MELO3C006598T2 (mRNA) Melon (DHL92) v3.5.1

NameMELO3C006598T2
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRNA-binding protein 1
Locationchr6 : 4457026 .. 4462148 (+)
Sequence length1280
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCTCACCGATCATGTCATGGGTGGACGTTTAAATCTTGAAGCGGTAGGGTTTAGGGCATGATTTTATCTCCAACCCGATCGTCTCCTTCCCTCCCTCCAAAATATTCGAAGCCCATCATTAGACTCATTTTCCTTCTCCCAAATTCCCATTAGGGTTAGGGTTCTCACTGCTTCAGTTTCCGAGTAAGACACGCTAATAACCCACTATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGTATTTCATGTTCTTCTTCGAGCTTTCTATGTTATTGATAATGTCTCGCGTTATTATTTTGATGGAGGAATTGAATGCCTCATTTGCTTTCATGTTTTTGTACATACTAGTGCACTTTTGTTTAGAATCTGGAATTTTGGGCAGGCTGTAAAGGGGTTTACCGTATGAATTTTGATTAGTAGGCATGTGAAGAGTTGATCAAAAAGAGCATTTGTTGCAAGTAATTTACTGTCAAGCCGTGTGCTATCGTGCTACATTGCATTATTTTCTCATTTCCCGTAGTCTATCCATTCTATTTACGAAGAGGAACGATTGAGTGTTTGCATTGTATACCATGCAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGTATGGCCGCTTTCATGTTAACATGTGCGCTCTTGGGTGTTGAAGAAATCACTTTATTATTTCCTGGTATTTTTTTCTCTTAATTATCGGGATATCCACACTAGATAACAGATTTTTGGCTATATTAGTTATGGAAGAAAACAGTTGAGAAAATCTTTGAGATTAAGTTGTGGGATCATAATTTCGGAGCACTGCTGAAGTTTTAACGATTAAATTTCCTTTACCATCATGTAATTATTTGGTTAAGATCGACAACAAGTCAATCTGAAAGAATGAAGGGTAAGTTTGCTGCATATAGAAGGAATCTGCAAATTTATCGGTTAACCTGAACTTTGTTTGTACTTAATCCTAGAAAGGATGAATTGACTGACAAGGAATTATTTGTAGGGGAATGATGTGTTTGTTAGTCTATAATAGCAGTGGTCAACAAGAAAGAAATTCTTGAAGCGTGTGTGAATTAGTTGAGTTGACAGTGGCTCTACATTAAATATGTGTCTAAAACTTAATACTGCCTGGCAACCCTTTCTGGTTATTACTTATTACAGAGATCTACTTTGCTTTCTCTCTCATTATGATATCTACTTAGCCTTCTCTCTCATTATGATATCATTCTCTTTATTGCCTATTTGTAGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGGTTCAATGACCTTCCTCTTAACCTCTAATCTTGCAGTATCGTTTGGTTGAATATCTTCTCCATGAAACCAGTATCTTTAACTTTGATCTATTATATTGATAGTCTCTTGTTTCTCATATACAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTGTTAGTGTCAATACATTTATCTTTTTTCTTTCTTTCTTTTTTGCTGACTTTCATGAAAATAATTGCATTGGCTTGATGATCTTTGATGTTATCATCGTGATGCAATATTGTAATTACACCCTTAATTTTTATTCTCAAGAAGCCTTTTGTATTTGACTGCAGCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGTTGGATCTTATTTATCATACTTGTTTTACTTCTAGCAAGACTAACATCATTATTGTCCTGCTTTTTTCCATCACTTCTTACTTCTGTACATTACTATGAATTTTGGTCGTTCCTGTCTTGATGTTTACTTGTTTAGTAAGCTGCACATGCCTTCTTTGAATTTTATAATTTAGTACTGTAACATGTCAAAGCATTCTTTTTGGATGAGAAGCATTGTATAATATTTTTGAAATTTTGTACTTGTCTTATATAGAATACCCAAACGCCAAACCCCCAAAATGGAAGTGCTTATTCCTTGTTTTAATTTTCAGTGGAACCAAAATGATTTTGTGTGTAAATTTAATGTACAATTAAGTTTATTTTGGGTGAAAATCATTTTTGTAGAAATATTTCGATATATTCAATGTAATTCTATTTTCGACCAGAACCTCAAGGCTTCGGTTTTGTCAAGAGCCTCTTAAATTTATCAATGGTGTTTCAATTTTAAGTACAAAATCCATTTCTAATGGATGAGCCATTTTTGCTCCTTTGTCATGTTGTGAAGTTCATAGTCAATATAAATAGTACTCTGCTGTGGTTTCTGAAATGGTAATAATCACTTTCGTCATTTTTATAATGACTCGAGAAATGCTTCTAATCATTTAAAATCAATTTTGTAGTCTGAAAAATGCATTTAAGAGAGAAAATTAAAAATTGAATTGATCTTGAGTGACTAAAGGTGTGTTTCAAAGTGATTTTAGTACATGACAAGGGATTTTAACAATTTCAAAATCACCCCCAAACATGCACTAAATAGTTTGACAACAATTGTGGCACTTCTAATCTTCATTTCCTCATTAGGTTTATAACATCAAATCTATATATTAATTCTAAGCAACAGTTTCAGTTTTTTGTTGTTTTACAAGCTTTAGTTGTAGAATTTTTATTTCATATGCTTGAATGTTATCATGGATAAGCAAAAACACAGAATTTAATGTTTGATTTGATGCACGTGGAATATTCTACTCCCTTCATGGTACAGAGTTGCATTGCAGGACATTGTATACAATCTACTTGATTCCTTGTTTATGCAGATATTAAAGTGTAAAGGGAGACTTTAAAGACTTGTTGATTAATAAAGTTTAACAAGAAAAGCGATCATAAAGTGATGGGCAACTTGCTTACTTTACCTATCGAACCCTCTCCATGAGTACAATCTATTACTTTTTTTAATTACGTTAGTTGCATGGTTTTTATTGTTTGTTTACATCTGTTTTGTTAGGCAGAAGTTGAGCATTGACGAGAGTTTTAAATCAAAATTTATCTCTGGTTCTTTTTTCCCCATTTTTCCTCCCTTACAAATCTCAACCATTTATCAGCAAGAAAGTGATCTTTAAGTTTGATATCTTCTTTTGCATATACTATCCAGTTAAGAAAGATTAGAGCTTATAGTTGGCCAAAGAAAGAAATCATCTTCAAAGGAGAAAAGGCCAAAGTTTTACTGGTTGTCGTATGGTGACATTGTCCAAGAAAAGATAATGTGTTTTTTAGAAAGTTGGGGCAAAGAGAGCTATGAACTTGTCAGAAGCTGATCAACCAGTACAGCTTAATAGAGCATAATTCTCAGTGTTTGGATCTACTTGTCATTATTTTGTTCGGAAACCTGAAAATGGTGCAGGTAAAAGTCATGTTTTAGTTGAACAGTTTTGAAAATGATGTTGATAGAAAATTGTGCTTATAAAAGTATGATCAAGTATCATAAGTACCTATTGAACGTACCTCATTGGGGCCTTTGAAGACTGCTTGGACAGGTTTTCTTTCCTGTTAGAGAGAGAGTTGGTTTTCTGTGTTTCAATTCTGAATGAAAACCGTTTCTGTTTGATATGTTGATTTTCATTATTTTTTTTCTGTTGTTGTGGATGATACAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGGTATTTTACCTTATGCTCCTTTACATCTTAAGTTTCCTTTTTTTTTTATCTCTGCATTTCTGAATAAGAGGATCTACACAGGGAACCGCGTATCACACGTGTTGGTACTGGTAGTTTCAGAATTCATGGTGATTCATTAAACTATATAAATAAGTGTTATATTATCGTTTCATTTTACCTTGGTGAGAGAGACCTATGGTAGGATAGACGTCTGATATGGAGGGCTAAGTTAATCTCCTAGAATATATAGATTGTTTACGATGGAGGATGAACAGAGCTTTATTTAATAAGCTCTCATGATTCGTGTTATTCTCACAGGTGTTTGTTGAATTTAATTGGTTAGAAGAGGCGAGAAAGAAATGACACATTTGGATGATTTGGTTTTTTGCTCCTTTGTTCAAGAATTTCTTTGGTTATCTGTTGATCTTGTAGAATTTAGTAAAACCCTTTGGAGAAATTTTAATTTATTTGCTAATGTTCACACTTAAATACAATATAAACTGGGGATGAGATTTGAGATCCCCTTGGTTAAGGGGGCAGCAAAGTACTCGACTGTTTTGTCATTATTGAACATTTCACATGGTCCAAAGTGTGTTGTGTTTAGGCAGTAATGCTTTCCTCTGGTTAATTGAAGAATTTAAAATTTTAACTAACACCCTGTAATGTTTACTTCTGCAGTCCTCGCTGATAGAGTTTTGGAATTGTGCGGTGATTCTGCTGCAGTCAGTCCTTGAGAATTGTTAAGTCTGCCTTCAGTTGTGGCCAGATGAACTATGCTATTCCATGCTTTGCAGTTTCTGTAAGGAATTTTATTTACATATGAAAGTAGGGAGGCGAGACTTGAGATATGGATTGAAGAACAATGAATGTTGACTTCATATGAATGCATGCTGATACACTTCTACTTGACCTTTACTAGATTTAGGATTTTGGCTTAAATTTCGTTTTTGTACTCTTGTATATACTCTGGTTGTATTTTTCAACTTAGTGGTCTTGTTCGTTTATCAGTTTT

mRNA sequence

AAATCTCACCGATCATGTCATGGGTGGACGTTTAAATCTTGAAGCGGTAGGGTTTAGGGCATGATTTTATCTCCAACCCGATCGTCTCCTTCCCTCCCTCCAAAATATTCGAAGCCCATCATTAGACTCATTTTCCTTCTCCCAAATTCCCATTAGGGTTAGGGTTCTCACTGCTTCAGTTTCCGAGTAAGACACGCTAATAACCCACTATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGTCCTCGCTGATAGAGTTTTGGAATTGTGCGGTGATTCTGCTGCAGTCAGTCCTTGAGAATTGTTAAGTCTGCCTTCAGTTGTGGCCAGATGAACTATGCTATTCCATGCTTTGCAGTTTCTGTAAGGAATTTTATTTACATATGAAAGTAGGGAGGCGAGACTTGAGATATGGATTGAAGAACAATGAATGTTGACTTCATATGAATGCATGCTGATACACTTCTACTTGACCTTTACTAGATTTAGGATTTTGGCTTAAATTTCGTTTTTGTACTCTTGTATATACTCTGGTTGTATTTTTCAACTTAGTGGTCTTGTTCGTTTATCAGTTTT

Coding sequence (CDS)

ATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGTCCTCGCTGA

Protein sequence

MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGSRSRSYSPR*
BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SRC28_ARATH (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana GN=SCL28 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 6.8e-72
Identity = 159/250 (63.60%), Postives = 179/250 (71.60%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MAR RSRSRSYSPR R R+PPR RK YDD+   R RE  S RD  S  PSGLL+RNLPLD
Sbjct: 1   MARARSRSRSYSPRPRDRSPPRERKGYDDN---RLRERPSSRDHESSGPSGLLIRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARP DLR  FERFGP+KD+YLP+NYYTGEPRGFGFVK+R+AEDAAEA +++NH VIGGRE
Sbjct: 61  ARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSRSSGR--SYRRRSPARSPRRRYRSYSRSPSPARHDSR-SR 180
           I IVFAEENRKTPQEMR T+ +SGR   Y+R S  RSPRRRYRS+SRS SP R +SR S+
Sbjct: 121 IAIVFAEENRKTPQEMRTTNGTSGRHGDYKRTS-HRSPRRRYRSHSRSRSPPRRESRHSK 180

Query: 181 GARDEYLSP-ARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRS 240
              D+  SP  RSRSIS S  PR+ ++Y        N RSPRE      R  +P   SR 
Sbjct: 181 VREDDLYSPRRRSRSISRSPLPRNEREYK-----SRNCRSPRE-----ERVLTPI-RSRC 235

Query: 241 PSGSRSRSYS 247
            S SRSRS S
Sbjct: 241 LSRSRSRSLS 235

BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SL30A_ARATH (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana GN=SCL30A PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.8e-47
Identity = 120/248 (48.39%), Postives = 145/248 (58.47%), Query Frame = 1

Query: 7   RSRSYSPRRRSRTPPRG--RKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPE 66
           R RSY+P     +PPRG  R+     PR R+  SR      S  P+ LLVRNL  D R E
Sbjct: 2   RGRSYTP-----SPPRGYGRRGRSPSPRGRFGGSRD-----SDLPTSLLVRNLRHDCRQE 61

Query: 67  DLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIV 126
           DLR PFE+FGPVKD+YLP++YYTG+PRGFGF++F    DAAEAK Q++  ++ GRE+ +V
Sbjct: 62  DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVV 121

Query: 127 FAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGARDEYL 186
           FAEENRK P EMR   R  GRS R +   RSP R    YSRSP P R   RSR     Y 
Sbjct: 122 FAEENRKKPTEMRTRDR-GGRSNRFQDRRRSPPR----YSRSP-PPRRGRRSRSRSRGYN 181

Query: 187 SPARSRSISHSRSPRDR-----QDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSG 246
           SP   R  S S SP+DR     + YSRSP    +          +S SRSP+   RS S 
Sbjct: 182 SPPAKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPR---RSVSP 230

Query: 247 SRSRSYSP 248
            ++RSY+P
Sbjct: 242 RKNRSYTP 230

BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SRC33_ARATH (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana GN=SCL33 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46
Identity = 126/258 (48.84%), Postives = 147/258 (56.98%), Query Frame = 1

Query: 7   RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDL 66
           R RSY+P     +PPRG  R    P  R R     RD     P+ LLVRNL  D R EDL
Sbjct: 2   RGRSYTP-----SPPRGYGRRGRSPSPRGRYGGRSRD----LPTSLLVRNLRHDCRQEDL 61

Query: 67  RIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFA 126
           R  FE+FGPVKD+YLP++YYTG+PRGFGFV+F    DAA+AK  ++  ++ GRE+ +VFA
Sbjct: 62  RKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 121

Query: 127 EENRKTPQEMRVTSRSSGR-SYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGARDEYLS 186
           EENRK P EMR   R  GR   RRR+P      RY S SRSP P R  SRSR    +Y S
Sbjct: 122 EENRKKPTEMRARERGGGRFRDRRRTPP-----RYYSRSRSPPPRRGRSRSRSG--DYYS 181

Query: 187 PARSRSISHSRSPRD-----RQDYSRSP-TPKDNGRSPREV---------DNARSRSRSP 246
           P   R    S SPR+     R+ YSRSP +    GRS   V            RS SRSP
Sbjct: 182 PPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPRRSISRSP 241

Query: 247 KGDSRSPSGSRSRSYSPR 249
           +  SRSPS  R+RS SPR
Sbjct: 242 R-RSRSPSPKRNRSVSPR 242


HSP 2 Score: 182.2 bits (461), Expect = 7.0e-45
Identity = 128/282 (45.39%), Postives = 152/282 (53.90%), Query Frame = 1

Query: 7   RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDL 66
           R RSY+P     +PPRG  R    P  R R     RD     P+ LLVRNL  D R EDL
Sbjct: 2   RGRSYTP-----SPPRGYGRRGRSPSPRGRYGGRSRD----LPTSLLVRNLRHDCRQEDL 61

Query: 67  RIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFA 126
           R  FE+FGPVKD+YLP++YYTG+PRGFGFV+F    DAA+AK  ++  ++ GRE+ +VFA
Sbjct: 62  RKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 121

Query: 127 EENRKTPQEMRVTSRSSGRSY-RRRSPAR-------SPRRRYRSYSRS-----PSPARHD 186
           EENRK P EMR   R  GR   RRR+P R        P RR RS SRS     P P RH 
Sbjct: 122 EENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHH 181

Query: 187 SR--------------------SRGARDEYLSPARSRSISHSRSPR----DRQDYSRSPT 246
            R                    S G+R   L+P R +S S S SPR         SRSP+
Sbjct: 182 PRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPRRSISRSPRRSRSPS 241

Query: 247 PKDN-GRSP-REVDNARSRSRSPKGDSRS--PSGSRSRSYSP 248
           PK N   SP R +  +  RSRSP+   RS  P  +RSRS SP
Sbjct: 242 PKRNRSVSPRRSISRSPRRSRSPRRSRRSYTPEPARSRSQSP 274

BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SRC30_ARATH (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana GN=SCL30 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.5e-42
Identity = 116/256 (45.31%), Postives = 135/256 (52.73%), Query Frame = 1

Query: 11  YSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPF 70
           YSP RR     RGR      PR  Y        RR  +   LLVRN+PLD RPE+LR PF
Sbjct: 9   YSPPRRGYGG-RGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPEELREPF 68

Query: 71  ERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENR 130
           ERFGPV+DVY+P++YY+G+PRGF FV+F  A DA EA++ +N     GREI +V A E+R
Sbjct: 69  ERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESR 128

Query: 131 KTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPAR-HDSRSRGARDEYLSPARS 190
           K P+EMRV +R+  R           R R RS SRS SP R  DSRSR  R    SPA  
Sbjct: 129 KRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSR-YRSRSYSPAPR 188

Query: 191 RSISHSRSPRDRQDYSRSPTPKDNGRS------PREVDN---------ARSRSRSPKGDS 249
           R     R   D     RS +P   G +       R  DN         A  R R  +  S
Sbjct: 189 RRGGPPRGEEDENYSRRSYSPGYEGAAAAAPDRDRNGDNEIREKPGYEAEDRRRGGRAVS 248


HSP 2 Score: 30.8 bits (68), Expect = 2.6e+01
Identity = 20/48 (41.67%), Postives = 24/48 (50.00%), Query Frame = 1

Query: 2   ARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAP 50
           +RYRSRS S +PRRR   PPRG    +D+   R   S  +    + AP
Sbjct: 174 SRYRSRSYSPAPRRRG-GPPRGE---EDENYSRRSYSPGYEGAAAAAP 217

BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SRS12_HUMAN (Serine/arginine-rich splicing factor 12 OS=Homo sapiens GN=SRSF12 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.0e-28
Identity = 81/204 (39.71%), Postives = 111/204 (54.41%), Query Frame = 1

Query: 47  PAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAE 106
           P  + L +RN+    RPEDLR  F R+GP+ DVY+P ++YT  PRGF +V+F    DA +
Sbjct: 7   PPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAED 66

Query: 107 AKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSR--SSGRSYRRRSPARSPRRRYRSYS 166
           A   LN   + GR+I I FA+ +RKTP +M+   R   S   +RR   +RSP +R R+ S
Sbjct: 67  ALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERHPCSPSDHRR---SRSPSQR-RTRS 126

Query: 167 RSPSPARHDSRSRGARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNAR 226
           RS S  R+  RS     + L  +R R  S+S+S    +   R  T     R+PR    +R
Sbjct: 127 RSSSWGRNRRRS-----DSLKESRHRRFSYSQSKSRSKSLPRRSTSARQSRTPRRNFGSR 186

Query: 227 SRSRSPKGDSRSPSGSRSRSYSPR 249
            RSRS     RS S  +S+S SP+
Sbjct: 187 GRSRSKSLQKRSKSIGKSQSSSPQ 201

BLAST of MELO3C006598T2 vs. TrEMBL
Match: M5XS42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010343mg PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 3.1e-116
Identity = 214/252 (84.92%), Postives = 230/252 (91.27%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRS+RDRRSPAPSGLLVRNLPLD
Sbjct: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSYRDRRSPAPSGLLVRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+R+AEDAAEAKQQLNH+VIGGRE
Sbjct: 61  ARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHSVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSRSSGR---SYRRRSPARSPRRRYRSYSRSPSPARHDSRSR 180
           IRIVFAEENRKTPQEMR T+R SGR   S RRR+P RSPRR+YRSYSRSPSP R DSR R
Sbjct: 121 IRIVFAEENRKTPQEMRTTTRVSGRYGGSSRRRTPPRSPRRQYRSYSRSPSPVRRDSRDR 180

Query: 181 GARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPR-EVDNARSRSRSPKGDSRS 240
           GARD+Y SP +SRSIS S SPRD +DY RSP+P++NGRSPR E D A SRSRS +G+SRS
Sbjct: 181 GARDDYRSPVQSRSISRSPSPRDGRDYRRSPSPRENGRSPRDERDYAPSRSRSLRGNSRS 240

Query: 241 PSGSRSRSYSPR 249
           PS SRSRSYSPR
Sbjct: 241 PSRSRSRSYSPR 252

BLAST of MELO3C006598T2 vs. TrEMBL
Match: M5Y9H7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010343mg PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.5e-115
Identity = 215/253 (84.98%), Postives = 231/253 (91.30%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRS+RDRRSPAPSGLLVRNLPLD
Sbjct: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSYRDRRSPAPSGLLVRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+R+AEDAAEAKQQLNH+VIGGRE
Sbjct: 61  ARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHSVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSR-SSGR---SYRRRSPARSPRRRYRSYSRSPSPARHDSRS 180
           IRIVFAEENRKTPQEMR T+R SSGR   S RRR+P RSPRR+YRSYSRSPSP R DSR 
Sbjct: 121 IRIVFAEENRKTPQEMRTTTRVSSGRYGGSSRRRTPPRSPRRQYRSYSRSPSPVRRDSRD 180

Query: 181 RGARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPR-EVDNARSRSRSPKGDSR 240
           RGARD+Y SP +SRSIS S SPRD +DY RSP+P++NGRSPR E D A SRSRS +G+SR
Sbjct: 181 RGARDDYRSPVQSRSISRSPSPRDGRDYRRSPSPRENGRSPRDERDYAPSRSRSLRGNSR 240

Query: 241 SPSGSRSRSYSPR 249
           SPS SRSRSYSPR
Sbjct: 241 SPSRSRSRSYSPR 253

BLAST of MELO3C006598T2 vs. TrEMBL
Match: A0A067KV64_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02045 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 7.5e-102
Identity = 195/258 (75.58%), Postives = 218/258 (84.50%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDD--PRDRYRESRSHRDRRSPAPSGLLVRNLP 60
           MARYRSRSRSYSPRRRS+TPPR RK Y DD  PRDRYR+SRS+R+RRSPAPSGLLVRNLP
Sbjct: 1   MARYRSRSRSYSPRRRSKTPPRSRKHYYDDVEPRDRYRDSRSYRERRSPAPSGLLVRNLP 60

Query: 61  LDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGG 120
           LDARPEDLR PFE++GPVKDVYLPKNYYTGEPRGFGFVKFR+AEDAAEAKQ++NH +IGG
Sbjct: 61  LDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKFRYAEDAAEAKQRMNHRIIGG 120

Query: 121 REIRIVFAEENRKTPQEMRVTSRSSGR---SYRRRSPARSPRRRYRSYSRSPSPARHDSR 180
           REIRIVFAEENRKTPQEMR +SR SGR   S+R R+P RSPRRR+ SYS+SPSPARHDSR
Sbjct: 121 REIRIVFAEENRKTPQEMRTSSRVSGRYGGSHRGRTPPRSPRRRHHSYSQSPSPARHDSR 180

Query: 181 SRGAR-DEYLSPARSRSISHSRSPRDRQDY---SRSPTPKDNGRSPR-EVDNARSRSRSP 240
             G R D+Y SP RSRSIS SRSP+D +DY    R P+P++NG+SP  E D A  RSRSP
Sbjct: 181 DHGVRDDDYQSPRRSRSISRSRSPKDERDYKSNQRFPSPRENGQSPHDERDYASGRSRSP 240

Query: 241 KGDSRSPSGSRSRSYSPR 249
           +GDSRS S S  RSY  R
Sbjct: 241 RGDSRSRSRSPLRSYGSR 258

BLAST of MELO3C006598T2 vs. TrEMBL
Match: A0A151STA7_CAJCA (35 kDa SR repressor protein OS=Cajanus cajan GN=KK1_004323 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.1e-100
Identity = 191/251 (76.10%), Postives = 207/251 (82.47%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           M RYRSRSRSYSPRRRSRTPPRGRKRY DD   RY +SRS+RDRRSP PSGLLVRNLPLD
Sbjct: 1   MGRYRSRSRSYSPRRRSRTPPRGRKRYVDD---RYADSRSYRDRRSPLPSGLLVRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+R+ EDAAEAKQ LNHT+IGGRE
Sbjct: 61  ARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHLNHTIIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSRSSGR-----SYRRRSPARSPRRRYRSYSRSPSPARHDSR 180
           IRIVFAEENRKTPQEMRV SR SGR       RRR+ +RSPRRRY SYSRSPSPAR DSR
Sbjct: 121 IRIVFAEENRKTPQEMRVNSRGSGRYGGGGGGRRRNRSRSPRRRYHSYSRSPSPARDDSR 180

Query: 181 SRGARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPRE-VDNARSRSRSPKGDS 240
               RD+Y SP RSRS S S SP   +DY +SP P++NGRSP +  D   SRS SP+G+ 
Sbjct: 181 DDRGRDDYYSPERSRSYSRSPSPSGGKDYRKSPHPRENGRSPNDKKDQTPSRSPSPRGND 240

Query: 241 RSPSGSRSRSY 246
           RSPS SRSRSY
Sbjct: 241 RSPSRSRSRSY 248

BLAST of MELO3C006598T2 vs. TrEMBL
Match: V7CAC4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G099500g PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.0e-99
Identity = 192/257 (74.71%), Postives = 211/257 (82.10%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPP------RGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLV 60
           M RYRSRSRSYSPRRRSRTPP      RGRKRY DD   RY +SRS+RDRRSP PSGLLV
Sbjct: 1   MGRYRSRSRSYSPRRRSRTPPPPPPLPRGRKRYVDD---RYGDSRSYRDRRSPLPSGLLV 60

Query: 61  RNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHT 120
           RNLPLDARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+R+ EDAAEAKQ LNHT
Sbjct: 61  RNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHLNHT 120

Query: 121 VIGGREIRIVFAEENRKTPQEMRVTSRSSGR--SYRRRSPARSPRRRYRSYSRSPSPARH 180
           +IGGREIRIVFAEENRKTPQEMRV+SR S R    RRR+ +RSP+RRYRSYSRSPSPAR 
Sbjct: 121 IIGGREIRIVFAEENRKTPQEMRVSSRGSSRHGGGRRRNRSRSPQRRYRSYSRSPSPARD 180

Query: 181 DSRSRGARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPRE-VDNARSRSRSPK 240
           DSR    RD+Y SP RSRS S S SP   +DY +SP P++NGRSP +      SRS+SP+
Sbjct: 181 DSRDDRGRDDYYSPERSRSYSRSLSPSGGKDYKKSPRPRENGRSPDDKKGQTPSRSQSPR 240

Query: 241 GDSRSPSGSRSRSYSPR 249
           G+ RSPS SRSRSYSPR
Sbjct: 241 GNDRSPSRSRSRSYSPR 254

BLAST of MELO3C006598T2 vs. TAIR10
Match: AT5G18810.1 (AT5G18810.1 SC35-like splicing factor 28)

HSP 1 Score: 271.9 bits (694), Expect = 3.8e-73
Identity = 159/250 (63.60%), Postives = 179/250 (71.60%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MAR RSRSRSYSPR R R+PPR RK YDD+   R RE  S RD  S  PSGLL+RNLPLD
Sbjct: 1   MARARSRSRSYSPRPRDRSPPRERKGYDDN---RLRERPSSRDHESSGPSGLLIRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARP DLR  FERFGP+KD+YLP+NYYTGEPRGFGFVK+R+AEDAAEA +++NH VIGGRE
Sbjct: 61  ARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSRSSGR--SYRRRSPARSPRRRYRSYSRSPSPARHDSR-SR 180
           I IVFAEENRKTPQEMR T+ +SGR   Y+R S  RSPRRRYRS+SRS SP R +SR S+
Sbjct: 121 IAIVFAEENRKTPQEMRTTNGTSGRHGDYKRTS-HRSPRRRYRSHSRSRSPPRRESRHSK 180

Query: 181 GARDEYLSP-ARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRS 240
              D+  SP  RSRSIS S  PR+ ++Y        N RSPRE      R  +P   SR 
Sbjct: 181 VREDDLYSPRRRSRSISRSPLPRNEREYK-----SRNCRSPRE-----ERVLTPI-RSRC 235

Query: 241 PSGSRSRSYS 247
            S SRSRS S
Sbjct: 241 LSRSRSRSLS 235

BLAST of MELO3C006598T2 vs. TAIR10
Match: AT3G13570.1 (AT3G13570.1 SC35-like splicing factor 30A)

HSP 1 Score: 189.1 bits (479), Expect = 3.2e-48
Identity = 120/248 (48.39%), Postives = 145/248 (58.47%), Query Frame = 1

Query: 7   RSRSYSPRRRSRTPPRG--RKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPE 66
           R RSY+P     +PPRG  R+     PR R+  SR      S  P+ LLVRNL  D R E
Sbjct: 2   RGRSYTP-----SPPRGYGRRGRSPSPRGRFGGSRD-----SDLPTSLLVRNLRHDCRQE 61

Query: 67  DLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIV 126
           DLR PFE+FGPVKD+YLP++YYTG+PRGFGF++F    DAAEAK Q++  ++ GRE+ +V
Sbjct: 62  DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVV 121

Query: 127 FAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGARDEYL 186
           FAEENRK P EMR   R  GRS R +   RSP R    YSRSP P R   RSR     Y 
Sbjct: 122 FAEENRKKPTEMRTRDR-GGRSNRFQDRRRSPPR----YSRSP-PPRRGRRSRSRSRGYN 181

Query: 187 SPARSRSISHSRSPRDR-----QDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSG 246
           SP   R  S S SP+DR     + YSRSP    +          +S SRSP+   RS S 
Sbjct: 182 SPPAKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPR---RSVSP 230

Query: 247 SRSRSYSP 248
            ++RSY+P
Sbjct: 242 RKNRSYTP 230

BLAST of MELO3C006598T2 vs. TAIR10
Match: AT1G55310.3 (AT1G55310.3 SC35-like splicing factor 33)

HSP 1 Score: 178.3 bits (451), Expect = 5.7e-45
Identity = 124/269 (46.10%), Postives = 145/269 (53.90%), Query Frame = 1

Query: 7   RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDL 66
           R RSY+P     +PPRG  R    P  R R     RD     P+ LLVRNL  D R EDL
Sbjct: 2   RGRSYTP-----SPPRGYGRRGRSPSPRGRYGGRSRD----LPTSLLVRNLRHDCRQEDL 61

Query: 67  RIPFERFGPVKDVYLPKNYYTG------------EPRGFGFVKFRFAEDAAEAKQQLNHT 126
           R  FE+FGPVKD+YLP++YYTG            +PRGFGFV+F    DAA+AK  ++  
Sbjct: 62  RKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGY 121

Query: 127 VIGGREIRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDS 186
           ++ GRE+ +VFAEENRK P EMR   R  G  +R R   R    RY S SRSP P R  S
Sbjct: 122 LLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDR---RRTPPRYYSRSRSPPPRRGRS 181

Query: 187 RSRGARDEYLSPARSRSISHSRSPRD-----RQDYSRSP-TPKDNGRSPREV-------- 246
           RSR    +Y SP   R    S SPR+     R+ YSRSP +    GRS   V        
Sbjct: 182 RSRSG--DYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLS 241

Query: 247 -DNARSRSRSPKGDSRSPSGSRSRSYSPR 249
               RS SRSP+  SRSPS  R+RS SPR
Sbjct: 242 PSPRRSISRSPR-RSRSPSPKRNRSVSPR 255


HSP 2 Score: 172.9 bits (437), Expect = 2.4e-43
Identity = 127/295 (43.05%), Postives = 152/295 (51.53%), Query Frame = 1

Query: 7   RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDL 66
           R RSY+P     +PPRG  R    P  R R     RD     P+ LLVRNL  D R EDL
Sbjct: 2   RGRSYTP-----SPPRGYGRRGRSPSPRGRYGGRSRD----LPTSLLVRNLRHDCRQEDL 61

Query: 67  RIPFERFGPVKDVYLPKNYYTG------------EPRGFGFVKFRFAEDAAEAKQQLNHT 126
           R  FE+FGPVKD+YLP++YYTG            +PRGFGFV+F    DAA+AK  ++  
Sbjct: 62  RKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGY 121

Query: 127 VIGGREIRIVFAEENRKTPQEMRVTSRSSGRSYR--RRSPAR-------SPRRRYRSYSR 186
           ++ GRE+ +VFAEENRK P EMR   R  G  +R  RR+P R        P RR RS SR
Sbjct: 122 LLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRRRTPPRYYSRSRSPPPRRGRSRSR 181

Query: 187 S-----PSPARHDSR--------------------SRGARDEYLSPARSRSISHSRSPR- 246
           S     P P RH  R                    S G+R   L+P R +S S S SPR 
Sbjct: 182 SGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPRR 241

Query: 247 ---DRQDYSRSPTPKDN-GRSP-REVDNARSRSRSPKGDSRS--PSGSRSRSYSP 248
                   SRSP+PK N   SP R +  +  RSRSP+   RS  P  +RSRS SP
Sbjct: 242 SISRSPRRSRSPSPKRNRSVSPRRSISRSPRRSRSPRRSRRSYTPEPARSRSQSP 287

BLAST of MELO3C006598T2 vs. TAIR10
Match: AT3G55460.1 (AT3G55460.1 SC35-like splicing factor 30)

HSP 1 Score: 171.8 bits (434), Expect = 5.4e-43
Identity = 116/256 (45.31%), Postives = 135/256 (52.73%), Query Frame = 1

Query: 11  YSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPF 70
           YSP RR     RGR      PR  Y        RR  +   LLVRN+PLD RPE+LR PF
Sbjct: 9   YSPPRRGYGG-RGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPEELREPF 68

Query: 71  ERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENR 130
           ERFGPV+DVY+P++YY+G+PRGF FV+F  A DA EA++ +N     GREI +V A E+R
Sbjct: 69  ERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESR 128

Query: 131 KTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPAR-HDSRSRGARDEYLSPARS 190
           K P+EMRV +R+  R           R R RS SRS SP R  DSRSR  R    SPA  
Sbjct: 129 KRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSR-YRSRSYSPAPR 188

Query: 191 RSISHSRSPRDRQDYSRSPTPKDNGRS------PREVDN---------ARSRSRSPKGDS 249
           R     R   D     RS +P   G +       R  DN         A  R R  +  S
Sbjct: 189 RRGGPPRGEEDENYSRRSYSPGYEGAAAAAPDRDRNGDNEIREKPGYEAEDRRRGGRAVS 248


HSP 2 Score: 30.8 bits (68), Expect = 1.5e+00
Identity = 20/48 (41.67%), Postives = 24/48 (50.00%), Query Frame = 1

Query: 2   ARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAP 50
           +RYRSRS S +PRRR   PPRG    +D+   R   S  +    + AP
Sbjct: 174 SRYRSRSYSPAPRRRG-GPPRGE---EDENYSRRSYSPGYEGAAAAAP 217

BLAST of MELO3C006598T2 vs. TAIR10
Match: AT5G64200.1 (AT5G64200.1 ortholog of human splicing factor SC35)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21
Identity = 78/213 (36.62%), Postives = 108/213 (50.70%), Query Frame = 1

Query: 52  LLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQL 111
           LLV N+      +DL   F ++G V DV++P++  TG+ RGF FV++++ ++A +A ++L
Sbjct: 18  LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77

Query: 112 NHTVIGGREIRIVFAEEN---RKTPQEMRVTSRSSGRSYRRRSPARSPR-RRYRSYSRSP 171
           +  V+ GREI + FA+      K  +   V      R  R RSP RS   RR RS  R  
Sbjct: 78  DGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRR 137

Query: 172 SPARHDSRSRGARDEYLSP---ARSRSISHSRSPRD--------RQDYSRSPTPKDNGRS 231
           SP R  S  R +RD+Y       RSRS S+ R  R         R+  SRS +P +  R 
Sbjct: 138 SPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEKRRV 197

Query: 232 PREVDN-ARSRSRSPKGDSRSPSGSRSRSYSPR 249
               DN +RS SRS    S SP+    RS SP+
Sbjct: 198 RGRYDNESRSHSRSL---SASPARRSPRSSSPQ 227


HSP 2 Score: 45.4 bits (106), Expect = 5.8e-05
Identity = 46/128 (35.94%), Postives = 52/128 (40.62%), Query Frame = 1

Query: 129 NRKTPQEMRVTSRSSGRSYRRR----SPARSPRRRYRSYSRSPSPARHDSRSRGARDEYL 188
           +R   +E     RS  RSY RR       R  RRR RS S SP         R  R  Y 
Sbjct: 149 SRDDYREKDYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASP------DEKRRVRGRYD 208

Query: 189 SPARSRSISHSRSPRDRQDYSRSPTPKDNGR--SPREVDNARSRSRSPKGDSRSPS---G 248
           + +RS S S S SP  R   S SP      R  SP +  N RS S       RSP+    
Sbjct: 209 NESRSHSRSLSASPARRSPRSSSPQKTSPAREVSPDKRSNERSPSPRRSLSPRSPALQKA 268

BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|659076620|ref|XP_008438778.1| (PREDICTED: serine/arginine-rich splicing factor 33 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 1.7e-139
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD
Sbjct: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE
Sbjct: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGAR 180
           IRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGAR
Sbjct: 121 IRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGAR 180

Query: 181 DEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGS 240
           DEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGS
Sbjct: 181 DEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGS 240

Query: 241 RSRSYSPR 249
           RSRSYSPR
Sbjct: 241 RSRSYSPR 248

BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|449432785|ref|XP_004134179.1| (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28 [Cucumis sativus])

HSP 1 Score: 498.8 bits (1283), Expect = 5.4e-138
Identity = 246/248 (99.19%), Postives = 247/248 (99.60%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD
Sbjct: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE
Sbjct: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGAR 180
           IRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRR RSYSRSPSPARHDSRSRGAR
Sbjct: 121 IRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRNRSYSRSPSPARHDSRSRGAR 180

Query: 181 DEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGS 240
           DEYLSPARSRSISHSRSPRDR+DYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGS
Sbjct: 181 DEYLSPARSRSISHSRSPRDRRDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGS 240

Query: 241 RSRSYSPR 249
           RSRSYSPR
Sbjct: 241 RSRSYSPR 248

BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|645232904|ref|XP_008223084.1| (PREDICTED: serine/arginine-rich splicing factor 33 isoform X2 [Prunus mume])

HSP 1 Score: 426.4 bits (1095), Expect = 3.4e-116
Identity = 213/252 (84.52%), Postives = 230/252 (91.27%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRS+RDRRSPAPSGLLVRNLPLD
Sbjct: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSYRDRRSPAPSGLLVRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+R+AEDAAEAKQQLNH+VIGGRE
Sbjct: 61  ARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHSVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSRSSGR---SYRRRSPARSPRRRYRSYSRSPSPARHDSRSR 180
           IRIVFAEENRKTPQEMR T+R SGR   S RRR+P RSPRR+YRSYSRSPSP  HDSR R
Sbjct: 121 IRIVFAEENRKTPQEMRTTTRVSGRYGGSSRRRTPPRSPRRQYRSYSRSPSPVMHDSRDR 180

Query: 181 GARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPR-EVDNARSRSRSPKGDSRS 240
           GARD+Y SP +SRS+S S SPRD +DY RSP+P++NGRSPR E D A SRSRS +G+SRS
Sbjct: 181 GARDDYRSPVQSRSVSRSPSPRDGRDYRRSPSPRENGRSPRDERDYAPSRSRSLRGNSRS 240

Query: 241 PSGSRSRSYSPR 249
           PS SRSRSYSPR
Sbjct: 241 PSRSRSRSYSPR 252

BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|596298726|ref|XP_007227540.1| (hypothetical protein PRUPE_ppa010343mg [Prunus persica])

HSP 1 Score: 426.0 bits (1094), Expect = 4.5e-116
Identity = 214/252 (84.92%), Postives = 230/252 (91.27%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRS+RDRRSPAPSGLLVRNLPLD
Sbjct: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSYRDRRSPAPSGLLVRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+R+AEDAAEAKQQLNH+VIGGRE
Sbjct: 61  ARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHSVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSRSSGR---SYRRRSPARSPRRRYRSYSRSPSPARHDSRSR 180
           IRIVFAEENRKTPQEMR T+R SGR   S RRR+P RSPRR+YRSYSRSPSP R DSR R
Sbjct: 121 IRIVFAEENRKTPQEMRTTTRVSGRYGGSSRRRTPPRSPRRQYRSYSRSPSPVRRDSRDR 180

Query: 181 GARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPR-EVDNARSRSRSPKGDSRS 240
           GARD+Y SP +SRSIS S SPRD +DY RSP+P++NGRSPR E D A SRSRS +G+SRS
Sbjct: 181 GARDDYRSPVQSRSISRSPSPRDGRDYRRSPSPRENGRSPRDERDYAPSRSRSLRGNSRS 240

Query: 241 PSGSRSRSYSPR 249
           PS SRSRSYSPR
Sbjct: 241 PSRSRSRSYSPR 252

BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|645232902|ref|XP_008223083.1| (PREDICTED: serine/arginine-rich splicing factor 33 isoform X1 [Prunus mume])

HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-115
Identity = 214/253 (84.58%), Postives = 231/253 (91.30%), Query Frame = 1

Query: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD 60
           MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRS+RDRRSPAPSGLLVRNLPLD
Sbjct: 1   MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSYRDRRSPAPSGLLVRNLPLD 60

Query: 61  ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE 120
           ARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+R+AEDAAEAKQQLNH+VIGGRE
Sbjct: 61  ARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHSVIGGRE 120

Query: 121 IRIVFAEENRKTPQEMRVTSR-SSGR---SYRRRSPARSPRRRYRSYSRSPSPARHDSRS 180
           IRIVFAEENRKTPQEMR T+R SSGR   S RRR+P RSPRR+YRSYSRSPSP  HDSR 
Sbjct: 121 IRIVFAEENRKTPQEMRTTTRVSSGRYGGSSRRRTPPRSPRRQYRSYSRSPSPVMHDSRD 180

Query: 181 RGARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPR-EVDNARSRSRSPKGDSR 240
           RGARD+Y SP +SRS+S S SPRD +DY RSP+P++NGRSPR E D A SRSRS +G+SR
Sbjct: 181 RGARDDYRSPVQSRSVSRSPSPRDGRDYRRSPSPRENGRSPRDERDYAPSRSRSLRGNSR 240

Query: 241 SPSGSRSRSYSPR 249
           SPS SRSRSYSPR
Sbjct: 241 SPSRSRSRSYSPR 253

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SRC28_ARATH6.8e-7263.60Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana GN=... [more]
SL30A_ARATH5.8e-4748.39Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana GN... [more]
SRC33_ARATH1.7e-4648.84Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana GN=... [more]
SRC30_ARATH9.5e-4245.31Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana GN=... [more]
SRS12_HUMAN6.0e-2839.71Serine/arginine-rich splicing factor 12 OS=Homo sapiens GN=SRSF12 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
M5XS42_PRUPE3.1e-11684.92Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010343mg PE=4 SV=1[more]
M5Y9H7_PRUPE1.5e-11584.98Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010343mg PE=4 SV=1[more]
A0A067KV64_JATCU7.5e-10275.58Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02045 PE=4 SV=1[more]
A0A151STA7_CAJCA3.1e-10076.1035 kDa SR repressor protein OS=Cajanus cajan GN=KK1_004323 PE=4 SV=1[more]
V7CAC4_PHAVU2.0e-9974.71Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G099500g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G18810.13.8e-7363.60 SC35-like splicing factor 28[more]
AT3G13570.13.2e-4848.39 SC35-like splicing factor 30A[more]
AT1G55310.35.7e-4546.10 SC35-like splicing factor 33[more]
AT3G55460.15.4e-4345.31 SC35-like splicing factor 30[more]
AT5G64200.12.0e-2136.62 ortholog of human splicing factor SC35[more]
Match NameE-valueIdentityDescription
gi|659076620|ref|XP_008438778.1|1.7e-139100.00PREDICTED: serine/arginine-rich splicing factor 33 [Cucumis melo][more]
gi|449432785|ref|XP_004134179.1|5.4e-13899.19PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28 [Cucumis sativus... [more]
gi|645232904|ref|XP_008223084.1|3.4e-11684.52PREDICTED: serine/arginine-rich splicing factor 33 isoform X2 [Prunus mume][more]
gi|596298726|ref|XP_007227540.1|4.5e-11684.92hypothetical protein PRUPE_ppa010343mg [Prunus persica][more]
gi|645232902|ref|XP_008223083.1|1.7e-11584.58PREDICTED: serine/arginine-rich splicing factor 33 isoform X1 [Prunus mume][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000221Protamine_P1
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0007283spermatogenesis
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007283 spermatogenesis
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0016607 nuclear speck
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C006598MELO3C006598gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C006598T2MELO3C006598T2-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006598T2.cds1MELO3C006598T2.cds1CDS
MELO3C006598T2.cds2MELO3C006598T2.cds2CDS
MELO3C006598T2.cds3MELO3C006598T2.cds3CDS
MELO3C006598T2.cds4MELO3C006598T2.cds4CDS
MELO3C006598T2.cds5MELO3C006598T2.cds5CDS
MELO3C006598T2.cds6MELO3C006598T2.cds6CDS
MELO3C006598T2.cds7MELO3C006598T2.cds7CDS


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000221Protamine P1PROSITEPS00048PROTAMINE_P1coord: 2..12
scor
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 52..122
score: 3.9
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 51..124
score: 1.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 50..128
score: 17
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 51..124
score: 0.
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 17..132
score: 1.1
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 47..153
score: 2.28
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 21..248
score: 1.4E
NoneNo IPR availablePANTHERPTHR23147:SF7SUBFAMILY NOT NAMEDcoord: 21..248
score: 1.4E