MELO3C006932T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C006932T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Locationchr6 : 7478704 .. 7479124 (+)
Sequence length375
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTTATTGTTGTCGATGTCAAACCCAAGGTGCAAGCATTATCCAAGCAAGCCCATGTGAGTACATCAACTTGACATCTCGCTCTTACTCCTTGTCCGACAGTCGGACGTGGCACTCCGATCAAATCCCTCCACCAAGCATAAAGTAATCGCAAGTCCTCTCGTATCGCCAAGGACAAGCACGCCTAGACTATGCCAACAACAAGGTACAAGCATTATCCGACCAAGCCCATCCGAGTACATCAACTCGACATCCCGCTCTCACTCCCCACCGGACGATCGGACGTGGCACTCCAACGATGTCAACACCTCAAGCATATGTGCCCATGATAGGTGCAATGTGCTTGAAAGGTCGACGTCACGGCATAGGGGTACCTCCGCGCCCCGCCCATGCAGGCAGATCGCCCCTCCTATATAG

mRNA sequence

ATGACTTTTATTGTTGTCGATGTCAAACCCAAGGTGCAAGCATTATCCAAGCAAGCCCATTCGGACGTGGCACTCCGATCAAATCCCTCCACCAAGCATAAAGTAATCGCAAGTCCTCTCGTATCGCCAAGGACAAGCACGCCTAGACTATGCCAACAACAAGGTACAAGCATTATCCGACCAAGCCCATCCGAGTACATCAACTCGACATCCCGCTCTCACTCCCCACCGGACGATCGGACGTGGCACTCCAACGATGTCAACACCTCAAGCATATGTGCCCATGATAGGTGCAATGTGCTTGAAAGGTCGACGTCACGGCATAGGGGTACCTCCGCGCCCCGCCCATGCAGGCAGATCGCCCCTCCTATATAG

Coding sequence (CDS)

ATGACTTTTATTGTTGTCGATGTCAAACCCAAGGTGCAAGCATTATCCAAGCAAGCCCATTCGGACGTGGCACTCCGATCAAATCCCTCCACCAAGCATAAAGTAATCGCAAGTCCTCTCGTATCGCCAAGGACAAGCACGCCTAGACTATGCCAACAACAAGGTACAAGCATTATCCGACCAAGCCCATCCGAGTACATCAACTCGACATCCCGCTCTCACTCCCCACCGGACGATCGGACGTGGCACTCCAACGATGTCAACACCTCAAGCATATGTGCCCATGATAGGTGCAATGTGCTTGAAAGGTCGACGTCACGGCATAGGGGTACCTCCGCGCCCCGCCCATGCAGGCAGATCGCCCCTCCTATATAG

Protein sequence

MTFIVVDVKPKVQALSKQAHSDVALRSNPSTKHKVIASPLVSPRTSTPRLCQQQGTSIIRPSPSEYINSTSRSHSPPDDRTWHSNDVNTSSICAHDRCNVLERSTSRHRGTSAPRPCRQIAPPI*
Homology
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BLAST of MELO3C006932T1 vs. NCBI nr
Match: gi|1004041347|ref|WP_061496626.1| (hypothetical protein [Legionella pneumophila])

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-10
Identity = 45/96 (46.88%), Postives = 51/96 (53.12%), Query Frame = 1 

Query: 7   DVKPKVQALSKQAHSDVA-----------------LRSNPSTKHKVIASPLVSPRTSTPR 66
           D   KVQA SKQ H   +                  R NPSTK + I   LVS RTS P+
Sbjct: 59  DAHNKVQASSKQPHPSTSTRLPALTPHPTLGEKPTFRPNPSTKQEAIERHLVSSRTSNPK 118

Query: 67  LCQQQGTSIIRPSPSEYINSTSRSHSPPDDRTWHSN 86
              QQ  SII+ SPS+ INSTSRSHSPPD    HS+
Sbjct: 119 RHPQQSASIIQASPSKQINSTSRSHSPPDVGAQHSD 154

The following BLAST results are available for this feature:
BLAST of MELO3C006932T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1004041347|ref|WP_061496626.1|2.8e-1046.88hypothetical protein [Legionella pneumophila][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C006932MELO3C006932gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C006932T1MELO3C006932T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006932T1.cds1MELO3C006932T1.cds1CDS
MELO3C006932T1.cds2MELO3C006932T1.cds2CDS