263

Query: 301 LLQNIV 307
           LL+N V
Sbjct: 301 LLENNV 263

[Close]

BLAST of MELO3C008748 vs. NCBI nr
Match: gi|659111565|ref|XP_008455793.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 4.4e-81
Identity = 147/159 (92.45%), Postives = 151/159 (94.97%), Query Frame = 1


Query: 52  MAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 111
           MAEKLPGTNIQ S TIDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCII ERDLFDSW
Sbjct: 1   MAEKLPGTNIQASPTIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIVERDLFDSW 60

Query: 112 IKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHD 171
           +KSHPA KGLLHKSFPYYDDL+YVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSHD
Sbjct: 61  VKSHPATKGLLHKSFPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120

Query: 172 EDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 211
           EDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 121 EDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 159

[Close]

BLAST of MELO3C008748 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 294.3 bits (752), Expect = 2.5e-76
Identity = 143/283 (50.53%), Postives = 203/283 (71.73%), Query Frame = 1


Query: 23  CLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIA 82
           C +ELVS GGW+SDNGTF+PGYLAQL RMMAEKL G  ++ ++ IDC +K+LK+T+ AIA
Sbjct: 340 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIA 399

Query: 83  EMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRAT 142
           EM GP+CSGFGWN+E +CI+AE++LFD+W++S PAAKGLL+  FPYYD+L+YVFG+DRAT
Sbjct: 400 EMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRAT 459

Query: 143 GARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRN 202
           G  +ETF +VGSN      D   +GD  +ED P +YS+GV +  D++   R  +ASE + 
Sbjct: 460 GRFAETFADVGSNEPGGGYDRFDMGDG-NEDFPPVYSRGVDILQDDVRASRPSRASEGKT 519

Query: 203 CSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIP 262
            SS SKRKRGS+R   VE I   ++  NEQL+ IA+WP    A +  +R +  + L+++P
Sbjct: 520 GSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMP 579

Query: 263 KLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQNI 306
           +L S DRA L + L   ++ + GF+ +P + +  +C +LL++I
Sbjct: 580 ELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDI 621

The following BLAST results are available for this feature:

BLAST of MELO3C008748 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCB5_CUCME	6.6e-92	54.40	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GBB2_CUCME	1.7e-76	50.53	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GBB1_CUCME	2.8e-50	78.91	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KFW0_CUCSA	3.6e-37	63.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1	[more]
A0A0A9TMG5_ARUDO	2.3e-36	47.59	Uncharacterized protein OS=Arundo donax PE=4 SV=1	[more]

BLAST of MELO3C008748 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30140.1	5.3e-08	27.66	unknown protein	[more]

BLAST of MELO3C008748 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082641\|ref\|XP_008441954.1\|	8.9e-175	100.00	PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]	[more]
gi\|307136287\|gb\|ADN34114.1\|	9.5e-92	54.40	retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|659113923\|ref\|XP_008456820.1\|	2.9e-88	61.44	PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo]	[more]
gi\|659111565\|ref\|XP_008455793.1\|	4.4e-81	92.45	PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]	[more]
gi\|307135889\|gb\|ADN33754.1\|	2.5e-76	50.53	retrotransposon protein [Cucumis melo subsp. melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024752	Myb/SANT-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008748T1	MELO3C008748T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 12..107 score: 4.
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 9..297 score: 1.7
None	No IPR available	PANTHER	PTHR31704:SF16	SUBFAMILY NOT NAMED	coord: 9..297 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008748	Cucumber (Chinese Long) v2	cumeB133
MELO3C008748	Watermelon (Charleston Gray)	mewcgB367
MELO3C008748	Cucurbita pepo (Zucchini)	cpemeB102
MELO3C008748	Cucurbita pepo (Zucchini)	cpemeB777
MELO3C008748	Bottle gourd (USVL1VR-Ls)	lsimeB115
MELO3C008748	Cucumber (Gy14) v2	cgybmeB120
MELO3C008748	Silver-seed gourd	carmeB0004
MELO3C008748	Silver-seed gourd	carmeB0170
MELO3C008748	Cucumber (Chinese Long) v3	cucmeB141
MELO3C008748	Watermelon (97103) v2	mewmbB369
MELO3C008748	Wax gourd	mewgoB456
MELO3C008748	Cucumber (Gy14) v1	cgymeB320
MELO3C008748	Cucurbita maxima (Rimu)	cmameB175
MELO3C008748	Cucurbita maxima (Rimu)	cmameB737
MELO3C008748	Cucurbita moschata (Rifu)	cmomeB164
MELO3C008748	Cucurbita moschata (Rifu)	cmomeB725
MELO3C008748	Wild cucumber (PI 183967)	cpimeB139