MELO3C006932 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006932
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Locationchr6 : 7478704 .. 7479124 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTTATTGTTGTCGATGTCAAACCCAAGGTGCAAGCATTATCCAAGCAAGCCCATGTGAGTACATCAACTTGACATCTCGCTCTTACTCCTTGTCCGACAGTCGGACGTGGCACTCCGATCAAATCCCTCCACCAAGCATAAAGTAATCGCAAGTCCTCTCGTATCGCCAAGGACAAGCACGCCTAGACTATGCCAACAACAAGGTACAAGCATTATCCGACCAAGCCCATCCGAGTACATCAACTCGACATCCCGCTCTCACTCCCCACCGGACGATCGGACGTGGCACTCCAACGATGTCAACACCTCAAGCATATGTGCCCATGATAGGTGCAATGTGCTTGAAAGGTCGACGTCACGGCATAGGGGTACCTCCGCGCCCCGCCCATGCAGGCAGATCGCCCCTCCTATATAG

mRNA sequence

ATGACTTTTATTGTTGTCGATGTCAAACCCAAGGTGCAAGCATTATCCAAGCAAGCCCATTCGGACGTGGCACTCCGATCAAATCCCTCCACCAAGCATAAAGTAATCGCAAGTCCTCTCGTATCGCCAAGGACAAGCACGCCTAGACTATGCCAACAACAAGGTACAAGCATTATCCGACCAAGCCCATCCGAGTACATCAACTCGACATCCCGCTCTCACTCCCCACCGGACGATCGGACGTGGCACTCCAACGATGTCAACACCTCAAGCATATGTGCCCATGATAGGTGCAATGTGCTTGAAAGGTCGACGTCACGGCATAGGGGTACCTCCGCGCCCCGCCCATGCAGGCAGATCGCCCCTCCTATATAG

Coding sequence (CDS)

ATGACTTTTATTGTTGTCGATGTCAAACCCAAGGTGCAAGCATTATCCAAGCAAGCCCATTCGGACGTGGCACTCCGATCAAATCCCTCCACCAAGCATAAAGTAATCGCAAGTCCTCTCGTATCGCCAAGGACAAGCACGCCTAGACTATGCCAACAACAAGGTACAAGCATTATCCGACCAAGCCCATCCGAGTACATCAACTCGACATCCCGCTCTCACTCCCCACCGGACGATCGGACGTGGCACTCCAACGATGTCAACACCTCAAGCATATGTGCCCATGATAGGTGCAATGTGCTTGAAAGGTCGACGTCACGGCATAGGGGTACCTCCGCGCCCCGCCCATGCAGGCAGATCGCCCCTCCTATATAG

Protein sequence

MTFIVVDVKPKVQALSKQAHSDVALRSNPSTKHKVIASPLVSPRTSTPRLCQQQGTSIIRPSPSEYINSTSRSHSPPDDRTWHSNDVNTSSICAHDRCNVLERSTSRHRGTSAPRPCRQIAPPI*
Homology
[Close]
BLAST of MELO3C006932 vs. NCBI nr
Match: gi|1004041347|ref|WP_061496626.1| (hypothetical protein [Legionella pneumophila])

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-10
Identity = 45/96 (46.88%), Postives = 51/96 (53.12%), Query Frame = 1 

Query: 7   DVKPKVQALSKQAHSDVA-----------------LRSNPSTKHKVIASPLVSPRTSTPR 66
           D   KVQA SKQ H   +                  R NPSTK + I   LVS RTS P+
Sbjct: 59  DAHNKVQASSKQPHPSTSTRLPALTPHPTLGEKPTFRPNPSTKQEAIERHLVSSRTSNPK 118

Query: 67  LCQQQGTSIIRPSPSEYINSTSRSHSPPDDRTWHSN 86
              QQ  SII+ SPS+ INSTSRSHSPPD    HS+
Sbjct: 119 RHPQQSASIIQASPSKQINSTSRSHSPPDVGAQHSD 154

The following BLAST results are available for this feature:
BLAST of MELO3C006932 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1004041347|ref|WP_061496626.1|2.8e-1046.88hypothetical protein [Legionella pneumophila][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006932T1MELO3C006932T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006932Silver-seed gourdcarmeB0498
MELO3C006932Silver-seed gourdcarmeB0709
MELO3C006932Silver-seed gourdcarmeB0732
MELO3C006932Silver-seed gourdcarmeB0966
MELO3C006932Cucumber (Chinese Long) v3cucmeB236
MELO3C006932Cucumber (Chinese Long) v3cucmeB256
MELO3C006932Cucumber (Chinese Long) v3cucmeB415
MELO3C006932Watermelon (97103) v2mewmbB434
MELO3C006932Watermelon (97103) v2mewmbB437
MELO3C006932Wax gourdmewgoB541
MELO3C006932Melon (DHL92) v3.5.1memeB150
MELO3C006932Cucumber (Gy14) v1cgymeB142
MELO3C006932Cucumber (Gy14) v1cgymeB438
MELO3C006932Cucumber (Gy14) v1cgymeB497
MELO3C006932Cucurbita maxima (Rimu)cmameB296
MELO3C006932Cucurbita maxima (Rimu)cmameB375
MELO3C006932Cucurbita maxima (Rimu)cmameB579
MELO3C006932Cucurbita moschata (Rifu)cmomeB289
MELO3C006932Cucurbita moschata (Rifu)cmomeB368
MELO3C006932Cucurbita moschata (Rifu)cmomeB567
MELO3C006932Wild cucumber (PI 183967)cpimeB230
MELO3C006932Wild cucumber (PI 183967)cpimeB249
MELO3C006932Cucumber (Chinese Long) v2cumeB236
MELO3C006932Cucumber (Chinese Long) v2cumeB254
MELO3C006932Watermelon (Charleston Gray)mewcgB427
MELO3C006932Watermelon (Charleston Gray)mewcgB433
MELO3C006932Watermelon (97103) v1mewmB461
MELO3C006932Watermelon (97103) v1mewmB470
MELO3C006932Cucurbita pepo (Zucchini)cpemeB043
MELO3C006932Cucurbita pepo (Zucchini)cpemeB190
MELO3C006932Cucurbita pepo (Zucchini)cpemeB701
MELO3C006932Bottle gourd (USVL1VR-Ls)lsimeB375
MELO3C006932Bottle gourd (USVL1VR-Ls)lsimeB379
MELO3C006932Cucumber (Gy14) v2cgybmeB200
MELO3C006932Cucumber (Gy14) v2cgybmeB218
MELO3C006932Cucumber (Gy14) v2cgybmeB353