MELO3C006637T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006637T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4736938 .. 4738349 (-)
Sequence length	1412

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACCTCATCGGGTCTTTCTTCTCTCGTTGTTTCCCTCTCCTCTCTTCCCTTACCATAAACCTATTTTCGACCATTTTAAAACCCTAACCCCCTTCCTTCCTTCTTTGTTCTCTCTCGGTCTCCCGCTCCGTCGATCGCCGATGCTCCGCCGCCGACCATTTTTCTTTTCTGTTCTCTCATAGCTTCTTCCTCCTCTGTGGCATTTCTAGTTTCTCCCATTCTTCTTCTCCAGAAAGAACCAACAGGTCACTCTTCCTTCTCCTCCCAGTTTTTACACTCATGTCTAACTTATTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGACTAACCGGAAGGCTGTAATTGCGTTCCTTGCGGATTATGGATTCTCTGAATCACAAATCTCTAGTTTTCACAAGAGGTTTCCTCAAATTCTTTCTGCAAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAAATCCTTGGTGTTTAGCAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCGGTGCTTGGAAGTGAGAAGGCTCTCGCTACCATAAAACACTTTGCGAGTATTCTCGTTCGGGATCTTGGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTGGTTTTTAAAAGGCATCCATGGTGTATGGTGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGCAAAGGGTTTGATTAAGAAACACCAGAATCTTGTTTCGTTCTTTGAGTTTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCATAAAGAGCAGATTCCTGTATTGTTGGAGTTGTATGAAAAGAAATTAATGGATTATGGAAGATGAACAAGTTCGATCTCCTTGAAATTATAATATTTAACT

mRNA sequence

ATTACCTCATCGGGTCTTTCTTCTCTCGTTGTTTCCCTCTCCTCTCTTCCCTTACCATAAACCTATTTTCGACCATTTTAAAACCCTAACCCCCTTCCTTCCTTCTTTGTTCTCTCTCGGTCTCCCGCTCCGTCGATCGCCGATGCTCCGCCGCCGACCATTTTTCTTTTCTGTTCTCTCATAGCTTCTTCCTCCTCTGTGGCATTTCTAGTTTCTCCCATTCTTCTTCTCCAGAAAGAACCAACAGGTCACTCTTCCTTCTCCTCCCAGTTTTTACACTCATGTCTAACTTATTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGACTAACCGGAAGGCTGTAATTGCGTTCCTTGCGGATTATGGATTCTCTGAATCACAAATCTCTAGTTTTCACAAGAGGTTTCCTCAAATTCTTTCTGCAAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAAATCCTTGGTGTTTAGCAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCGGTGCTTGGAAGTGAGAAGGCTCTCGCTACCATAAAACACTTTGCGAGTATTCTCGTTCGGGATCTTGGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTGGTTTTTAAAAGGCATCCATGGTGTATGGTGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGCAAAGGGTTTGATTAAGAAACACCAGAATCTTGTTTCGTTCTTTGAGTTTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCATAAAGAGCAGATTCCTGTATTGTTGGAGTTGTATGAAAAGAAATTAATGGATTATGGAAGATGAACAAGTTCGATCTCCTTGAAATTATAATATTTAACT

Coding sequence (CDS)

ATGTCTAACTTATTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGACTAACCGGAAGGCTGTAATTGCGTTCCTTGCGGATTATGGATTCTCTGAATCACAAATCTCTAGTTTTCACAAGAGGTTTCCTCAAATTCTTTCTGCAAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAAATCCTTGGTGTTTAGCAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCGGTGCTTGGAAGTGAGAAGGCTCTCGCTACCATAAAACACTTTGCGAGTATTCTCGTTCGGGATCTTGGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTGGTTTTTAAAAGGCATCCATGGTGTATGGTGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGCAAAGGGTTTGATTAAGAAACACCAGAATCTTGTTTCGTTCTTTGAGTTTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCATAAAGAGCAGATTCCTGTATTGTTGGAGTTGTATGAAAAGAAATTAATGGATTATGGAAGATGA

Protein sequence

MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRKAVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEKALATIKHFASILVRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKLMDYGR*

Homology

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BLAST of MELO3C006637T1 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-78
Identity = 168/348 (48.28%), Postives = 229/348 (65.80%), Query Frame = 1


Query: 15  SPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK--AVIAFLADYGFS 74
           S + P G SQS   ++ YL  S  +  S + A  AS     +T  K  +V+AF   +GFS
Sbjct: 38  SSISPSGKSQS--FTVSYLIDSCGL--SHKDALSASKFFSFETPDKPNSVLAFFNSHGFS 97

Query: 75  ESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCLAASLNKRII 134
           +SQIS   K  P++L+++P+K LLPKL FF SKG S P++ K+V S P  L  SL  +II
Sbjct: 98  KSQISKIVKSLPRLLASDPDKTLLPKLQFFYSKGASRPDVAKIVVSTPGILYRSLENQII 157

Query: 135 PAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVPDSNILKYLQYQP 194
           P+F++ +  L S E A+  IK F+ IL+ DL   V  NI  L++ GVP SNI   L  +P
Sbjct: 158 PSFNFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINALQEFGVPKSNIAGLLMNRP 217

Query: 195 RVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEE 254
             F++    F+E +E V +MGFNP Q++FV+A+ A+RAM KSTW++K++ Y++WG SEEE
Sbjct: 218 MAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEE 277

Query: 255 IRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQ 314
           IRL F + P CM  SEDKI   MDFFVNK+G ESS +ARRP LI LSL+KR+ PR  V Q
Sbjct: 278 IRLAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQ 337

Query: 315 VLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           VLL+KGLIK   +LV  FE  EK F+ K +N  KE+ P L++LY++K+
Sbjct: 338 VLLSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLYQEKI 381

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BLAST of MELO3C006637T1 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77
Identity = 153/316 (48.42%), Postives = 217/316 (68.67%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S + A  AS  ++ +T  K  +V+AF   +GFS+SQ S   K  P++L+++P+K LLPKL
Sbjct: 67  SHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASIL 161
            FF SKG S P++ K+V S P  L  SL  +IIP+F++++  L S E A+  +K F+ IL
Sbjct: 127 QFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRIL 186

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + DL   V  N+  L++ GVP SNI   L Y+P  F++N   F++ +E V +MGFNP Q+
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQM 246

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +FV+A+ A+RA  +S W++K+++Y+KWG SEEEIRL F + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFV 306

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +A RP LI LSL+KR+ PR  V QVLL+KGLI K  +LV  FE  EK F+E
Sbjct: 307 NKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLE 366

Query: 342 KIINPHKEQIPVLLEL 355
           + +N +KE+ P L++L
Sbjct: 367 RFVNAYKEEAPQLIKL 382

[Close]

BLAST of MELO3C006637T1 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.8e-73
Identity = 151/321 (47.04%), Postives = 214/321 (66.67%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S + A  AS  V  +T  K  +V+A    +GFS++Q S   K+ PQ+L ++P+K LLPKL
Sbjct: 448 SHKDARSASKYVHFETPDKPNSVLALFNSHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKL 507

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEK-ALATIKHFASIL 161
            FF SKG S P+I K+V  +P  L  SL  +IIP+F++ +  L S+K A+  +K F+ IL
Sbjct: 508 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDFLQSDKMAITVVKRFSRIL 567

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + DL   V  N+  L++ GVP SNI   L  QP  F++    F+E +E V +MG NP Q+
Sbjct: 568 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKKMGSNPSQM 627

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +FV+A+ A+RA  KS+W++K+++Y++WG SEEEIRL F + PWCM+ SEDKI   MDFFV
Sbjct: 628 KFVIAIQAIRAGGKSSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 687

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL+KGLI K  +L + F+  E  F+ 
Sbjct: 688 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLISKDFSLSAVFQSTEIMFLH 747

Query: 342 KIINPHKEQIPVLLELYEKKL 360
           K ++ +KE+ P LL L  K++
Sbjct: 748 KFVDVYKEEAPQLLNLEHKEM 768

HSP 2 Score: 294.3 bits (752), Expect = 2.1e-76
Identity = 150/321 (46.73%), Postives = 219/321 (68.22%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S + A  AS  +  +   K  +V+AF   +GFS++Q S   K  PQ+L ++P+K LLPKL
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEK-ALATIKHFASIL 161
            FF SKG S P++ K+V S+P  +  SL  ++IP++++ +  L S+K A+  +K F+ IL
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + D+   V  N+  L++ GVP SNI   L+ QP  F++    F+E +E V +MGFNP Q+
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +FV+AV A+RA  KS+W++K+++Y+ WG SEEEIRL F + PWCM+ SEDKI   MDFFV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL+KGLI K  +L + F+  EK F+ 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

Query: 342 KIINPHKEQIPVLLELYEKKL 360
           K +N +KE+ P L++LY++K+
Sbjct: 364 KFVNVYKEEAPQLMKLYQEKI 384

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BLAST of MELO3C006637T1 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 3.5e-76
Identity = 155/321 (48.29%), Postives = 216/321 (67.29%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S ++A  AS  +  KT  K  +V AF   +GFSESQ S   +  PQ+L ++P+K LL KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEK-ALATIKHFASIL 161
            FF SKG S+P++VK++ S P  L  SL  +IIP+F++ +    SE+  +AT+K F+ +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + +  I V  NI  L++ GVP SNI   L  QPR F++    F+EI+E V +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +F  AV A+  M+KSTW++K++ Y++WG SEE+I L F + PWCM+ SEDKI   MDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +A RP LI LSL+KR+ PR  V QVLL+KGLI K  +LV  FE  EK F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KIINPHKEQIPVLLELYEKKL 360
           K +N +KE+ P LL LY++K+
Sbjct: 360 KFVNGYKEEAPQLLNLYQEKV 380

[Close]

BLAST of MELO3C006637T1 vs. TrEMBL
Match: A5C3X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.9e-74
Identity = 152/321 (47.35%), Postives = 215/321 (66.98%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S + A  AS  V  ++  K  +V+A    +GFS++Q S   K+ PQ+L ++P+K LLPKL
Sbjct: 67  SHKDARSASKYVHFESPDKPNSVLALFNSHGFSKTQTSKIXKKEPQLLLSDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEK-ALATIKHFASIL 161
            FF SKG S P+I K+V  +P  L  SL  +IIP+F++ +  L S+K A+  +K F+ IL
Sbjct: 127 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDXLQSDKMAITVVKRFSRIL 186

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + DL   V  N+  L++ GVP SNI   L  QP  F++    F+E +E V  MGFNP Q+
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKXMGFNPSQM 246

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +FV+A+ A+RA  K +W++K+++Y++WG SEEEIRL F + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVIAIQAIRAGGKXSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 306

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL+KGLI K  +L + F+  E  F+ 
Sbjct: 307 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLINKDFSLSAVFQSTEIMFLH 366

Query: 342 KIINPHKEQIPVLLELYEKKL 360
           K ++ +KE+ P LL LY++KL
Sbjct: 367 KFVDVYKEEAPQLLNLYQEKL 387

[Close]

BLAST of MELO3C006637T1 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-59
Identity = 127/331 (38.37%), Postives = 203/331 (61.33%), Query Frame = 1


Query: 29  SLRYLSTSSEIVSSPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQI 88
           +L YL  S  +  SP+SA +AS  + L +  +   V+  L D+GF+ +QISS  K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGS-E 148
           L AN E +LLPKL FF S G+S   + + + S+P  L  SL  ++IP+++++++VL S E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KALATIKHFASILVRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIV 208
           K +A ++    + + D   ++ PNI  + + GVP+  I   L + P   +  +  F+ I 
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNPQQLQFVVAVFALRAM-TKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMV 268
           ++  EMGFNPQ+  FV+A+ AL     KS WDK  EVY++WG SE++I   FK+HP CM+
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 VSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQN 328
           +SE KIN  M++FVN++      +A+ P ++  SL+KR+ PR  V +VL++ GL+K+  +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 LVSFFEFPEKRFIEKIINPHKEQIPVLLELY 356
           L S     EK F+EK++  ++E++P L+ LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of MELO3C006637T1 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 198.7 bits (504), Expect = 6.0e-51
Identity = 105/316 (33.23%), Postives = 189/316 (59.81%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S ESA   S  V+L +++K  +V+A   D+GF+  QI+S  K FP++LS +PE ++ PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEKALAT-IKHFASIL 161
           +FF S G S+ +  K++ S+P  L+ SL+KR+IP +D ++++L  E+++   +K      
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
              +   V   + I +++GVPD +I   +Q  P  F     RF E++ RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
            FV A+ A    ++S  ++K ++++ +G S+E+      R P C+ VS++KI   +++ V
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQ-NLVSFFEFPEKRFI 341
           N IG ++  +  RP ++SLS++KR+ PR  V  +LL+KGL+KK   N  +  +     F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 EKIINPHKEQIPVLLE 354
           +K +  +++++P L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of MELO3C006637T1 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 162.5 bits (410), Expect = 4.8e-40
Identity = 94/289 (32.53%), Postives = 163/289 (56.40%), Query Frame = 1


Query: 60  KAVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSN 119
           ++VI  L  Y FS++QI    +  P+++  N EKIL PKL FF+  G +   + K V  N
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 PWCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFAS--ILVRDLGISVGPNIEILKQI 179
              +  SL K++IP  + +++++  + + L  I       +L RD  + + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWD 239
           G+  S +   L+ QPR+F ++  + +  V R  ++GF       V AV +L ++++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 KKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALIS 299
           +KV+++   G SE+EI  + +R P  +  SEDK+    +F++ ++G E   +A+RP ++S
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 LSLKKRLNPRGYVYQVLLAKGLI----KKHQNLVSFFEFPEKRFIEKII 342
            +L+KR+ PR  V Q+L  KGL+    KK +N+V   E  E+ F+EK +
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

[Close]

BLAST of MELO3C006637T1 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 115.5 bits (288), Expect = 6.7e-26
Identity = 70/217 (32.26%), Postives = 121/217 (55.76%), Query Frame = 1


Query: 56  KTNRKAVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKL 115
           K N  +V+  L   GF +SQIS   + +P++L  + EK L PKL F +S+G SS E++++
Sbjct: 81  KVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEI 140

Query: 116 VCSNPWCLAASLNKRIIPAFDYIQAVLGSEKALATIKHFASILVRDLGISVGPNIEILKQ 175
           V + P  L     + +   +D+++ ++   K+L       S      G  +  NI +L++
Sbjct: 141 VSNVPTILDKKGEESVSLYYDFVKDIMQDGKSLCI-----SCPEGKKGNRIR-NISVLRE 200

Query: 176 IGVPDSNILKYL--QYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKS 235
           +GVP   +   L  +YQP   +    +F+E +++V +MGF+P + +FV A+  +  M++ 
Sbjct: 201 LGVPQKLLFSLLISRYQP---VCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEK 260

Query: 236 TWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKI 271
           T ++KV VY++ G SE EI  +FK+ P+ +  SE KI
Sbjct: 261 TIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

HSP 2 Score: 61.2 bits (147), Expect = 1.5e-09
Identity = 37/198 (18.69%), Postives = 92/198 (46.46%), Query Frame = 1


Query: 165 SVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAV 224
           ++   + + K++G  ++ I    +  P     +  +   + E + + G   ++   +++V
Sbjct: 252 TIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEE---IISV 311

Query: 225 FALRAMTKSTWDKKV----EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNK 284
              R     + ++K+    E++   G S ++ +++ KR+P C   S + +    +  V  
Sbjct: 312 LKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKM 371

Query: 285 IGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLI-KKHQNLVSFFEFPEKRFIEK 344
           +      V   P ++  SL+KR+ PR  V + L++KGLI  ++  + S     ++ F+++
Sbjct: 372 MNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKR 431

Query: 345 IINPHKEQIPVLLELYEK 358
            +  H + +P L+ ++ +
Sbjct: 432 YVMKHDKLVPKLMAIFNR 446

[Close]

BLAST of MELO3C006637T1 vs. TAIR10
Match: AT5G23930.1 (AT5G23930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 112.1 bits (279), Expect = 7.4e-25
Identity = 82/281 (29.18%), Postives = 135/281 (48.04%), Query Frame = 1


Query: 5   FRRILLLRSPSPVFPQGFSQ--SPLKSL-------RYLSTSSEIVSSPESAPLASNAVQL 64
           +R + LL   S  F + FS   +  K L       R   T S ++ S       + ++ +
Sbjct: 18  WRNLNLLLQNSSAFTESFSSVVTTTKDLSLEDERKRKTFTVSYLIDSLGLTTKLAESISM 77

Query: 65  KTN------RKAVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSS 124
           K N        +V+  L  YGF +SQISS    +P+ L  NPEK L  KL F +  G SS
Sbjct: 78  KANFDEKGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGASS 137

Query: 125 PEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEKALATIKHFASILVRDLGISVGPN 184
            E+ ++V   P  L     K I   +DY++ +L  + +       +S   +    +   N
Sbjct: 138 SELTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQDS-------SSSSSKRKQTNRNRN 197

Query: 185 IEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRA 244
           + +L+++GVP   +L  L  + +  +    RF+E V+++ EMGF+P+  +FV A++    
Sbjct: 198 VSVLRKLGVPQRLLLNLLISRAKP-VCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYE 257

Query: 245 MTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKI 271
           ++  T ++KV  Y + GLS  E+  VFK+ P+ +  SE  I
Sbjct: 258 LSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNI 290

HSP 2 Score: 69.3 bits (168), Expect = 5.5e-12
Identity = 32/119 (26.89%), Postives = 64/119 (53.78%), Query Frame = 1


Query: 237 KKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALIS 296
           K V+ + + G +++E+ ++ KRHP C+ ++ D +    +F V  +G     VA  P ++ 
Sbjct: 327 KSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLG 386

Query: 297 LSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELY 356
            SL+K + PR  V + L++ GLI +   + S    P+ +F++  +  H++ +P L  ++
Sbjct: 387 FSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKLFVEKHQDVLPELNSIF 445

HSP 3 Score: 36.2 bits (82), Expect = 5.2e-02
Identity = 24/73 (32.88%), Postives = 40/73 (54.79%), Query Frame = 1


Query: 237 KKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESS----FVARRP 296
           +K E  ++ GL++EE+ LV K++P C+  SE+KI  ++  F+ ++G         + R P
Sbjct: 292 QKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFL-ELGFTKDEVLMIIKRHP 351

Query: 297 ALISL---SLKKR 303
             I L   S+KK+
Sbjct: 352 QCIGLAADSVKKK 363

[Close]

BLAST of MELO3C006637T1 vs. NCBI nr
Match: gi|659076742|ref|XP_008438844.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X7 [Cucumis melo])

HSP 1 Score: 636.0 bits (1639), Expect = 4.2e-179
Identity = 329/365 (90.14%), Postives = 337/365 (92.33%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
           WCLAASLNKRIIPAFDYIQAVLGSE K LA IK+F SIL  DL ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  NSIRFKE VERVTEMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           KKRLNPRGYVYQVLL KGLIKK  N+  F    E RFI+K INPHKE+IP LLE YE+KL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 MDYGR 365
           MD  R
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006637T1 vs. NCBI nr
Match: gi|659076744|ref|XP_008438845.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X8 [Cucumis melo])

HSP 1 Score: 629.4 bits (1622), Expect = 3.9e-177
Identity = 323/365 (88.49%), Postives = 336/365 (92.05%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
           WCLAASLNKRIIPAFDYIQAVLGSE K L  IK+FA IL +DL ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVFL N IRFKE V+RVTEMGFNPQQLQFVVAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKING MDFFVNKIGCESSFVA RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           KKR+ PRGYVYQVLLAKGLIKKH ++  F +  EK FIEKII+PHKEQIP LLE YE+KL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDYGR 365
           MD  R
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006637T1 vs. NCBI nr
Match: gi|659076750|ref|XP_008438848.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo])

HSP 1 Score: 599.7 bits (1545), Expect = 3.3e-168
Identity = 314/365 (86.03%), Postives = 326/365 (89.32%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MSN+FRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLK  RK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVIA LAD+GFSESQISS  KR+PQILSANPEKILLPKLLFFQSKGLSSPEI KLVCS P
Sbjct: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
             LA SL+ RIIPAFDYIQAVLGSE K LA IK+F SIL  DL ISVGPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  NSIRFKE VERVTEMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           KKRLNPRGYVYQVLL KGLIKK  N+  F    E RFI+K INPHKE+IP LLE YE+KL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 MDYGR 365
           MD  R
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006637T1 vs. NCBI nr
Match: gi|659076740|ref|XP_008438843.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo])

HSP 1 Score: 590.5 bits (1521), Expect = 2.0e-165
Identity = 306/365 (83.84%), Postives = 325/365 (89.04%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MSN+FRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLK  RK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVIA LAD+GFSESQISS  KRFPQILSANPEKILLPKLLFF+SKGLSSPEI K+V S P
Sbjct: 61  AVIALLADHGFSESQISSIDKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
           + L+ SLN RIIPAFDYIQAVLGSE K L  IK+FA IL +DL ISVGPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVFL N IRFKE V+RVTEMGFNPQQLQFVVAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKING MDFFVNKIGCESSFVA RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           KKR+ PRGYVYQVLLAKGLIKKH ++  F +  EK FIEKII+PHKEQIP LLE YE+KL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDYGR 365
           MD  R
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006637T1 vs. NCBI nr
Match: gi|659077781|ref|XP_008439382.1| (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 2.3e-161
Identity = 305/366 (83.33%), Postives = 324/366 (88.52%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MS LFRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+ NRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVI  LA++GFS+SQIS   +R PQIL+ANPEKILLPKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
           + L  SLNKRII  FDYIQAVLGSE K LA IK FA IL RDL ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPRVF+I+SIRFKEIVERVTEMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHK-EQIPVLLELYEKK 360
           KKRLNPRGYVYQVLL KGLIKK  N+  F    EKRFIEK INPHK EQIP LLELY++K
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMDYGR 365
           LMD  R
Sbjct: 361 LMDSRR 366

The following BLAST results are available for this feature:

BLAST of MELO3C006637T1 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	1.3e-78	48.28	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
F6HDG2_VITVI	1.9e-77	48.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	4.8e-73	47.04	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
A5B1K5_VITVI	3.5e-76	48.29	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]
A5C3X9_VITVI	1.9e-74	47.35	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1	[more]

BLAST of MELO3C006637T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	1.6e-59	38.37	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	6.0e-51	33.23	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.8e-40	32.53	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	6.7e-26	32.26	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	7.4e-25	29.18	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006637T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076742\|ref\|XP_008438844.1\|	4.2e-179	90.14	PREDICTED: uncharacterized protein LOC103483819 isoform X7 [Cucumis melo]	[more]
gi\|659076744\|ref\|XP_008438845.1\|	3.9e-177	88.49	PREDICTED: uncharacterized protein LOC103483819 isoform X8 [Cucumis melo]	[more]
gi\|659076750\|ref\|XP_008438848.1\|	3.3e-168	86.03	PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo]	[more]
gi\|659076740\|ref\|XP_008438843.1\|	2.0e-165	83.84	PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo]	[more]
gi\|659077781\|ref\|XP_008439382.1\|	2.3e-161	83.33	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006637	MELO3C006637	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006637T1	MELO3C006637T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006637T1.cds1	MELO3C006637T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..222 score: 4.6E-21coord: 232..336 score: 4.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 253..284 score: 1.4coord: 285..319 score: 6.0coord: 184..214 score: 950.0coord: 148..179 score: 320.0coord: 113..145 score: 0.93coord: 77..108 score: 0
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..359 score: 2.2E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..359 score: 2.2E