MELO3C006598T2 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATCTCACCGATCATGTCATGGGTGGACGTTTAAATCTTGAAGCGGTAGGGTTTAGGGCATGATTTTATCTCCAACCCGATCGTCTCCTTCCCTCCCTCCAAAATATTCGAAGCCCATCATTAGACTCATTTTCCTTCTCCCAAATTCCCATTAGGGTTAGGGTTCTCACTGCTTCAGTTTCCGAGTAAGACACGCTAATAACCCACTATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGTATTTCATGTTCTTCTTCGAGCTTTCTATGTTATTGATAATGTCTCGCGTTATTATTTTGATGGAGGAATTGAATGCCTCATTTGCTTTCATGTTTTTGTACATACTAGTGCACTTTTGTTTAGAATCTGGAATTTTGGGCAGGCTGTAAAGGGGTTTACCGTATGAATTTTGATTAGTAGGCATGTGAAGAGTTGATCAAAAAGAGCATTTGTTGCAAGTAATTTACTGTCAAGCCGTGTGCTATCGTGCTACATTGCATTATTTTCTCATTTCCCGTAGTCTATCCATTCTATTTACGAAGAGGAACGATTGAGTGTTTGCATTGTATACCATGCAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGTATGGCCGCTTTCATGTTAACATGTGCGCTCTTGGGTGTTGAAGAAATCACTTTATTATTTCCTGGTATTTTTTTCTCTTAATTATCGGGATATCCACACTAGATAACAGATTTTTGGCTATATTAGTTATGGAAGAAAACAGTTGAGAAAATCTTTGAGATTAAGTTGTGGGATCATAATTTCGGAGCACTGCTGAAGTTTTAACGATTAAATTTCCTTTACCATCATGTAATTATTTGGTTAAGATCGACAACAAGTCAATCTGAAAGAATGAAGGGTAAGTTTGCTGCATATAGAAGGAATCTGCAAATTTATCGGTTAACCTGAACTTTGTTTGTACTTAATCCTAGAAAGGATGAATTGACTGACAAGGAATTATTTGTAGGGGAATGATGTGTTTGTTAGTCTATAATAGCAGTGGTCAACAAGAAAGAAATTCTTGAAGCGTGTGTGAATTAGTTGAGTTGACAGTGGCTCTACATTAAATATGTGTCTAAAACTTAATACTGCCTGGCAACCCTTTCTGGTTATTACTTATTACAGAGATCTACTTTGCTTTCTCTCTCATTATGATATCTACTTAGCCTTCTCTCTCATTATGATATCATTCTCTTTATTGCCTATTTGTAGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGGTTCAATGACCTTCCTCTTAACCTCTAATCTTGCAGTATCGTTTGGTTGAATATCTTCTCCATGAAACCAGTATCTTTAACTTTGATCTATTATATTGATAGTCTCTTGTTTCTCATATACAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTGTTAGTGTCAATACATTTATCTTTTTTCTTTCTTTCTTTTTTGCTGACTTTCATGAAAATAATTGCATTGGCTTGATGATCTTTGATGTTATCATCGTGATGCAATATTGTAATTACACCCTTAATTTTTATTCTCAAGAAGCCTTTTGTATTTGACTGCAGCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGTTGGATCTTATTTATCATACTTGTTTTACTTCTAGCAAGACTAACATCATTATTGTCCTGCTTTTTTCCATCACTTCTTACTTCTGTACATTACTATGAATTTTGGTCGTTCCTGTCTTGATGTTTACTTGTTTAGTAAGCTGCACATGCCTTCTTTGAATTTTATAATTTAGTACTGTAACATGTCAAAGCATTCTTTTTGGATGAGAAGCATTGTATAATATTTTTGAAATTTTGTACTTGTCTTATATAGAATACCCAAACGCCAAACCCCCAAAATGGAAGTGCTTATTCCTTGTTTTAATTTTCAGTGGAACCAAAATGATTTTGTGTGTAAATTTAATGTACAATTAAGTTTATTTTGGGTGAAAATCATTTTTGTAGAAATATTTCGATATATTCAATGTAATTCTATTTTCGACCAGAACCTCAAGGCTTCGGTTTTGTCAAGAGCCTCTTAAATTTATCAATGGTGTTTCAATTTTAAGTACAAAATCCATTTCTAATGGATGAGCCATTTTTGCTCCTTTGTCATGTTGTGAAGTTCATAGTCAATATAAATAGTACTCTGCTGTGGTTTCTGAAATGGTAATAATCACTTTCGTCATTTTTATAATGACTCGAGAAATGCTTCTAATCATTTAAAATCAATTTTGTAGTCTGAAAAATGCATTTAAGAGAGAAAATTAAAAATTGAATTGATCTTGAGTGACTAAAGGTGTGTTTCAAAGTGATTTTAGTACATGACAAGGGATTTTAACAATTTCAAAATCACCCCCAAACATGCACTAAATAGTTTGACAACAATTGTGGCACTTCTAATCTTCATTTCCTCATTAGGTTTATAACATCAAATCTATATATTAATTCTAAGCAACAGTTTCAGTTTTTTGTTGTTTTACAAGCTTTAGTTGTAGAATTTTTATTTCATATGCTTGAATGTTATCATGGATAAGCAAAAACACAGAATTTAATGTTTGATTTGATGCACGTGGAATATTCTACTCCCTTCATGGTACAGAGTTGCATTGCAGGACATTGTATACAATCTACTTGATTCCTTGTTTATGCAGATATTAAAGTGTAAAGGGAGACTTTAAAGACTTGTTGATTAATAAAGTTTAACAAGAAAAGCGATCATAAAGTGATGGGCAACTTGCTTACTTTACCTATCGAACCCTCTCCATGAGTACAATCTATTACTTTTTTTAATTACGTTAGTTGCATGGTTTTTATTGTTTGTTTACATCTGTTTTGTTAGGCAGAAGTTGAGCATTGACGAGAGTTTTAAATCAAAATTTATCTCTGGTTCTTTTTTCCCCATTTTTCCTCCCTTACAAATCTCAACCATTTATCAGCAAGAAAGTGATCTTTAAGTTTGATATCTTCTTTTGCATATACTATCCAGTTAAGAAAGATTAGAGCTTATAGTTGGCCAAAGAAAGAAATCATCTTCAAAGGAGAAAAGGCCAAAGTTTTACTGGTTGTCGTATGGTGACATTGTCCAAGAAAAGATAATGTGTTTTTTAGAAAGTTGGGGCAAAGAGAGCTATGAACTTGTCAGAAGCTGATCAACCAGTACAGCTTAATAGAGCATAATTCTCAGTGTTTGGATCTACTTGTCATTATTTTGTTCGGAAACCTGAAAATGGTGCAGGTAAAAGTCATGTTTTAGTTGAACAGTTTTGAAAATGATGTTGATAGAAAATTGTGCTTATAAAAGTATGATCAAGTATCATAAGTACCTATTGAACGTACCTCATTGGGGCCTTTGAAGACTGCTTGGACAGGTTTTCTTTCCTGTTAGAGAGAGAGTTGGTTTTCTGTGTTTCAATTCTGAATGAAAACCGTTTCTGTTTGATATGTTGATTTTCATTATTTTTTTTCTGTTGTTGTGGATGATACAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGGTATTTTACCTTATGCTCCTTTACATCTTAAGTTTCCTTTTTTTTTTATCTCTGCATTTCTGAATAAGAGGATCTACACAGGGAACCGCGTATCACACGTGTTGGTACTGGTAGTTTCAGAATTCATGGTGATTCATTAAACTATATAAATAAGTGTTATATTATCGTTTCATTTTACCTTGGTGAGAGAGACCTATGGTAGGATAGACGTCTGATATGGAGGGCTAAGTTAATCTCCTAGAATATATAGATTGTTTACGATGGAGGATGAACAGAGCTTTATTTAATAAGCTCTCATGATTCGTGTTATTCTCACAGGTGTTTGTTGAATTTAATTGGTTAGAAGAGGCGAGAAAGAAATGACACATTTGGATGATTTGGTTTTTTGCTCCTTTGTTCAAGAATTTCTTTGGTTATCTGTTGATCTTGTAGAATTTAGTAAAACCCTTTGGAGAAATTTTAATTTATTTGCTAATGTTCACACTTAAATACAATATAAACTGGGGATGAGATTTGAGATCCCCTTGGTTAAGGGGGCAGCAAAGTACTCGACTGTTTTGTCATTATTGAACATTTCACATGGTCCAAAGTGTGTTGTGTTTAGGCAGTAATGCTTTCCTCTGGTTAATTGAAGAATTTAAAATTTTAACTAACACCCTGTAATGTTTACTTCTGCAGTCCTCGCTGATAGAGTTTTGGAATTGTGCGGTGATTCTGCTGCAGTCAGTCCTTGAGAATTGTTAAGTCTGCCTTCAGTTGTGGCCAGATGAACTATGCTATTCCATGCTTTGCAGTTTCTGTAAGGAATTTTATTTACATATGAAAGTAGGGAGGCGAGACTTGAGATATGGATTGAAGAACAATGAATGTTGACTTCATATGAATGCATGCTGATACACTTCTACTTGACCTTTACTAGATTTAGGATTTTGGCTTAAATTTCGTTTTTGTACTCTTGTATATACTCTGGTTGTATTTTTCAACTTAGTGGTCTTGTTCGTTTATCAGTTTT AAATCTCACCGATCATGTCATGGGTGGACGTTTAAATCTTGAAGCGGTAGGGTTTAGGGCATGATTTTATCTCCAACCCGATCGTCTCCTTCCCTCCCTCCAAAATATTCGAAGCCCATCATTAGACTCATTTTCCTTCTCCCAAATTCCCATTAGGGTTAGGGTTCTCACTGCTTCAGTTTCCGAGTAAGACACGCTAATAACCCACTATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGTCCTCGCTGATAGAGTTTTGGAATTGTGCGGTGATTCTGCTGCAGTCAGTCCTTGAGAATTGTTAAGTCTGCCTTCAGTTGTGGCCAGATGAACTATGCTATTCCATGCTTTGCAGTTTCTGTAAGGAATTTTATTTACATATGAAAGTAGGGAGGCGAGACTTGAGATATGGATTGAAGAACAATGAATGTTGACTTCATATGAATGCATGCTGATACACTTCTACTTGACCTTTACTAGATTTAGGATTTTGGCTTAAATTTCGTTTTTGTACTCTTGTATATACTCTGGTTGTATTTTTCAACTTAGTGGTCTTGTTCGTTTATCAGTTTT ATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGTCCTCGCTGA MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGSRSRSYSPR*
BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SRC28_ARATH (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana GN=SCL28 PE=1 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 6.8e-72 Identity = 159/250 (63.60%), Postives = 179/250 (71.60%), Query Frame = 1
BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SL30A_ARATH (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana GN=SCL30A PE=1 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.8e-47 Identity = 120/248 (48.39%), Postives = 145/248 (58.47%), Query Frame = 1
BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SRC33_ARATH (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana GN=SCL33 PE=1 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46 Identity = 126/258 (48.84%), Postives = 147/258 (56.98%), Query Frame = 1
HSP 2 Score: 182.2 bits (461), Expect = 7.0e-45 Identity = 128/282 (45.39%), Postives = 152/282 (53.90%), Query Frame = 1
BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SRC30_ARATH (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana GN=SCL30 PE=1 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 9.5e-42 Identity = 116/256 (45.31%), Postives = 135/256 (52.73%), Query Frame = 1
HSP 2 Score: 30.8 bits (68), Expect = 2.6e+01 Identity = 20/48 (41.67%), Postives = 24/48 (50.00%), Query Frame = 1
BLAST of MELO3C006598T2 vs. Swiss-Prot
Match: SRS12_HUMAN (Serine/arginine-rich splicing factor 12 OS=Homo sapiens GN=SRSF12 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.0e-28 Identity = 81/204 (39.71%), Postives = 111/204 (54.41%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TrEMBL
Match: M5XS42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010343mg PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 3.1e-116 Identity = 214/252 (84.92%), Postives = 230/252 (91.27%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TrEMBL
Match: M5Y9H7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010343mg PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 1.5e-115 Identity = 215/253 (84.98%), Postives = 231/253 (91.30%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TrEMBL
Match: A0A067KV64_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02045 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 7.5e-102 Identity = 195/258 (75.58%), Postives = 218/258 (84.50%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TrEMBL
Match: A0A151STA7_CAJCA (35 kDa SR repressor protein OS=Cajanus cajan GN=KK1_004323 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.1e-100 Identity = 191/251 (76.10%), Postives = 207/251 (82.47%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TrEMBL
Match: V7CAC4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G099500g PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.0e-99 Identity = 192/257 (74.71%), Postives = 211/257 (82.10%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TAIR10
Match: AT5G18810.1 (AT5G18810.1 SC35-like splicing factor 28) HSP 1 Score: 271.9 bits (694), Expect = 3.8e-73 Identity = 159/250 (63.60%), Postives = 179/250 (71.60%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TAIR10
Match: AT3G13570.1 (AT3G13570.1 SC35-like splicing factor 30A) HSP 1 Score: 189.1 bits (479), Expect = 3.2e-48 Identity = 120/248 (48.39%), Postives = 145/248 (58.47%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TAIR10
Match: AT1G55310.3 (AT1G55310.3 SC35-like splicing factor 33) HSP 1 Score: 178.3 bits (451), Expect = 5.7e-45 Identity = 124/269 (46.10%), Postives = 145/269 (53.90%), Query Frame = 1
HSP 2 Score: 172.9 bits (437), Expect = 2.4e-43 Identity = 127/295 (43.05%), Postives = 152/295 (51.53%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TAIR10
Match: AT3G55460.1 (AT3G55460.1 SC35-like splicing factor 30) HSP 1 Score: 171.8 bits (434), Expect = 5.4e-43 Identity = 116/256 (45.31%), Postives = 135/256 (52.73%), Query Frame = 1
HSP 2 Score: 30.8 bits (68), Expect = 1.5e+00 Identity = 20/48 (41.67%), Postives = 24/48 (50.00%), Query Frame = 1
BLAST of MELO3C006598T2 vs. TAIR10
Match: AT5G64200.1 (AT5G64200.1 ortholog of human splicing factor SC35) HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21 Identity = 78/213 (36.62%), Postives = 108/213 (50.70%), Query Frame = 1
HSP 2 Score: 45.4 bits (106), Expect = 5.8e-05 Identity = 46/128 (35.94%), Postives = 52/128 (40.62%), Query Frame = 1
BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|659076620|ref|XP_008438778.1| (PREDICTED: serine/arginine-rich splicing factor 33 [Cucumis melo]) HSP 1 Score: 503.8 bits (1296), Expect = 1.7e-139 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|449432785|ref|XP_004134179.1| (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28 [Cucumis sativus]) HSP 1 Score: 498.8 bits (1283), Expect = 5.4e-138 Identity = 246/248 (99.19%), Postives = 247/248 (99.60%), Query Frame = 1
BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|645232904|ref|XP_008223084.1| (PREDICTED: serine/arginine-rich splicing factor 33 isoform X2 [Prunus mume]) HSP 1 Score: 426.4 bits (1095), Expect = 3.4e-116 Identity = 213/252 (84.52%), Postives = 230/252 (91.27%), Query Frame = 1
BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|596298726|ref|XP_007227540.1| (hypothetical protein PRUPE_ppa010343mg [Prunus persica]) HSP 1 Score: 426.0 bits (1094), Expect = 4.5e-116 Identity = 214/252 (84.92%), Postives = 230/252 (91.27%), Query Frame = 1
BLAST of MELO3C006598T2 vs. NCBI nr
Match: gi|645232902|ref|XP_008223083.1| (PREDICTED: serine/arginine-rich splicing factor 33 isoform X1 [Prunus mume]) HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-115 Identity = 214/253 (84.58%), Postives = 231/253 (91.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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