MELO3C006447T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006447T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA/RNA helicase protein
Location	chr6 : 3288046 .. 3289846 (+)
Sequence length	900

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTTGGAAAGACTGTTATGACAATTGCTCTTATACTTGCGAGGATGGGCAAAGGATGCCCTGATAACCAAAAGTCCACAGTGAATAAGAATGTAATCACAGAGAAAAAGAGTCAGAAATCCAGGACTAAAGCAAGGGGTGGCACCCTTATTGTTTGTCCAATGGCTTTGCTGGGTCAATGGAAGGTACATACGCTCTGCAAATTCATGAGGTCCTTTTGTTTTAAGTCCAAAAGCTTGATTAACTTTACATTTAGTGATGCTGAAATGAACTGGGTTGATCTAGCTAGTAGTATAGTAATGACTACCAAACTGAACAATAAAACGCAATTGCATTTCTTAAACTTATGATTTGACCGAATTTTGCTACTGCAGGAGGAACTTGAAATACATTCAGAACCTGAAAGTATTTCCATATTTGTTCATTATGGTGGTGATAGAACCAACAACCCAGAGGTGCTATCAGGATATGATGTTGTATTGACAACGTATGGTGTCCTAACATCGGCCTATAAGAGTGTGAGTATTTGTTTATAAGCTAGTTTCAACTTTATAGTATACATGTTGACACTAGTCAAACCTCTTATTCATTATCCAATATTATTAACTTTTCTATCTGTTTTATTGTCCATTCACTTCTAATTCAGGATGGAGAGTTTAGTATTTACCACAGAGTTGATTGGTACAGAGTTGTGTTAGATGAAGCCCATACAATTAAATCATCAAAGACACAAACTGCACAGGCTGCCTTTACACTTAACTCATATTGTCGCTGGTGTCTTACTGGAACCCCCCTCCAGGTCCAATTCCCAACTTTTTTCCTACTATTTTATCAATATCGTTCTCCTTGGGCATATGTGGCTTCCGAAACAAATTATAGATAGTCTTTCTTTCATATTTGTTTTGCTCCATAAACTTGGCATCTCTTATCCATCCTTTTTAAGAGAGTAAAACGAATAGTCAGAAGATAAGGATTATTTTATAATTTGTGGTCTAGCATCTTATTGAAAACCGTATTTCTTGCTACAGAATAACTTGGAAGACCTTTTCAGCCTGTTGTGCTTCTTGCGAGTGGAACCGTGGTGCAATTGGGCATGGTATGGCAGTTTTAATTCTCTCTTTTTCAGCACACATATTTTAGTTTTAAGTTGGATTGGTCATGCCGAATCTTCTATCCCCTCATTTGCATTTTGGCTTTAATTAGGTGGAACAAGTTGATTCAAAGGCCTTATGAAAATGGTGATCCTAGAGGCTTGAGATTGATCAAGGCTATCCTAAGGCCACTTATGTTGAGGAGAACTAAAGATACAAAGGATGCAAACGGAAGGTAGTTCTTACGTTCTTGCAACATTCTCACAATATAAAGTTCCCCCCCGGATCTAAAGCATGTGACATTTAACTCATCTGATGCAGGCCTATTCTTGTTCTCCCTCCTACCGATGTTCAAACCGTCACATGTGAACAGTCTGAGGCTGAACATGATTTTTATGATGCACTGTTTAAGAGATCAAAAGTAAGTTTTCTTAGAGTAGATTGCTCTTTCGATATACTAAACTGAAGAAGCGAAGAAAAATCTAACACCTTATTCTTTTTCCCTGTCAATTTCACAAGTAGATTAGTGGCTTTCTTTTATCCTTAAATATGTTACTCACTATCCCTTTATTTGAATCAACAGGTCCAGTTTGACCAGTTTGTAGCACAAGGAAAGGTTCTCCACAACTATGCAAACATCCTCGAGCTCTTGCTTCGACTTAGGCAGTGTTGCAACCACCCATTCCTTGTAATGAGGTTGGAATAA

mRNA sequence

ATGGGGCTTGGAAAGACTGTTATGACAATTGCTCTTATACTTGCGAGGATGGGCAAAGGATGCCCTGATAACCAAAAGTCCACAGTGAATAAGAATGTAATCACAGAGAAAAAGAGTCAGAAATCCAGGACTAAAGCAAGGGGTGGCACCCTTATTGTTTGTCCAATGGCTTTGCTGGGTCAATGGAAGGAGGAACTTGAAATACATTCAGAACCTGAAAGTATTTCCATATTTGTTCATTATGGTGGTGATAGAACCAACAACCCAGAGGTGCTATCAGGATATGATGTTGTATTGACAACGTATGGTGTCCTAACATCGGCCTATAAGAGTGATGGAGAGTTTAGTATTTACCACAGAGTTGATTGGTACAGAGTTGTGTTAGATGAAGCCCATACAATTAAATCATCAAAGACACAAACTGCACAGGCTGCCTTTACACTTAACTCATATTGTCGCTGGTGTCTTACTGGAACCCCCCTCCAGAATAACTTGGAAGACCTTTTCAGCCTGTTGTGCTTCTTGCGAGTGGAACCGTGGTGCAATTGGGCATGGTGGAACAAGTTGATTCAAAGGCCTTATGAAAATGGTGATCCTAGAGGCTTGAGATTGATCAAGGCTATCCTAAGGCCACTTATGTTGAGGAGAACTAAAGATACAAAGGATGCAAACGGAAGGCCTATTCTTGTTCTCCCTCCTACCGATGTTCAAACCGTCACATGTGAACAGTCTGAGGCTGAACATGATTTTTATGATGCACTGTTTAAGAGATCAAAAGTCCAGTTTGACCAGTTTGTAGCACAAGGAAAGGTTCTCCACAACTATGCAAACATCCTCGAGCTCTTGCTTCGACTTAGGCAGTGTTGCAACCACCCATTCCTTGTAATGAGGTTGGAATAA

Coding sequence (CDS)

ATGGGGCTTGGAAAGACTGTTATGACAATTGCTCTTATACTTGCGAGGATGGGCAAAGGATGCCCTGATAACCAAAAGTCCACAGTGAATAAGAATGTAATCACAGAGAAAAAGAGTCAGAAATCCAGGACTAAAGCAAGGGGTGGCACCCTTATTGTTTGTCCAATGGCTTTGCTGGGTCAATGGAAGGAGGAACTTGAAATACATTCAGAACCTGAAAGTATTTCCATATTTGTTCATTATGGTGGTGATAGAACCAACAACCCAGAGGTGCTATCAGGATATGATGTTGTATTGACAACGTATGGTGTCCTAACATCGGCCTATAAGAGTGATGGAGAGTTTAGTATTTACCACAGAGTTGATTGGTACAGAGTTGTGTTAGATGAAGCCCATACAATTAAATCATCAAAGACACAAACTGCACAGGCTGCCTTTACACTTAACTCATATTGTCGCTGGTGTCTTACTGGAACCCCCCTCCAGAATAACTTGGAAGACCTTTTCAGCCTGTTGTGCTTCTTGCGAGTGGAACCGTGGTGCAATTGGGCATGGTGGAACAAGTTGATTCAAAGGCCTTATGAAAATGGTGATCCTAGAGGCTTGAGATTGATCAAGGCTATCCTAAGGCCACTTATGTTGAGGAGAACTAAAGATACAAAGGATGCAAACGGAAGGCCTATTCTTGTTCTCCCTCCTACCGATGTTCAAACCGTCACATGTGAACAGTCTGAGGCTGAACATGATTTTTATGATGCACTGTTTAAGAGATCAAAAGTCCAGTTTGACCAGTTTGTAGCACAAGGAAAGGTTCTCCACAACTATGCAAACATCCTCGAGCTCTTGCTTCGACTTAGGCAGTGTTGCAACCACCCATTCCTTGTAATGAGGTTGGAATAA

Protein sequence

MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMRLE*

Homology

[Close]

BLAST of MELO3C006447T1 vs. Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.0e-130
Identity = 223/302 (73.84%), Postives = 258/302 (85.43%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQK------SRTKARGGTLIVC 60
           MGLGKTVMTIALILAR G+G P+N+   V  +V  +K+++K      +  KA+GGTLI+C
Sbjct: 689 MGLGKTVMTIALILARPGRGNPENEDVLV-ADVNADKRNRKEIHMALTTVKAKGGTLIIC 748

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS+P+++S+ V+YGGDRT++ + ++ +DVVLTTYGVLTSAYK D  
Sbjct: 749 PMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSAYKQDMA 808

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SI+HR+DWYR+VLDEAHTIKS KTQ A+A F L+S+CRWCLTGTPLQN LEDL+SLLCF
Sbjct: 809 NSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCF 868

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW+KLIQ+PYENGDPRGL+LIKAILRPLMLRRTK+T+D  G  IL LPPT
Sbjct: 869 LHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPT 928

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 297
           DVQ + CEQSEAE DFY ALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL
Sbjct: 929 DVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 988

[Close]

BLAST of MELO3C006447T1 vs. Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.3e-101
Identity = 183/320 (57.19%), Postives = 230/320 (71.88%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKG------CPDNQKSTVNKNVITEKKS--------------- 60
           MGLGKTVMTI+L+LA   K       CP+ +   V  + + +  S               
Sbjct: 421 MGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRL 480

Query: 61  -QKSRTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVV 120
            ++      GG LIVCPM LLGQWK E+E+H++P S+S++VHYG  R  + ++LS  DVV
Sbjct: 481 LEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVV 540

Query: 121 LTTYGVLTSAYKSDG--EFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCL 180
           +TTYGVLTS +  +   +    + V W+R+VLDEAHTIK+SK+Q + AA  L +  RWCL
Sbjct: 541 ITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCL 600

Query: 181 TGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRR 240
           TGTP+QNNLEDL+SLL FLR+EPW  WAWWNKL+Q+P+E GD RGL+L+++IL+P+MLRR
Sbjct: 601 TGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRR 660

Query: 241 TKDTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYA 297
           TK + D  GRPILVLPP D + + CE SE+E DFYDALFKRSKV+FDQFV QGKVLHNYA
Sbjct: 661 TKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYA 720

[Close]

BLAST of MELO3C006447T1 vs. Swiss-Prot
Match: RAD5_GIBZE (DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-56
Identity = 120/314 (38.22%), Postives = 192/314 (61.15%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTV---NKNVITEK-KSQKSRTKARGGTLIVCPM 60
           MGLGKT+  ++L+     +   + ++S V   N N +T   K+ +S   A   TL+V PM
Sbjct: 521 MGLGKTIQMLSLVHTHRSEVALEARQSVVARSNVNQLTRLGKNSESILDAPCTTLVVAPM 580

Query: 61  ALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVL-------SGYDVVLTTYGVLTSAY 120
           +LL QW+ E E  S+  ++   ++YG ++++N + L       +  D+V+T+YGV+ S +
Sbjct: 581 SLLSQWQSEAEKASKDGTMKTELYYGNEKSSNLQALCCASNAANAPDLVITSYGVVLSEF 640

Query: 121 KS----DGEFSIYH---RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQ 180
            S    +G+ S ++    + ++R+++DEAH IK+  ++T++A + +++  RW LTGTP+ 
Sbjct: 641 SSLAARNGDKSFHNGLFSLRFFRIIIDEAHHIKNRSSKTSKACYEISATHRWALTGTPIV 700

Query: 181 NNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGD-PRGLRLIKAILRPLMLRRTKDTK 240
           N LEDLFSL+ FL VEPW N+++W   I  P+E+GD  R L +++ +L PL+LRRTKD K
Sbjct: 701 NKLEDLFSLVRFLGVEPWNNFSFWRTFITVPFESGDFMRALDVVQTVLEPLVLRRTKDMK 760

Query: 241 DANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILEL 296
             +G P+++LPP  ++ V  E SE E D Y+ +F ++K  F Q V  G V+  +  I   
Sbjct: 761 TPDGEPLVLLPPKQIEIVNVELSETERDVYNYIFNKAKRTFSQNVEAGTVMKAFTTIFAQ 820

[Close]

BLAST of MELO3C006447T1 vs. Swiss-Prot
Match: RAD5_ASPFU (DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rad5 PE=3 SV=2)

HSP 1 Score: 208.8 bits (530), Expect = 8.5e-53
Identity = 114/306 (37.25%), Postives = 178/306 (58.17%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 60
           MGLGKT+  ++LI +      P  Q  + +  ++    S  +   A   TL+V P +LL 
Sbjct: 566 MGLGKTIEMLSLIHSHRNVS-PSRQGPSSSTELVRMPSSSSAILPAPNTTLVVAPTSLLS 625

Query: 61  QWKEELEIHSEPESISIFVHYGGDRTNNPEVL------SGYDVVLTTYGVLTSAYKSDGE 120
           QW+ E    SE  ++ + ++YG D++ N + L      +  ++++T+YGV+ S  +    
Sbjct: 626 QWESEAMKASEQGTMKVLMYYGVDKSTNLQELCSAGNPAAPNIIITSYGVVLSESRQLAM 685

Query: 121 FSIYHR-----VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLF 180
           F+   +     VD++RV+LDEAH IK+ +++TA+A + L +  RW LTGTP+ N LEDLF
Sbjct: 686 FNSNTQGGLFSVDFFRVILDEAHVIKNRRSKTARACYELRATHRWVLTGTPIVNRLEDLF 745

Query: 181 SLLCFLRVEPWCNWAWWNKLIQRPYENGD-PRGLRLIKAILRPLMLRRTKDTKDANGRPI 240
           SL+ FL+VEPW N+++W   I  P+E+ D  R L +++ +L PL+LRRTK  K   G P+
Sbjct: 746 SLVRFLQVEPWNNFSFWKTFITVPFESKDYVRALNVVQTVLEPLVLRRTKTMKTPEGEPL 805

Query: 241 LVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQC 295
           + LP   +  V  E SE E + YD +F R+K  F+  +  G +L +++ I   +LRLRQ 
Sbjct: 806 VPLPRRTIDIVEVELSEQEREIYDYIFTRAKRTFNDNIEAGTLLKSFSTIFAQILRLRQT 865

[Close]

BLAST of MELO3C006447T1 vs. Swiss-Prot
Match: HLTF_HUMAN (Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 4.2e-52
Identity = 110/296 (37.16%), Postives = 173/296 (58.45%), Query Frame = 1


Query: 2   GLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGT-LIVCPMALLG 61
           G  K +  +A   A +    P  +K  + K     + S+K+  + R  T LI+CP+++L 
Sbjct: 430 GSSKVIEDVAFACA-LTSSVPTTKKKMLKKGACAVEGSKKTDVEERPRTTLIICPLSVLS 489

Query: 62  QWKEELEIHSEPE-SISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYH 121
            W ++   H + +  ++ +V+YG DR   P +LS  D+VLTTY +LT  Y + G+ S  H
Sbjct: 490 NWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILTHDYGTKGD-SPLH 549

Query: 122 RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEP 181
            + W RV+LDE H I++   Q  +A   L S  RW LTGTP+QN+L+DL+SLL FL+++P
Sbjct: 550 SIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKLKP 609

Query: 182 WCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTV 241
           + +  WW++ IQRP   GD  GLR ++++++ + LRRTK +K   G+P+L LP   V   
Sbjct: 610 FIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSK-IKGKPVLELPERKVFIQ 669

Query: 242 TCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLV 296
               S+ E   Y ++    +    ++  +G VL +YA++L LLLRLRQ C H +L+
Sbjct: 670 HITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLL 722

[Close]

BLAST of MELO3C006447T1 vs. TrEMBL
Match: A0A0A0L9Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141820 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 4.2e-168
Identity = 288/296 (97.30%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 60
           MGLGKTVMTIALILARMGKGCPDNQKSTVNK V TEKKSQKS TKARGGTLIVCPMALLG
Sbjct: 528 MGLGKTVMTIALILARMGKGCPDNQKSTVNKKVTTEKKSQKSTTKARGGTLIVCPMALLG 587

Query: 61  QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR 120
           QWKEELEIHSEPESISIFVHYGGDRTNNPEVL GYDVVLTTYGVLTSAYKSDGEFSIYHR
Sbjct: 588 QWKEELEIHSEPESISIFVHYGGDRTNNPEVLLGYDVVLTTYGVLTSAYKSDGEFSIYHR 647

Query: 121 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 180
           VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW
Sbjct: 648 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 707

Query: 181 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT 240
           CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDT DANGRPILVLPPTD+QTV 
Sbjct: 708 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTNDANGRPILVLPPTDIQTVM 767

Query: 241 CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
           CEQSEAEHDFYDALFK+SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 768 CEQSEAEHDFYDALFKKSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 823

[Close]

BLAST of MELO3C006447T1 vs. TrEMBL
Match: A5AF76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033485 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.6e-133
Identity = 238/303 (78.55%), Postives = 261/303 (86.14%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEK--KSQKSRTKA----RGGTLIVC 60
           MGLGKTVMTIALILAR G+      K        TE+  K+  S TKA    +GGTLIVC
Sbjct: 650 MGLGKTVMTIALILARPGRRSSGVHKLLTEAADDTEEAEKNTDSHTKAPLNVKGGTLIVC 709

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS+PESISIF+HYGGDRTN+P+V+S +DVVLTTYGVLTSAYK+D  
Sbjct: 710 PMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISEHDVVLTTYGVLTSAYKNDEN 769

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SI+HRV+WYRVVLDEAHTIKSSKT +AQAAF L S+CRWCLTGTPLQNNLEDL+SLLCF
Sbjct: 770 SSIFHRVEWYRVVLDEAHTIKSSKTLSAQAAFALPSHCRWCLTGTPLQNNLEDLYSLLCF 829

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW KLIQ+PYE GD RGLRLIKAILRPLMLRRTKDTKD  GRPILVLPPT
Sbjct: 830 LHVEPWCNWAWWYKLIQKPYECGDQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPT 889

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 298
           D+Q + CEQSEAEHDFYDALFKRSKV+FDQFV QG+VLHNYA+ILELLLRLRQCCNHPFL
Sbjct: 890 DIQVIECEQSEAEHDFYDALFKRSKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFL 949

[Close]

BLAST of MELO3C006447T1 vs. TrEMBL
Match: F6H8H8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g00150 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 9.8e-133
Identity = 237/302 (78.48%), Postives = 260/302 (86.09%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEK--KSQKSRTKA----RGGTLIVC 60
           MGLGKTVMTIALILAR G+      K        TE+  K+  S TKA    +GGTLIVC
Sbjct: 633 MGLGKTVMTIALILARPGRRSSGVHKLLTEAADDTEEAEKNTDSHTKAPLNVKGGTLIVC 692

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS+PESISIF+HYGGDRTN+P+V+S +DVVLTTYGVLTSAYK+D  
Sbjct: 693 PMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISEHDVVLTTYGVLTSAYKNDEN 752

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SI+HRV+WYRVVLDEAHTIKSSKT +AQAAF L S+CRWCLTGTPLQNNLEDL+SLLCF
Sbjct: 753 SSIFHRVEWYRVVLDEAHTIKSSKTLSAQAAFALPSHCRWCLTGTPLQNNLEDLYSLLCF 812

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW KLIQ+PYE GD RGLRLIKAILRPLMLRRTKDTKD  GRPILVLPPT
Sbjct: 813 LHVEPWCNWAWWYKLIQKPYECGDQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPT 872

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 297
           D+Q + CEQSEAEHDFYDALFKRSKV+FDQFV QG+VLHNYA+ILELLLRLRQCCNHPFL
Sbjct: 873 DIQVIECEQSEAEHDFYDALFKRSKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFL 932

[Close]

BLAST of MELO3C006447T1 vs. TrEMBL
Match: K4BDX0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.3e-132
Identity = 230/303 (75.91%), Postives = 261/303 (86.14%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSR-------TKARGGTLIV 60
           MGLGKTVMTI+LILA +G+G PD+Q+  +     TE  +++          KA+GGTLIV
Sbjct: 534 MGLGKTVMTISLILANLGRGSPDDQEIVLEDTDETECVTKRITYTDTEVSKKAKGGTLIV 593

Query: 61  CPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDG 120
           CPMALLGQWK+ELE HS+P S+S+FVHYGGDR+N+P V++  DVVLTTYGVL++ YK++ 
Sbjct: 594 CPMALLGQWKDELEAHSKPGSVSVFVHYGGDRSNDPRVIAEQDVVLTTYGVLSATYKANN 653

Query: 121 EFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLC 180
           E SI+H VDWYRVVLDEAHTIKS KT  AQAAFTL++YCRWCLTGTPLQNNLEDL+SLLC
Sbjct: 654 EKSIFHNVDWYRVVLDEAHTIKSWKTLGAQAAFTLSAYCRWCLTGTPLQNNLEDLYSLLC 713

Query: 181 FLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPP 240
           FL VEPWCNWAWWNKLIQRPYENGD R L+LIKAILRPLMLRRTKDTKD +GR ILVLPP
Sbjct: 714 FLHVEPWCNWAWWNKLIQRPYENGDQRALKLIKAILRPLMLRRTKDTKDKDGRAILVLPP 773

Query: 241 TDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPF 297
           TD+Q + C QSEAE DFYDALFKRSKVQFDQF+AQGKVLHNYANILELLLRLRQCCNHPF
Sbjct: 774 TDIQVIECTQSEAERDFYDALFKRSKVQFDQFLAQGKVLHNYANILELLLRLRQCCNHPF 833

[Close]

BLAST of MELO3C006447T1 vs. TrEMBL
Match: A0A0D2S976_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G248800 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.3e-132
Identity = 231/302 (76.49%), Postives = 259/302 (85.76%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNK---NVITEKKSQ---KSRTKARGGTLIVC 60
           MGLGKTVMTIALIL+R+G+G PDN+K    K   ++ T KK         +A+GGTLI+C
Sbjct: 521 MGLGKTVMTIALILSRLGRGNPDNEKPDSRKADGSITTNKKRDTYGSGPRRAKGGTLIIC 580

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS PE+ISIFVHYGGDRTN+P V+S +DVVLTTYGVLT+AYKSD E
Sbjct: 581 PMALLSQWKDELETHSRPETISIFVHYGGDRTNDPRVISEHDVVLTTYGVLTAAYKSDAE 640

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SIYHRVDWYRVVLDEAHTIKSSKT  A+A F L+++CRWCLTGTP+QNNLEDL+SLLCF
Sbjct: 641 NSIYHRVDWYRVVLDEAHTIKSSKTLGARACFALSAHCRWCLTGTPIQNNLEDLYSLLCF 700

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW   IQ PYENG+P GL+ IKAILR LMLRRTK+TKD  GRPILVLPPT
Sbjct: 701 LHVEPWCNWAWWKTKIQGPYENGNPTGLKWIKAILRLLMLRRTKETKDKEGRPILVLPPT 760

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 297
           D+Q + CEQSEAE DFYDALFKRSKVQFDQFVAQG+VLHNYA+ILELLLRLRQCCNHPFL
Sbjct: 761 DIQVIECEQSEAERDFYDALFKRSKVQFDQFVAQGRVLHNYASILELLLRLRQCCNHPFL 820

[Close]

BLAST of MELO3C006447T1 vs. TAIR10
Match: AT5G43530.1 (AT5G43530.1 Helicase protein with RING/U-box domain)

HSP 1 Score: 467.6 bits (1202), Expect = 5.7e-132
Identity = 223/302 (73.84%), Postives = 258/302 (85.43%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQK------SRTKARGGTLIVC 60
           MGLGKTVMTIALILAR G+G P+N+   V  +V  +K+++K      +  KA+GGTLI+C
Sbjct: 689 MGLGKTVMTIALILARPGRGNPENEDVLV-ADVNADKRNRKEIHMALTTVKAKGGTLIIC 748

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS+P+++S+ V+YGGDRT++ + ++ +DVVLTTYGVLTSAYK D  
Sbjct: 749 PMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSAYKQDMA 808

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SI+HR+DWYR+VLDEAHTIKS KTQ A+A F L+S+CRWCLTGTPLQN LEDL+SLLCF
Sbjct: 809 NSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCF 868

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW+KLIQ+PYENGDPRGL+LIKAILRPLMLRRTK+T+D  G  IL LPPT
Sbjct: 869 LHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPT 928

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 297
           DVQ + CEQSEAE DFY ALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL
Sbjct: 929 DVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 988

[Close]

BLAST of MELO3C006447T1 vs. TAIR10
Match: AT5G22750.1 (AT5G22750.1 DNA/RNA helicase protein)

HSP 1 Score: 370.9 bits (951), Expect = 7.3e-103
Identity = 183/320 (57.19%), Postives = 230/320 (71.88%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKG------CPDNQKSTVNKNVITEKKS--------------- 60
           MGLGKTVMTI+L+LA   K       CP+ +   V  + + +  S               
Sbjct: 421 MGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRL 480

Query: 61  -QKSRTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVV 120
            ++      GG LIVCPM LLGQWK E+E+H++P S+S++VHYG  R  + ++LS  DVV
Sbjct: 481 LEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVV 540

Query: 121 LTTYGVLTSAYKSDG--EFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCL 180
           +TTYGVLTS +  +   +    + V W+R+VLDEAHTIK+SK+Q + AA  L +  RWCL
Sbjct: 541 ITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCL 600

Query: 181 TGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRR 240
           TGTP+QNNLEDL+SLL FLR+EPW  WAWWNKL+Q+P+E GD RGL+L+++IL+P+MLRR
Sbjct: 601 TGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRR 660

Query: 241 TKDTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYA 297
           TK + D  GRPILVLPP D + + CE SE+E DFYDALFKRSKV+FDQFV QGKVLHNYA
Sbjct: 661 TKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYA 720

[Close]

BLAST of MELO3C006447T1 vs. TAIR10
Match: AT5G05130.1 (AT5G05130.1 DNA/RNA helicase protein)

HSP 1 Score: 189.5 bits (480), Expect = 3.0e-48
Identity = 105/314 (33.44%), Postives = 167/314 (53.18%), Query Frame = 1


Query: 1   MGLGKTVMTIALIL----ARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGG------- 60
           MGLGKT+  ++LI            P  +      + I +K  ++ R K+          
Sbjct: 268 MGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLK 327

Query: 61  -------------TLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYD 120
                        TLIVCP +++  W  +LE H+ P  + +++++GG+RT++   L  YD
Sbjct: 328 TDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYD 387

Query: 121 VVLTTYGVLTSAYKSDGEFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCL 180
           +VLTTYG L  A +   E S   +++W R++LDEAHTIK++  Q ++    L +  RW +
Sbjct: 388 IVLTTYGTL--AVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAV 447

Query: 181 TGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRR 240
           TGTP+QN   DL+SL+ FLR EP+   ++W  LIQRP   G+ +GL  ++ ++  + LRR
Sbjct: 448 TGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRR 507

Query: 241 TKDTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYA 291
           TK+      + ++ LPP  V+T   E S  E   YD +   +K      +  G ++ NY+
Sbjct: 508 TKE------KSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYS 567

[Close]

BLAST of MELO3C006447T1 vs. TAIR10
Match: AT3G16600.1 (AT3G16600.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 171.8 bits (434), Expect = 6.5e-43
Identity = 112/317 (35.33%), Postives = 159/317 (50.16%), Query Frame = 1


Query: 2   GLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLGQ 61
           GLGKT+ TI+LIL +  K               ++ K +K + +  GGTLIVCP +++ Q
Sbjct: 84  GLGKTISTISLILLQKLK---------------SQSKQRKRKGQNSGGTLIVCPASVVKQ 143

Query: 62  WKEEL-EIHSEPESISIFVHYGGDRTNNPEVLSGYDVV----------------LTTYGV 121
           W  E+ E  S+   +S+ VH+G  RT +P  ++ YDVV                L  Y  
Sbjct: 144 WAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQNPMLNRYDS 203

Query: 122 LTSAYKSDGEFSIYH------RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTG 181
           +      DG   I        RV W RVVLDEAHTIK+ +T  A+A F+L +  RWCLTG
Sbjct: 204 MRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTG 263

Query: 182 TPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTK 241
           TP++N ++DL+S   FLR  P+     +++ I+ P +     G + ++AILR +MLRRTK
Sbjct: 264 TPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKPLHGYKKLQAILRGIMLRRTK 323

Query: 242 DTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANI 296
                                       E  FY  L   S+ +F+++ A G +  + A +
Sbjct: 324 ----------------------------EWSFYRKLELNSRWKFEEYAADGTLHEHMAYL 357

[Close]

BLAST of MELO3C006447T1 vs. TAIR10
Match: AT1G61140.1 (AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-38
Identity = 76/176 (43.18%), Postives = 113/176 (64.20%), Query Frame = 1


Query: 120 RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEP 179
           +V W+RVVLDEA +IK+ KTQ A+A + L +  RWCL+GTP+QN+++DL+S   FL+ +P
Sbjct: 784 KVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDP 843

Query: 180 WCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTV 239
           + ++  +   I+ P      +G + ++AIL+ +MLRRTK +   +G+PI+ LPP  ++  
Sbjct: 844 YSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSL-LDGKPIISLPPKSIELR 903

Query: 240 TCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLV 296
             + +  E DFY  L   S+ QF ++   G V  NY NIL +LLRLRQ C+HP LV
Sbjct: 904 KVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV 958

HSP 2 Score: 65.5 bits (158), Expect = 6.5e-11
Identity = 42/138 (30.43%), Postives = 64/138 (46.38%), Query Frame = 1


Query: 2   GLGKTVMTIALILARMGK---GCPDNQKSTV----------------------------- 61
           GLGKTV TIALIL    K    C ++ K  +                             
Sbjct: 587 GLGKTVSTIALILKERSKPAQACEESTKKEIFDLESETGECAPLKPSGRSKHFEHSQLLS 646

Query: 62  NKNVITEKKSQKSRTKARGGTLIVCPMALLGQWKEELEIHSEPES-ISIFVHYGGDRTNN 107
           N+N +      K   +   GTL+VCP +++ QW +EL      E+ +S+ V++G  RT +
Sbjct: 647 NENKVGGDSVGKVTGRPAAGTLVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKD 706

[Close]

BLAST of MELO3C006447T1 vs. NCBI nr
Match: gi|659076202|ref|XP_008438555.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Cucumis melo])

HSP 1 Score: 613.2 bits (1580), Expect = 2.4e-172
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 60
           MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG
Sbjct: 531 MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 590

Query: 61  QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR 120
           QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR
Sbjct: 591 QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR 650

Query: 121 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 180
           VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW
Sbjct: 651 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 710

Query: 181 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT 240
           CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT
Sbjct: 711 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT 770

Query: 241 CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
           CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 771 CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 826

[Close]

BLAST of MELO3C006447T1 vs. NCBI nr
Match: gi|449433265|ref|XP_004134418.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Cucumis sativus])

HSP 1 Score: 598.6 bits (1542), Expect = 6.1e-168
Identity = 288/296 (97.30%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 60
           MGLGKTVMTIALILARMGKGCPDNQKSTVNK V TEKKSQKS TKARGGTLIVCPMALLG
Sbjct: 528 MGLGKTVMTIALILARMGKGCPDNQKSTVNKKVTTEKKSQKSTTKARGGTLIVCPMALLG 587

Query: 61  QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR 120
           QWKEELEIHSEPESISIFVHYGGDRTNNPEVL GYDVVLTTYGVLTSAYKSDGEFSIYHR
Sbjct: 588 QWKEELEIHSEPESISIFVHYGGDRTNNPEVLLGYDVVLTTYGVLTSAYKSDGEFSIYHR 647

Query: 121 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 180
           VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW
Sbjct: 648 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 707

Query: 181 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT 240
           CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDT DANGRPILVLPPTD+QTV 
Sbjct: 708 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTNDANGRPILVLPPTDIQTVM 767

Query: 241 CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
           CEQSEAEHDFYDALFK+SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 768 CEQSEAEHDFYDALFKKSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 823

[Close]

BLAST of MELO3C006447T1 vs. NCBI nr
Match: gi|747087285|ref|XP_011091178.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Sesamum indicum])

HSP 1 Score: 488.8 bits (1257), Expect = 6.8e-135
Identity = 238/306 (77.78%), Postives = 267/306 (87.25%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQ----------KSRTKARGGT 60
           MGLGKTVMTIALILAR G+G      + V++ VITE +++          ++  KA GGT
Sbjct: 578 MGLGKTVMTIALILARRGRG------TRVDQQVITEGETKIEHIKISQTTEASKKANGGT 637

Query: 61  LIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYK 120
           LIVCPMALLGQWK+ELE HS+P+SIS+FVHYGG+R N+P+V++  DVVLTTYGVLTSAYK
Sbjct: 638 LIVCPMALLGQWKDELETHSKPDSISVFVHYGGERANDPKVIAEPDVVLTTYGVLTSAYK 697

Query: 121 SDGEFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFS 180
           +D   SI+H+V+WYRVVLDEAHTIKSSKTQ AQAAF L+SYCRWCLTGTPLQNNLEDL+S
Sbjct: 698 NDSINSIFHQVEWYRVVLDEAHTIKSSKTQGAQAAFGLSSYCRWCLTGTPLQNNLEDLYS 757

Query: 181 LLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILV 240
           LLCFL VEPWCNWAWWNKLIQRPYENGD RGL+L+KAILRPLMLRRTK++KD  GRPILV
Sbjct: 758 LLCFLHVEPWCNWAWWNKLIQRPYENGDKRGLKLVKAILRPLMLRRTKESKDKEGRPILV 817

Query: 241 LPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCN 297
           LPPTD+Q V CEQSEAEHDFY ALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCN
Sbjct: 818 LPPTDIQVVECEQSEAEHDFYGALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCN 877

[Close]

BLAST of MELO3C006447T1 vs. NCBI nr
Match: gi|604327026|gb|EYU32975.1| (hypothetical protein MIMGU_mgv1a024873mg, partial [Erythranthe guttata])

HSP 1 Score: 483.4 bits (1243), Expect = 2.8e-133
Identity = 230/297 (77.44%), Postives = 262/297 (88.22%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPD-NQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALL 60
           MGLGKTVMTIALILA  G+G  D +++  +N +   E +   + +K +GGTLI+CPMALL
Sbjct: 663 MGLGKTVMTIALILANRGRGGQDVDEQVIINGSDNIENRRLTNESKPKGGTLIICPMALL 722

Query: 61  GQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYH 120
            QWK+ELE HS+ +SIS+FVHYGGDRTN+P +++  DVVLTTYGVLTSAYK+D   SI++
Sbjct: 723 SQWKDELETHSKKDSISVFVHYGGDRTNDPSMIAEPDVVLTTYGVLTSAYKTDSTNSIFN 782

Query: 121 RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEP 180
           RV+W+RVVLDEAHTIKSSKTQ AQAAF L+SYCRWCLTGTPLQNNLEDL+SLLCFL VEP
Sbjct: 783 RVEWHRVVLDEAHTIKSSKTQGAQAAFALSSYCRWCLTGTPLQNNLEDLYSLLCFLHVEP 842

Query: 181 WCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTV 240
           WCNWAWWNKLIQRPYENGD RGL+L+KAILRPLMLRRTK++KD  GR ILVLPPTD+Q +
Sbjct: 843 WCNWAWWNKLIQRPYENGDQRGLKLVKAILRPLMLRRTKESKDKEGRAILVLPPTDIQVI 902

Query: 241 TCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
            CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 903 ECEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 959

[Close]

BLAST of MELO3C006447T1 vs. NCBI nr
Match: gi|848884816|ref|XP_012842667.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Erythranthe guttata])

HSP 1 Score: 483.4 bits (1243), Expect = 2.8e-133
Identity = 230/297 (77.44%), Postives = 262/297 (88.22%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPD-NQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALL 60
           MGLGKTVMTIALILA  G+G  D +++  +N +   E +   + +K +GGTLI+CPMALL
Sbjct: 681 MGLGKTVMTIALILANRGRGGQDVDEQVIINGSDNIENRRLTNESKPKGGTLIICPMALL 740

Query: 61  GQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYH 120
            QWK+ELE HS+ +SIS+FVHYGGDRTN+P +++  DVVLTTYGVLTSAYK+D   SI++
Sbjct: 741 SQWKDELETHSKKDSISVFVHYGGDRTNDPSMIAEPDVVLTTYGVLTSAYKTDSTNSIFN 800

Query: 121 RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEP 180
           RV+W+RVVLDEAHTIKSSKTQ AQAAF L+SYCRWCLTGTPLQNNLEDL+SLLCFL VEP
Sbjct: 801 RVEWHRVVLDEAHTIKSSKTQGAQAAFALSSYCRWCLTGTPLQNNLEDLYSLLCFLHVEP 860

Query: 181 WCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTV 240
           WCNWAWWNKLIQRPYENGD RGL+L+KAILRPLMLRRTK++KD  GR ILVLPPTD+Q +
Sbjct: 861 WCNWAWWNKLIQRPYENGDQRGLKLVKAILRPLMLRRTKESKDKEGRAILVLPPTDIQVI 920

Query: 241 TCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
            CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 921 ECEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 977

The following BLAST results are available for this feature:

BLAST of MELO3C006447T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SM3L3_ARATH	1.0e-130	73.84	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati...	[more]
SM3L2_ARATH	1.3e-101	57.19	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati...	[more]
RAD5_GIBZE	6.3e-56	38.22	DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9...	[more]
RAD5_ASPFU	8.5e-53	37.25	DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / ...	[more]
HLTF_HUMAN	4.2e-52	37.16	Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2	[more]

BLAST of MELO3C006447T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9Y2_CUCSA	4.2e-168	97.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141820 PE=4 SV=1	[more]
A5AF76_VITVI	2.6e-133	78.55	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033485 PE=4 SV=1	[more]
F6H8H8_VITVI	9.8e-133	78.48	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g00150 PE=4 SV=...	[more]
K4BDX0_SOLLC	1.3e-132	75.91	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0D2S976_GOSRA	1.3e-132	76.49	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G248800 PE=4 SV=1	[more]

BLAST of MELO3C006447T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43530.1	5.7e-132	73.84	Helicase protein with RING/U-box domain	[more]
AT5G22750.1	7.3e-103	57.19	DNA/RNA helicase protein	[more]
AT5G05130.1	3.0e-48	33.44	DNA/RNA helicase protein	[more]
AT3G16600.1	6.5e-43	35.33	SNF2 domain-containing protein / helicase domain-containing protein ...	[more]
AT1G61140.1	3.7e-38	43.18	SNF2 domain-containing protein / helicase domain-containing protein ...	[more]

BLAST of MELO3C006447T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076202\|ref\|XP_008438555.1\|	2.4e-172	100.00	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ...	[more]
gi\|449433265\|ref\|XP_004134418.1\|	6.1e-168	97.30	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ...	[more]
gi\|747087285\|ref\|XP_011091178.1\|	6.8e-135	77.78	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ...	[more]
gi\|604327026\|gb\|EYU32975.1\|	2.8e-133	77.44	hypothetical protein MIMGU_mgv1a024873mg, partial [Erythranthe guttata]	[more]
gi\|848884816\|ref\|XP_012842667.1\|	2.8e-133	77.44	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000330	SNF2_N
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006447	MELO3C006447	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006447T1	MELO3C006447T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006447T1.cds1	MELO3C006447T1.cds1	CDS
MELO3C006447T1.cds2	MELO3C006447T1.cds2	CDS
MELO3C006447T1.cds3	MELO3C006447T1.cds3	CDS
MELO3C006447T1.cds4	MELO3C006447T1.cds4	CDS
MELO3C006447T1.cds5	MELO3C006447T1.cds5	CDS
MELO3C006447T1.cds6	MELO3C006447T1.cds6	CDS
MELO3C006447T1.cds7	MELO3C006447T1.cds7	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000330	SNF2-related, N-terminal domain	PFAM	PF00176	SNF2_N	coord: 1..295 score: 4.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 1..195 score: 5.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 1..178 score: 18
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 1..175 score: 1.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..216 score: 1.01E-42coord: 228..295 score: 4.1
None	No IPR available	PANTHER	PTHR10799	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED	coord: 1..295 score: 1.6E
None	No IPR available	PANTHER	PTHR10799:SF779	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED	coord: 1..295 score: 1.6E