MELO3C006637 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006637
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4736938 .. 4738349 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACCTCATCGGGTCTTTCTTCTCTCGTTGTTTCCCTCTCCTCTCTTCCCTTACCATAAACCTATTTTCGACCATTTTAAAACCCTAACCCCCTTCCTTCCTTCTTTGTTCTCTCTCGGTCTCCCGCTCCGTCGATCGCCGATGCTCCGCCGCCGACCATTTTTCTTTTCTGTTCTCTCATAGCTTCTTCCTCCTCTGTGGCATTTCTAGTTTCTCCCATTCTTCTTCTCCAGAAAGAACCAACAGGTCACTCTTCCTTCTCCTCCCAGTTTTTACACTCATGTCTAACTTATTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGACTAACCGGAAGGCTGTAATTGCGTTCCTTGCGGATTATGGATTCTCTGAATCACAAATCTCTAGTTTTCACAAGAGGTTTCCTCAAATTCTTTCTGCAAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAAATCCTTGGTGTTTAGCAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCGGTGCTTGGAAGTGAGAAGGCTCTCGCTACCATAAAACACTTTGCGAGTATTCTCGTTCGGGATCTTGGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTGGTTTTTAAAAGGCATCCATGGTGTATGGTGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGCAAAGGGTTTGATTAAGAAACACCAGAATCTTGTTTCGTTCTTTGAGTTTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCATAAAGAGCAGATTCCTGTATTGTTGGAGTTGTATGAAAAGAAATTAATGGATTATGGAAGATGAACAAGTTCGATCTCCTTGAAATTATAATATTTAACT

mRNA sequence

ATTACCTCATCGGGTCTTTCTTCTCTCGTTGTTTCCCTCTCCTCTCTTCCCTTACCATAAACCTATTTTCGACCATTTTAAAACCCTAACCCCCTTCCTTCCTTCTTTGTTCTCTCTCGGTCTCCCGCTCCGTCGATCGCCGATGCTCCGCCGCCGACCATTTTTCTTTTCTGTTCTCTCATAGCTTCTTCCTCCTCTGTGGCATTTCTAGTTTCTCCCATTCTTCTTCTCCAGAAAGAACCAACAGGTCACTCTTCCTTCTCCTCCCAGTTTTTACACTCATGTCTAACTTATTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGACTAACCGGAAGGCTGTAATTGCGTTCCTTGCGGATTATGGATTCTCTGAATCACAAATCTCTAGTTTTCACAAGAGGTTTCCTCAAATTCTTTCTGCAAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAAATCCTTGGTGTTTAGCAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCGGTGCTTGGAAGTGAGAAGGCTCTCGCTACCATAAAACACTTTGCGAGTATTCTCGTTCGGGATCTTGGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTGGTTTTTAAAAGGCATCCATGGTGTATGGTGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGCAAAGGGTTTGATTAAGAAACACCAGAATCTTGTTTCGTTCTTTGAGTTTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCATAAAGAGCAGATTCCTGTATTGTTGGAGTTGTATGAAAAGAAATTAATGGATTATGGAAGATGAACAAGTTCGATCTCCTTGAAATTATAATATTTAACT

Coding sequence (CDS)

ATGTCTAACTTATTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGACTAACCGGAAGGCTGTAATTGCGTTCCTTGCGGATTATGGATTCTCTGAATCACAAATCTCTAGTTTTCACAAGAGGTTTCCTCAAATTCTTTCTGCAAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAAATCCTTGGTGTTTAGCAGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCGGTGCTTGGAAGTGAGAAGGCTCTCGCTACCATAAAACACTTTGCGAGTATTCTCGTTCGGGATCTTGGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTGGTTTTTAAAAGGCATCCATGGTGTATGGTGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGCAAAGGGTTTGATTAAGAAACACCAGAATCTTGTTTCGTTCTTTGAGTTTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCATAAAGAGCAGATTCCTGTATTGTTGGAGTTGTATGAAAAGAAATTAATGGATTATGGAAGATGA

Protein sequence

MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRKAVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEKALATIKHFASILVRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKLMDYGR*

Homology

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BLAST of MELO3C006637 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-78
Identity = 168/348 (48.28%), Postives = 229/348 (65.80%), Query Frame = 1


Query: 15  SPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK--AVIAFLADYGFS 74
           S + P G SQS   ++ YL  S  +  S + A  AS     +T  K  +V+AF   +GFS
Sbjct: 38  SSISPSGKSQS--FTVSYLIDSCGL--SHKDALSASKFFSFETPDKPNSVLAFFNSHGFS 97

Query: 75  ESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCLAASLNKRII 134
           +SQIS   K  P++L+++P+K LLPKL FF SKG S P++ K+V S P  L  SL  +II
Sbjct: 98  KSQISKIVKSLPRLLASDPDKTLLPKLQFFYSKGASRPDVAKIVVSTPGILYRSLENQII 157

Query: 135 PAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVPDSNILKYLQYQP 194
           P+F++ +  L S E A+  IK F+ IL+ DL   V  NI  L++ GVP SNI   L  +P
Sbjct: 158 PSFNFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINALQEFGVPKSNIAGLLMNRP 217

Query: 195 RVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEE 254
             F++    F+E +E V +MGFNP Q++FV+A+ A+RAM KSTW++K++ Y++WG SEEE
Sbjct: 218 MAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEE 277

Query: 255 IRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQ 314
           IRL F + P CM  SEDKI   MDFFVNK+G ESS +ARRP LI LSL+KR+ PR  V Q
Sbjct: 278 IRLAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQ 337

Query: 315 VLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           VLL+KGLIK   +LV  FE  EK F+ K +N  KE+ P L++LY++K+
Sbjct: 338 VLLSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLYQEKI 381

[Close]

BLAST of MELO3C006637 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77
Identity = 153/316 (48.42%), Postives = 217/316 (68.67%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S + A  AS  ++ +T  K  +V+AF   +GFS+SQ S   K  P++L+++P+K LLPKL
Sbjct: 67  SHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASIL 161
            FF SKG S P++ K+V S P  L  SL  +IIP+F++++  L S E A+  +K F+ IL
Sbjct: 127 QFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRIL 186

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + DL   V  N+  L++ GVP SNI   L Y+P  F++N   F++ +E V +MGFNP Q+
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQM 246

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +FV+A+ A+RA  +S W++K+++Y+KWG SEEEIRL F + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFV 306

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +A RP LI LSL+KR+ PR  V QVLL+KGLI K  +LV  FE  EK F+E
Sbjct: 307 NKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLE 366

Query: 342 KIINPHKEQIPVLLEL 355
           + +N +KE+ P L++L
Sbjct: 367 RFVNAYKEEAPQLIKL 382

[Close]

BLAST of MELO3C006637 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.8e-73
Identity = 151/321 (47.04%), Postives = 214/321 (66.67%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S + A  AS  V  +T  K  +V+A    +GFS++Q S   K+ PQ+L ++P+K LLPKL
Sbjct: 448 SHKDARSASKYVHFETPDKPNSVLALFNSHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKL 507

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEK-ALATIKHFASIL 161
            FF SKG S P+I K+V  +P  L  SL  +IIP+F++ +  L S+K A+  +K F+ IL
Sbjct: 508 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDFLQSDKMAITVVKRFSRIL 567

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + DL   V  N+  L++ GVP SNI   L  QP  F++    F+E +E V +MG NP Q+
Sbjct: 568 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKKMGSNPSQM 627

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +FV+A+ A+RA  KS+W++K+++Y++WG SEEEIRL F + PWCM+ SEDKI   MDFFV
Sbjct: 628 KFVIAIQAIRAGGKSSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 687

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL+KGLI K  +L + F+  E  F+ 
Sbjct: 688 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLISKDFSLSAVFQSTEIMFLH 747

Query: 342 KIINPHKEQIPVLLELYEKKL 360
           K ++ +KE+ P LL L  K++
Sbjct: 748 KFVDVYKEEAPQLLNLEHKEM 768

HSP 2 Score: 294.3 bits (752), Expect = 2.1e-76
Identity = 150/321 (46.73%), Postives = 219/321 (68.22%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S + A  AS  +  +   K  +V+AF   +GFS++Q S   K  PQ+L ++P+K LLPKL
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEK-ALATIKHFASIL 161
            FF SKG S P++ K+V S+P  +  SL  ++IP++++ +  L S+K A+  +K F+ IL
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + D+   V  N+  L++ GVP SNI   L+ QP  F++    F+E +E V +MGFNP Q+
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +FV+AV A+RA  KS+W++K+++Y+ WG SEEEIRL F + PWCM+ SEDKI   MDFFV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL+KGLI K  +L + F+  EK F+ 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

Query: 342 KIINPHKEQIPVLLELYEKKL 360
           K +N +KE+ P L++LY++K+
Sbjct: 364 KFVNVYKEEAPQLMKLYQEKI 384

[Close]

BLAST of MELO3C006637 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 3.5e-76
Identity = 155/321 (48.29%), Postives = 216/321 (67.29%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S ++A  AS  +  KT  K  +V AF   +GFSESQ S   +  PQ+L ++P+K LL KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEK-ALATIKHFASIL 161
            FF SKG S+P++VK++ S P  L  SL  +IIP+F++ +    SE+  +AT+K F+ +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + +  I V  NI  L++ GVP SNI   L  QPR F++    F+EI+E V +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +F  AV A+  M+KSTW++K++ Y++WG SEE+I L F + PWCM+ SEDKI   MDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +A RP LI LSL+KR+ PR  V QVLL+KGLI K  +LV  FE  EK F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KIINPHKEQIPVLLELYEKKL 360
           K +N +KE+ P LL LY++K+
Sbjct: 360 KFVNGYKEEAPQLLNLYQEKV 380

[Close]

BLAST of MELO3C006637 vs. TrEMBL
Match: A5C3X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.9e-74
Identity = 152/321 (47.35%), Postives = 215/321 (66.98%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S + A  AS  V  ++  K  +V+A    +GFS++Q S   K+ PQ+L ++P+K LLPKL
Sbjct: 67  SHKDARSASKYVHFESPDKPNSVLALFNSHGFSKTQTSKIXKKEPQLLLSDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEK-ALATIKHFASIL 161
            FF SKG S P+I K+V  +P  L  SL  +IIP+F++ +  L S+K A+  +K F+ IL
Sbjct: 127 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDXLQSDKMAITVVKRFSRIL 186

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
           + DL   V  N+  L++ GVP SNI   L  QP  F++    F+E +E V  MGFNP Q+
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKXMGFNPSQM 246

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
           +FV+A+ A+RA  K +W++K+++Y++WG SEEEIRL F + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVIAIQAIRAGGKXSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 306

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIE 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL+KGLI K  +L + F+  E  F+ 
Sbjct: 307 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLINKDFSLSAVFQSTEIMFLH 366

Query: 342 KIINPHKEQIPVLLELYEKKL 360
           K ++ +KE+ P LL LY++KL
Sbjct: 367 KFVDVYKEEAPQLLNLYQEKL 387

[Close]

BLAST of MELO3C006637 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-59
Identity = 127/331 (38.37%), Postives = 203/331 (61.33%), Query Frame = 1


Query: 29  SLRYLSTSSEIVSSPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQI 88
           +L YL  S  +  SP+SA +AS  + L +  +   V+  L D+GF+ +QISS  K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGS-E 148
           L AN E +LLPKL FF S G+S   + + + S+P  L  SL  ++IP+++++++VL S E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KALATIKHFASILVRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIV 208
           K +A ++    + + D   ++ PNI  + + GVP+  I   L + P   +  +  F+ I 
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNPQQLQFVVAVFALRAM-TKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMV 268
           ++  EMGFNPQ+  FV+A+ AL     KS WDK  EVY++WG SE++I   FK+HP CM+
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 VSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQN 328
           +SE KIN  M++FVN++      +A+ P ++  SL+KR+ PR  V +VL++ GL+K+  +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 LVSFFEFPEKRFIEKIINPHKEQIPVLLELY 356
           L S     EK F+EK++  ++E++P L+ LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of MELO3C006637 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 198.7 bits (504), Expect = 6.0e-51
Identity = 105/316 (33.23%), Postives = 189/316 (59.81%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKTNRK--AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKL 101
           S ESA   S  V+L +++K  +V+A   D+GF+  QI+S  K FP++LS +PE ++ PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEKALAT-IKHFASIL 161
           +FF S G S+ +  K++ S+P  L+ SL+KR+IP +D ++++L  E+++   +K      
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 VRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQL 221
              +   V   + I +++GVPD +I   +Q  P  F     RF E++ RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFV 281
            FV A+ A    ++S  ++K ++++ +G S+E+      R P C+ VS++KI   +++ V
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKHQ-NLVSFFEFPEKRFI 341
           N IG ++  +  RP ++SLS++KR+ PR  V  +LL+KGL+KK   N  +  +     F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 EKIINPHKEQIPVLLE 354
           +K +  +++++P L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of MELO3C006637 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 162.5 bits (410), Expect = 4.8e-40
Identity = 94/289 (32.53%), Postives = 163/289 (56.40%), Query Frame = 1


Query: 60  KAVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSN 119
           ++VI  L  Y FS++QI    +  P+++  N EKIL PKL FF+  G +   + K V  N
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 PWCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFAS--ILVRDLGISVGPNIEILKQI 179
              +  SL K++IP  + +++++  + + L  I       +L RD  + + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWD 239
           G+  S +   L+ QPR+F ++  + +  V R  ++GF       V AV +L ++++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 KKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALIS 299
           +KV+++   G SE+EI  + +R P  +  SEDK+    +F++ ++G E   +A+RP ++S
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 LSLKKRLNPRGYVYQVLLAKGLI----KKHQNLVSFFEFPEKRFIEKII 342
            +L+KR+ PR  V Q+L  KGL+    KK +N+V   E  E+ F+EK +
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

[Close]

BLAST of MELO3C006637 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 115.5 bits (288), Expect = 6.7e-26
Identity = 70/217 (32.26%), Postives = 121/217 (55.76%), Query Frame = 1


Query: 56  KTNRKAVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKL 115
           K N  +V+  L   GF +SQIS   + +P++L  + EK L PKL F +S+G SS E++++
Sbjct: 81  KVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEI 140

Query: 116 VCSNPWCLAASLNKRIIPAFDYIQAVLGSEKALATIKHFASILVRDLGISVGPNIEILKQ 175
           V + P  L     + +   +D+++ ++   K+L       S      G  +  NI +L++
Sbjct: 141 VSNVPTILDKKGEESVSLYYDFVKDIMQDGKSLCI-----SCPEGKKGNRIR-NISVLRE 200

Query: 176 IGVPDSNILKYL--QYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKS 235
           +GVP   +   L  +YQP   +    +F+E +++V +MGF+P + +FV A+  +  M++ 
Sbjct: 201 LGVPQKLLFSLLISRYQP---VCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEK 260

Query: 236 TWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKI 271
           T ++KV VY++ G SE EI  +FK+ P+ +  SE KI
Sbjct: 261 TIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

HSP 2 Score: 61.2 bits (147), Expect = 1.5e-09
Identity = 37/198 (18.69%), Postives = 92/198 (46.46%), Query Frame = 1


Query: 165 SVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAV 224
           ++   + + K++G  ++ I    +  P     +  +   + E + + G   ++   +++V
Sbjct: 252 TIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEE---IISV 311

Query: 225 FALRAMTKSTWDKKV----EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNK 284
              R     + ++K+    E++   G S ++ +++ KR+P C   S + +    +  V  
Sbjct: 312 LKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKM 371

Query: 285 IGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLI-KKHQNLVSFFEFPEKRFIEK 344
           +      V   P ++  SL+KR+ PR  V + L++KGLI  ++  + S     ++ F+++
Sbjct: 372 MNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKR 431

Query: 345 IINPHKEQIPVLLELYEK 358
            +  H + +P L+ ++ +
Sbjct: 432 YVMKHDKLVPKLMAIFNR 446

[Close]

BLAST of MELO3C006637 vs. TAIR10
Match: AT5G23930.1 (AT5G23930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 112.1 bits (279), Expect = 7.4e-25
Identity = 82/281 (29.18%), Postives = 135/281 (48.04%), Query Frame = 1


Query: 5   FRRILLLRSPSPVFPQGFSQ--SPLKSL-------RYLSTSSEIVSSPESAPLASNAVQL 64
           +R + LL   S  F + FS   +  K L       R   T S ++ S       + ++ +
Sbjct: 18  WRNLNLLLQNSSAFTESFSSVVTTTKDLSLEDERKRKTFTVSYLIDSLGLTTKLAESISM 77

Query: 65  KTN------RKAVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSS 124
           K N        +V+  L  YGF +SQISS    +P+ L  NPEK L  KL F +  G SS
Sbjct: 78  KANFDEKGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGASS 137

Query: 125 PEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLGSEKALATIKHFASILVRDLGISVGPN 184
            E+ ++V   P  L     K I   +DY++ +L  + +       +S   +    +   N
Sbjct: 138 SELTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQDS-------SSSSSKRKQTNRNRN 197

Query: 185 IEILKQIGVPDSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRA 244
           + +L+++GVP   +L  L  + +  +    RF+E V+++ EMGF+P+  +FV A++    
Sbjct: 198 VSVLRKLGVPQRLLLNLLISRAKP-VCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYE 257

Query: 245 MTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKI 271
           ++  T ++KV  Y + GLS  E+  VFK+ P+ +  SE  I
Sbjct: 258 LSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNI 290

HSP 2 Score: 69.3 bits (168), Expect = 5.5e-12
Identity = 32/119 (26.89%), Postives = 64/119 (53.78%), Query Frame = 1


Query: 237 KKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALIS 296
           K V+ + + G +++E+ ++ KRHP C+ ++ D +    +F V  +G     VA  P ++ 
Sbjct: 327 KSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLG 386

Query: 297 LSLKKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELY 356
            SL+K + PR  V + L++ GLI +   + S    P+ +F++  +  H++ +P L  ++
Sbjct: 387 FSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKLFVEKHQDVLPELNSIF 445

HSP 3 Score: 36.2 bits (82), Expect = 5.2e-02
Identity = 24/73 (32.88%), Postives = 40/73 (54.79%), Query Frame = 1


Query: 237 KKVEVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESS----FVARRP 296
           +K E  ++ GL++EE+ LV K++P C+  SE+KI  ++  F+ ++G         + R P
Sbjct: 292 QKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFL-ELGFTKDEVLMIIKRHP 351

Query: 297 ALISL---SLKKR 303
             I L   S+KK+
Sbjct: 352 QCIGLAADSVKKK 363

[Close]

BLAST of MELO3C006637 vs. NCBI nr
Match: gi|659076742|ref|XP_008438844.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X7 [Cucumis melo])

HSP 1 Score: 636.0 bits (1639), Expect = 4.2e-179
Identity = 329/365 (90.14%), Postives = 337/365 (92.33%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
           WCLAASLNKRIIPAFDYIQAVLGSE K LA IK+F SIL  DL ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  NSIRFKE VERVTEMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           KKRLNPRGYVYQVLL KGLIKK  N+  F    E RFI+K INPHKE+IP LLE YE+KL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 MDYGR 365
           MD  R
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006637 vs. NCBI nr
Match: gi|659076744|ref|XP_008438845.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X8 [Cucumis melo])

HSP 1 Score: 629.4 bits (1622), Expect = 3.9e-177
Identity = 323/365 (88.49%), Postives = 336/365 (92.05%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
           WCLAASLNKRIIPAFDYIQAVLGSE K L  IK+FA IL +DL ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVFL N IRFKE V+RVTEMGFNPQQLQFVVAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKING MDFFVNKIGCESSFVA RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           KKR+ PRGYVYQVLLAKGLIKKH ++  F +  EK FIEKII+PHKEQIP LLE YE+KL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDYGR 365
           MD  R
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006637 vs. NCBI nr
Match: gi|659076750|ref|XP_008438848.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo])

HSP 1 Score: 599.7 bits (1545), Expect = 3.3e-168
Identity = 314/365 (86.03%), Postives = 326/365 (89.32%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MSN+FRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLK  RK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVIA LAD+GFSESQISS  KR+PQILSANPEKILLPKLLFFQSKGLSSPEI KLVCS P
Sbjct: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
             LA SL+ RIIPAFDYIQAVLGSE K LA IK+F SIL  DL ISVGPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  NSIRFKE VERVTEMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           KKRLNPRGYVYQVLL KGLIKK  N+  F    E RFI+K INPHKE+IP LLE YE+KL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 MDYGR 365
           MD  R
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006637 vs. NCBI nr
Match: gi|659076740|ref|XP_008438843.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo])

HSP 1 Score: 590.5 bits (1521), Expect = 2.0e-165
Identity = 306/365 (83.84%), Postives = 325/365 (89.04%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MSN+FRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLK  RK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVIA LAD+GFSESQISS  KRFPQILSANPEKILLPKLLFF+SKGLSSPEI K+V S P
Sbjct: 61  AVIALLADHGFSESQISSIDKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
           + L+ SLN RIIPAFDYIQAVLGSE K L  IK+FA IL +DL ISVGPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVFL N IRFKE V+RVTEMGFNPQQLQFVVAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKING MDFFVNKIGCESSFVA RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360
           KKR+ PRGYVYQVLLAKGLIKKH ++  F +  EK FIEKII+PHKEQIP LLE YE+KL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDYGR 365
           MD  R
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006637 vs. NCBI nr
Match: gi|659077781|ref|XP_008439382.1| (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 2.3e-161
Identity = 305/366 (83.33%), Postives = 324/366 (88.52%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60
           MS LFRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+ NRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120
           AVI  LA++GFS+SQIS   +R PQIL+ANPEKILLPKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180
           + L  SLNKRII  FDYIQAVLGSE K LA IK FA IL RDL ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPRVF+I+SIRFKEIVERVTEMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHK-EQIPVLLELYEKK 360
           KKRLNPRGYVYQVLL KGLIKK  N+  F    EKRFIEK INPHK EQIP LLELY++K
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMDYGR 365
           LMD  R
Sbjct: 361 LMDSRR 366

The following BLAST results are available for this feature:

BLAST of MELO3C006637 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	1.3e-78	48.28	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
F6HDG2_VITVI	1.9e-77	48.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	4.8e-73	47.04	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
A5B1K5_VITVI	3.5e-76	48.29	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]
A5C3X9_VITVI	1.9e-74	47.35	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1	[more]

BLAST of MELO3C006637 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	1.6e-59	38.37	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	6.0e-51	33.23	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.8e-40	32.53	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	6.7e-26	32.26	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	7.4e-25	29.18	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006637 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076742\|ref\|XP_008438844.1\|	4.2e-179	90.14	PREDICTED: uncharacterized protein LOC103483819 isoform X7 [Cucumis melo]	[more]
gi\|659076744\|ref\|XP_008438845.1\|	3.9e-177	88.49	PREDICTED: uncharacterized protein LOC103483819 isoform X8 [Cucumis melo]	[more]
gi\|659076750\|ref\|XP_008438848.1\|	3.3e-168	86.03	PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo]	[more]
gi\|659076740\|ref\|XP_008438843.1\|	2.0e-165	83.84	PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo]	[more]
gi\|659077781\|ref\|XP_008439382.1\|	2.3e-161	83.33	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU52327	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006637T1	MELO3C006637T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU52327	MU52327	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..222 score: 4.6E-21coord: 232..336 score: 4.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 253..284 score: 1.4coord: 285..319 score: 6.0coord: 184..214 score: 950.0coord: 148..179 score: 320.0coord: 113..145 score: 0.93coord: 77..108 score: 0
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..359 score: 2.2E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..359 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006637	CsaV3_3G014370	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006637	Cucumber (Gy14) v2	cgybmeB200
MELO3C006637	Silver-seed gourd	carmeB0610
MELO3C006637	Silver-seed gourd	carmeB0828
MELO3C006637	Cucumber (Chinese Long) v3	cucmeB510
MELO3C006637	Watermelon (97103) v2	mewmbB434
MELO3C006637	Watermelon (97103) v2	mewmbB448
MELO3C006637	Wax gourd	mewgoB521
MELO3C006637	Wax gourd	mewgoB529
MELO3C006637	Melon (DHL92) v3.5.1	memeB051
MELO3C006637	Cucumber (Gy14) v1	cgymeB307
MELO3C006637	Cucumber (Gy14) v1	cgymeB439
MELO3C006637	Cucurbita maxima (Rimu)	cmameB242
MELO3C006637	Cucurbita maxima (Rimu)	cmameB342
MELO3C006637	Cucurbita maxima (Rimu)	cmameB763
MELO3C006637	Cucurbita maxima (Rimu)	cmameB850
MELO3C006637	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006637	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006637	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006637	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006637	Wild cucumber (PI 183967)	cpimeB230
MELO3C006637	Wild cucumber (PI 183967)	cpimeB501
MELO3C006637	Cucumber (Chinese Long) v2	cumeB236
MELO3C006637	Cucumber (Chinese Long) v2	cumeB499
MELO3C006637	Watermelon (Charleston Gray)	mewcgB427
MELO3C006637	Watermelon (Charleston Gray)	mewcgB442
MELO3C006637	Watermelon (97103) v1	mewmB486
MELO3C006637	Watermelon (97103) v1	mewmB461
MELO3C006637	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006637	Cucurbita pepo (Zucchini)	cpemeB144
MELO3C006637	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006637	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006637	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006637	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006637	Bottle gourd (USVL1VR-Ls)	lsimeB369