MELO3C006447 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006447
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA/RNA helicase protein
Location	chr6 : 3288046 .. 3289846 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTTGGAAAGACTGTTATGACAATTGCTCTTATACTTGCGAGGATGGGCAAAGGATGCCCTGATAACCAAAAGTCCACAGTGAATAAGAATGTAATCACAGAGAAAAAGAGTCAGAAATCCAGGACTAAAGCAAGGGGTGGCACCCTTATTGTTTGTCCAATGGCTTTGCTGGGTCAATGGAAGGTACATACGCTCTGCAAATTCATGAGGTCCTTTTGTTTTAAGTCCAAAAGCTTGATTAACTTTACATTTAGTGATGCTGAAATGAACTGGGTTGATCTAGCTAGTAGTATAGTAATGACTACCAAACTGAACAATAAAACGCAATTGCATTTCTTAAACTTATGATTTGACCGAATTTTGCTACTGCAGGAGGAACTTGAAATACATTCAGAACCTGAAAGTATTTCCATATTTGTTCATTATGGTGGTGATAGAACCAACAACCCAGAGGTGCTATCAGGATATGATGTTGTATTGACAACGTATGGTGTCCTAACATCGGCCTATAAGAGTGTGAGTATTTGTTTATAAGCTAGTTTCAACTTTATAGTATACATGTTGACACTAGTCAAACCTCTTATTCATTATCCAATATTATTAACTTTTCTATCTGTTTTATTGTCCATTCACTTCTAATTCAGGATGGAGAGTTTAGTATTTACCACAGAGTTGATTGGTACAGAGTTGTGTTAGATGAAGCCCATACAATTAAATCATCAAAGACACAAACTGCACAGGCTGCCTTTACACTTAACTCATATTGTCGCTGGTGTCTTACTGGAACCCCCCTCCAGGTCCAATTCCCAACTTTTTTCCTACTATTTTATCAATATCGTTCTCCTTGGGCATATGTGGCTTCCGAAACAAATTATAGATAGTCTTTCTTTCATATTTGTTTTGCTCCATAAACTTGGCATCTCTTATCCATCCTTTTTAAGAGAGTAAAACGAATAGTCAGAAGATAAGGATTATTTTATAATTTGTGGTCTAGCATCTTATTGAAAACCGTATTTCTTGCTACAGAATAACTTGGAAGACCTTTTCAGCCTGTTGTGCTTCTTGCGAGTGGAACCGTGGTGCAATTGGGCATGGTATGGCAGTTTTAATTCTCTCTTTTTCAGCACACATATTTTAGTTTTAAGTTGGATTGGTCATGCCGAATCTTCTATCCCCTCATTTGCATTTTGGCTTTAATTAGGTGGAACAAGTTGATTCAAAGGCCTTATGAAAATGGTGATCCTAGAGGCTTGAGATTGATCAAGGCTATCCTAAGGCCACTTATGTTGAGGAGAACTAAAGATACAAAGGATGCAAACGGAAGGTAGTTCTTACGTTCTTGCAACATTCTCACAATATAAAGTTCCCCCCCGGATCTAAAGCATGTGACATTTAACTCATCTGATGCAGGCCTATTCTTGTTCTCCCTCCTACCGATGTTCAAACCGTCACATGTGAACAGTCTGAGGCTGAACATGATTTTTATGATGCACTGTTTAAGAGATCAAAAGTAAGTTTTCTTAGAGTAGATTGCTCTTTCGATATACTAAACTGAAGAAGCGAAGAAAAATCTAACACCTTATTCTTTTTCCCTGTCAATTTCACAAGTAGATTAGTGGCTTTCTTTTATCCTTAAATATGTTACTCACTATCCCTTTATTTGAATCAACAGGTCCAGTTTGACCAGTTTGTAGCACAAGGAAAGGTTCTCCACAACTATGCAAACATCCTCGAGCTCTTGCTTCGACTTAGGCAGTGTTGCAACCACCCATTCCTTGTAATGAGGTTGGAATAA

mRNA sequence

ATGGGGCTTGGAAAGACTGTTATGACAATTGCTCTTATACTTGCGAGGATGGGCAAAGGATGCCCTGATAACCAAAAGTCCACAGTGAATAAGAATGTAATCACAGAGAAAAAGAGTCAGAAATCCAGGACTAAAGCAAGGGGTGGCACCCTTATTGTTTGTCCAATGGCTTTGCTGGGTCAATGGAAGGAGGAACTTGAAATACATTCAGAACCTGAAAGTATTTCCATATTTGTTCATTATGGTGGTGATAGAACCAACAACCCAGAGGTGCTATCAGGATATGATGTTGTATTGACAACGTATGGTGTCCTAACATCGGCCTATAAGAGTGATGGAGAGTTTAGTATTTACCACAGAGTTGATTGGTACAGAGTTGTGTTAGATGAAGCCCATACAATTAAATCATCAAAGACACAAACTGCACAGGCTGCCTTTACACTTAACTCATATTGTCGCTGGTGTCTTACTGGAACCCCCCTCCAGAATAACTTGGAAGACCTTTTCAGCCTGTTGTGCTTCTTGCGAGTGGAACCGTGGTGCAATTGGGCATGGTGGAACAAGTTGATTCAAAGGCCTTATGAAAATGGTGATCCTAGAGGCTTGAGATTGATCAAGGCTATCCTAAGGCCACTTATGTTGAGGAGAACTAAAGATACAAAGGATGCAAACGGAAGGCCTATTCTTGTTCTCCCTCCTACCGATGTTCAAACCGTCACATGTGAACAGTCTGAGGCTGAACATGATTTTTATGATGCACTGTTTAAGAGATCAAAAGTCCAGTTTGACCAGTTTGTAGCACAAGGAAAGGTTCTCCACAACTATGCAAACATCCTCGAGCTCTTGCTTCGACTTAGGCAGTGTTGCAACCACCCATTCCTTGTAATGAGGTTGGAATAA

Coding sequence (CDS)

ATGGGGCTTGGAAAGACTGTTATGACAATTGCTCTTATACTTGCGAGGATGGGCAAAGGATGCCCTGATAACCAAAAGTCCACAGTGAATAAGAATGTAATCACAGAGAAAAAGAGTCAGAAATCCAGGACTAAAGCAAGGGGTGGCACCCTTATTGTTTGTCCAATGGCTTTGCTGGGTCAATGGAAGGAGGAACTTGAAATACATTCAGAACCTGAAAGTATTTCCATATTTGTTCATTATGGTGGTGATAGAACCAACAACCCAGAGGTGCTATCAGGATATGATGTTGTATTGACAACGTATGGTGTCCTAACATCGGCCTATAAGAGTGATGGAGAGTTTAGTATTTACCACAGAGTTGATTGGTACAGAGTTGTGTTAGATGAAGCCCATACAATTAAATCATCAAAGACACAAACTGCACAGGCTGCCTTTACACTTAACTCATATTGTCGCTGGTGTCTTACTGGAACCCCCCTCCAGAATAACTTGGAAGACCTTTTCAGCCTGTTGTGCTTCTTGCGAGTGGAACCGTGGTGCAATTGGGCATGGTGGAACAAGTTGATTCAAAGGCCTTATGAAAATGGTGATCCTAGAGGCTTGAGATTGATCAAGGCTATCCTAAGGCCACTTATGTTGAGGAGAACTAAAGATACAAAGGATGCAAACGGAAGGCCTATTCTTGTTCTCCCTCCTACCGATGTTCAAACCGTCACATGTGAACAGTCTGAGGCTGAACATGATTTTTATGATGCACTGTTTAAGAGATCAAAAGTCCAGTTTGACCAGTTTGTAGCACAAGGAAAGGTTCTCCACAACTATGCAAACATCCTCGAGCTCTTGCTTCGACTTAGGCAGTGTTGCAACCACCCATTCCTTGTAATGAGGTTGGAATAA

Protein sequence

MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMRLE*

Homology

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BLAST of MELO3C006447 vs. Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.0e-130
Identity = 223/302 (73.84%), Postives = 258/302 (85.43%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQK------SRTKARGGTLIVC 60
           MGLGKTVMTIALILAR G+G P+N+   V  +V  +K+++K      +  KA+GGTLI+C
Sbjct: 689 MGLGKTVMTIALILARPGRGNPENEDVLV-ADVNADKRNRKEIHMALTTVKAKGGTLIIC 748

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS+P+++S+ V+YGGDRT++ + ++ +DVVLTTYGVLTSAYK D  
Sbjct: 749 PMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSAYKQDMA 808

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SI+HR+DWYR+VLDEAHTIKS KTQ A+A F L+S+CRWCLTGTPLQN LEDL+SLLCF
Sbjct: 809 NSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCF 868

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW+KLIQ+PYENGDPRGL+LIKAILRPLMLRRTK+T+D  G  IL LPPT
Sbjct: 869 LHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPT 928

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 297
           DVQ + CEQSEAE DFY ALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL
Sbjct: 929 DVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 988

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BLAST of MELO3C006447 vs. Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.3e-101
Identity = 183/320 (57.19%), Postives = 230/320 (71.88%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKG------CPDNQKSTVNKNVITEKKS--------------- 60
           MGLGKTVMTI+L+LA   K       CP+ +   V  + + +  S               
Sbjct: 421 MGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRL 480

Query: 61  -QKSRTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVV 120
            ++      GG LIVCPM LLGQWK E+E+H++P S+S++VHYG  R  + ++LS  DVV
Sbjct: 481 LEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVV 540

Query: 121 LTTYGVLTSAYKSDG--EFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCL 180
           +TTYGVLTS +  +   +    + V W+R+VLDEAHTIK+SK+Q + AA  L +  RWCL
Sbjct: 541 ITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCL 600

Query: 181 TGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRR 240
           TGTP+QNNLEDL+SLL FLR+EPW  WAWWNKL+Q+P+E GD RGL+L+++IL+P+MLRR
Sbjct: 601 TGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRR 660

Query: 241 TKDTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYA 297
           TK + D  GRPILVLPP D + + CE SE+E DFYDALFKRSKV+FDQFV QGKVLHNYA
Sbjct: 661 TKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYA 720

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BLAST of MELO3C006447 vs. Swiss-Prot
Match: RAD5_GIBZE (DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-56
Identity = 120/314 (38.22%), Postives = 192/314 (61.15%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTV---NKNVITEK-KSQKSRTKARGGTLIVCPM 60
           MGLGKT+  ++L+     +   + ++S V   N N +T   K+ +S   A   TL+V PM
Sbjct: 521 MGLGKTIQMLSLVHTHRSEVALEARQSVVARSNVNQLTRLGKNSESILDAPCTTLVVAPM 580

Query: 61  ALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVL-------SGYDVVLTTYGVLTSAY 120
           +LL QW+ E E  S+  ++   ++YG ++++N + L       +  D+V+T+YGV+ S +
Sbjct: 581 SLLSQWQSEAEKASKDGTMKTELYYGNEKSSNLQALCCASNAANAPDLVITSYGVVLSEF 640

Query: 121 KS----DGEFSIYH---RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQ 180
            S    +G+ S ++    + ++R+++DEAH IK+  ++T++A + +++  RW LTGTP+ 
Sbjct: 641 SSLAARNGDKSFHNGLFSLRFFRIIIDEAHHIKNRSSKTSKACYEISATHRWALTGTPIV 700

Query: 181 NNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGD-PRGLRLIKAILRPLMLRRTKDTK 240
           N LEDLFSL+ FL VEPW N+++W   I  P+E+GD  R L +++ +L PL+LRRTKD K
Sbjct: 701 NKLEDLFSLVRFLGVEPWNNFSFWRTFITVPFESGDFMRALDVVQTVLEPLVLRRTKDMK 760

Query: 241 DANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILEL 296
             +G P+++LPP  ++ V  E SE E D Y+ +F ++K  F Q V  G V+  +  I   
Sbjct: 761 TPDGEPLVLLPPKQIEIVNVELSETERDVYNYIFNKAKRTFSQNVEAGTVMKAFTTIFAQ 820

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BLAST of MELO3C006447 vs. Swiss-Prot
Match: RAD5_ASPFU (DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rad5 PE=3 SV=2)

HSP 1 Score: 208.8 bits (530), Expect = 8.5e-53
Identity = 114/306 (37.25%), Postives = 178/306 (58.17%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 60
           MGLGKT+  ++LI +      P  Q  + +  ++    S  +   A   TL+V P +LL 
Sbjct: 566 MGLGKTIEMLSLIHSHRNVS-PSRQGPSSSTELVRMPSSSSAILPAPNTTLVVAPTSLLS 625

Query: 61  QWKEELEIHSEPESISIFVHYGGDRTNNPEVL------SGYDVVLTTYGVLTSAYKSDGE 120
           QW+ E    SE  ++ + ++YG D++ N + L      +  ++++T+YGV+ S  +    
Sbjct: 626 QWESEAMKASEQGTMKVLMYYGVDKSTNLQELCSAGNPAAPNIIITSYGVVLSESRQLAM 685

Query: 121 FSIYHR-----VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLF 180
           F+   +     VD++RV+LDEAH IK+ +++TA+A + L +  RW LTGTP+ N LEDLF
Sbjct: 686 FNSNTQGGLFSVDFFRVILDEAHVIKNRRSKTARACYELRATHRWVLTGTPIVNRLEDLF 745

Query: 181 SLLCFLRVEPWCNWAWWNKLIQRPYENGD-PRGLRLIKAILRPLMLRRTKDTKDANGRPI 240
           SL+ FL+VEPW N+++W   I  P+E+ D  R L +++ +L PL+LRRTK  K   G P+
Sbjct: 746 SLVRFLQVEPWNNFSFWKTFITVPFESKDYVRALNVVQTVLEPLVLRRTKTMKTPEGEPL 805

Query: 241 LVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQC 295
           + LP   +  V  E SE E + YD +F R+K  F+  +  G +L +++ I   +LRLRQ 
Sbjct: 806 VPLPRRTIDIVEVELSEQEREIYDYIFTRAKRTFNDNIEAGTLLKSFSTIFAQILRLRQT 865

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BLAST of MELO3C006447 vs. Swiss-Prot
Match: HLTF_HUMAN (Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 4.2e-52
Identity = 110/296 (37.16%), Postives = 173/296 (58.45%), Query Frame = 1


Query: 2   GLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGT-LIVCPMALLG 61
           G  K +  +A   A +    P  +K  + K     + S+K+  + R  T LI+CP+++L 
Sbjct: 430 GSSKVIEDVAFACA-LTSSVPTTKKKMLKKGACAVEGSKKTDVEERPRTTLIICPLSVLS 489

Query: 62  QWKEELEIHSEPE-SISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYH 121
            W ++   H + +  ++ +V+YG DR   P +LS  D+VLTTY +LT  Y + G+ S  H
Sbjct: 490 NWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILTHDYGTKGD-SPLH 549

Query: 122 RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEP 181
            + W RV+LDE H I++   Q  +A   L S  RW LTGTP+QN+L+DL+SLL FL+++P
Sbjct: 550 SIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKLKP 609

Query: 182 WCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTV 241
           + +  WW++ IQRP   GD  GLR ++++++ + LRRTK +K   G+P+L LP   V   
Sbjct: 610 FIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSK-IKGKPVLELPERKVFIQ 669

Query: 242 TCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLV 296
               S+ E   Y ++    +    ++  +G VL +YA++L LLLRLRQ C H +L+
Sbjct: 670 HITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLL 722

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BLAST of MELO3C006447 vs. TrEMBL
Match: A0A0A0L9Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141820 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 4.2e-168
Identity = 288/296 (97.30%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 60
           MGLGKTVMTIALILARMGKGCPDNQKSTVNK V TEKKSQKS TKARGGTLIVCPMALLG
Sbjct: 528 MGLGKTVMTIALILARMGKGCPDNQKSTVNKKVTTEKKSQKSTTKARGGTLIVCPMALLG 587

Query: 61  QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR 120
           QWKEELEIHSEPESISIFVHYGGDRTNNPEVL GYDVVLTTYGVLTSAYKSDGEFSIYHR
Sbjct: 588 QWKEELEIHSEPESISIFVHYGGDRTNNPEVLLGYDVVLTTYGVLTSAYKSDGEFSIYHR 647

Query: 121 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 180
           VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW
Sbjct: 648 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 707

Query: 181 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT 240
           CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDT DANGRPILVLPPTD+QTV 
Sbjct: 708 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTNDANGRPILVLPPTDIQTVM 767

Query: 241 CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
           CEQSEAEHDFYDALFK+SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 768 CEQSEAEHDFYDALFKKSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 823

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BLAST of MELO3C006447 vs. TrEMBL
Match: A5AF76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033485 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.6e-133
Identity = 238/303 (78.55%), Postives = 261/303 (86.14%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEK--KSQKSRTKA----RGGTLIVC 60
           MGLGKTVMTIALILAR G+      K        TE+  K+  S TKA    +GGTLIVC
Sbjct: 650 MGLGKTVMTIALILARPGRRSSGVHKLLTEAADDTEEAEKNTDSHTKAPLNVKGGTLIVC 709

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS+PESISIF+HYGGDRTN+P+V+S +DVVLTTYGVLTSAYK+D  
Sbjct: 710 PMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISEHDVVLTTYGVLTSAYKNDEN 769

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SI+HRV+WYRVVLDEAHTIKSSKT +AQAAF L S+CRWCLTGTPLQNNLEDL+SLLCF
Sbjct: 770 SSIFHRVEWYRVVLDEAHTIKSSKTLSAQAAFALPSHCRWCLTGTPLQNNLEDLYSLLCF 829

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW KLIQ+PYE GD RGLRLIKAILRPLMLRRTKDTKD  GRPILVLPPT
Sbjct: 830 LHVEPWCNWAWWYKLIQKPYECGDQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPT 889

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 298
           D+Q + CEQSEAEHDFYDALFKRSKV+FDQFV QG+VLHNYA+ILELLLRLRQCCNHPFL
Sbjct: 890 DIQVIECEQSEAEHDFYDALFKRSKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFL 949

[Close]

BLAST of MELO3C006447 vs. TrEMBL
Match: F6H8H8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g00150 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 9.8e-133
Identity = 237/302 (78.48%), Postives = 260/302 (86.09%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEK--KSQKSRTKA----RGGTLIVC 60
           MGLGKTVMTIALILAR G+      K        TE+  K+  S TKA    +GGTLIVC
Sbjct: 633 MGLGKTVMTIALILARPGRRSSGVHKLLTEAADDTEEAEKNTDSHTKAPLNVKGGTLIVC 692

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS+PESISIF+HYGGDRTN+P+V+S +DVVLTTYGVLTSAYK+D  
Sbjct: 693 PMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISEHDVVLTTYGVLTSAYKNDEN 752

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SI+HRV+WYRVVLDEAHTIKSSKT +AQAAF L S+CRWCLTGTPLQNNLEDL+SLLCF
Sbjct: 753 SSIFHRVEWYRVVLDEAHTIKSSKTLSAQAAFALPSHCRWCLTGTPLQNNLEDLYSLLCF 812

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW KLIQ+PYE GD RGLRLIKAILRPLMLRRTKDTKD  GRPILVLPPT
Sbjct: 813 LHVEPWCNWAWWYKLIQKPYECGDQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPT 872

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 297
           D+Q + CEQSEAEHDFYDALFKRSKV+FDQFV QG+VLHNYA+ILELLLRLRQCCNHPFL
Sbjct: 873 DIQVIECEQSEAEHDFYDALFKRSKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFL 932

[Close]

BLAST of MELO3C006447 vs. TrEMBL
Match: K4BDX0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.3e-132
Identity = 230/303 (75.91%), Postives = 261/303 (86.14%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSR-------TKARGGTLIV 60
           MGLGKTVMTI+LILA +G+G PD+Q+  +     TE  +++          KA+GGTLIV
Sbjct: 534 MGLGKTVMTISLILANLGRGSPDDQEIVLEDTDETECVTKRITYTDTEVSKKAKGGTLIV 593

Query: 61  CPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDG 120
           CPMALLGQWK+ELE HS+P S+S+FVHYGGDR+N+P V++  DVVLTTYGVL++ YK++ 
Sbjct: 594 CPMALLGQWKDELEAHSKPGSVSVFVHYGGDRSNDPRVIAEQDVVLTTYGVLSATYKANN 653

Query: 121 EFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLC 180
           E SI+H VDWYRVVLDEAHTIKS KT  AQAAFTL++YCRWCLTGTPLQNNLEDL+SLLC
Sbjct: 654 EKSIFHNVDWYRVVLDEAHTIKSWKTLGAQAAFTLSAYCRWCLTGTPLQNNLEDLYSLLC 713

Query: 181 FLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPP 240
           FL VEPWCNWAWWNKLIQRPYENGD R L+LIKAILRPLMLRRTKDTKD +GR ILVLPP
Sbjct: 714 FLHVEPWCNWAWWNKLIQRPYENGDQRALKLIKAILRPLMLRRTKDTKDKDGRAILVLPP 773

Query: 241 TDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPF 297
           TD+Q + C QSEAE DFYDALFKRSKVQFDQF+AQGKVLHNYANILELLLRLRQCCNHPF
Sbjct: 774 TDIQVIECTQSEAERDFYDALFKRSKVQFDQFLAQGKVLHNYANILELLLRLRQCCNHPF 833

[Close]

BLAST of MELO3C006447 vs. TrEMBL
Match: A0A0D2S976_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G248800 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.3e-132
Identity = 231/302 (76.49%), Postives = 259/302 (85.76%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNK---NVITEKKSQ---KSRTKARGGTLIVC 60
           MGLGKTVMTIALIL+R+G+G PDN+K    K   ++ T KK         +A+GGTLI+C
Sbjct: 521 MGLGKTVMTIALILSRLGRGNPDNEKPDSRKADGSITTNKKRDTYGSGPRRAKGGTLIIC 580

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS PE+ISIFVHYGGDRTN+P V+S +DVVLTTYGVLT+AYKSD E
Sbjct: 581 PMALLSQWKDELETHSRPETISIFVHYGGDRTNDPRVISEHDVVLTTYGVLTAAYKSDAE 640

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SIYHRVDWYRVVLDEAHTIKSSKT  A+A F L+++CRWCLTGTP+QNNLEDL+SLLCF
Sbjct: 641 NSIYHRVDWYRVVLDEAHTIKSSKTLGARACFALSAHCRWCLTGTPIQNNLEDLYSLLCF 700

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW   IQ PYENG+P GL+ IKAILR LMLRRTK+TKD  GRPILVLPPT
Sbjct: 701 LHVEPWCNWAWWKTKIQGPYENGNPTGLKWIKAILRLLMLRRTKETKDKEGRPILVLPPT 760

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 297
           D+Q + CEQSEAE DFYDALFKRSKVQFDQFVAQG+VLHNYA+ILELLLRLRQCCNHPFL
Sbjct: 761 DIQVIECEQSEAERDFYDALFKRSKVQFDQFVAQGRVLHNYASILELLLRLRQCCNHPFL 820

[Close]

BLAST of MELO3C006447 vs. TAIR10
Match: AT5G43530.1 (AT5G43530.1 Helicase protein with RING/U-box domain)

HSP 1 Score: 467.6 bits (1202), Expect = 5.7e-132
Identity = 223/302 (73.84%), Postives = 258/302 (85.43%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQK------SRTKARGGTLIVC 60
           MGLGKTVMTIALILAR G+G P+N+   V  +V  +K+++K      +  KA+GGTLI+C
Sbjct: 689 MGLGKTVMTIALILARPGRGNPENEDVLV-ADVNADKRNRKEIHMALTTVKAKGGTLIIC 748

Query: 61  PMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGE 120
           PMALL QWK+ELE HS+P+++S+ V+YGGDRT++ + ++ +DVVLTTYGVLTSAYK D  
Sbjct: 749 PMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSAYKQDMA 808

Query: 121 FSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCF 180
            SI+HR+DWYR+VLDEAHTIKS KTQ A+A F L+S+CRWCLTGTPLQN LEDL+SLLCF
Sbjct: 809 NSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCF 868

Query: 181 LRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPT 240
           L VEPWCNWAWW+KLIQ+PYENGDPRGL+LIKAILRPLMLRRTK+T+D  G  IL LPPT
Sbjct: 869 LHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPT 928

Query: 241 DVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 297
           DVQ + CEQSEAE DFY ALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL
Sbjct: 929 DVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL 988

[Close]

BLAST of MELO3C006447 vs. TAIR10
Match: AT5G22750.1 (AT5G22750.1 DNA/RNA helicase protein)

HSP 1 Score: 370.9 bits (951), Expect = 7.3e-103
Identity = 183/320 (57.19%), Postives = 230/320 (71.88%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKG------CPDNQKSTVNKNVITEKKS--------------- 60
           MGLGKTVMTI+L+LA   K       CP+ +   V  + + +  S               
Sbjct: 421 MGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRL 480

Query: 61  -QKSRTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVV 120
            ++      GG LIVCPM LLGQWK E+E+H++P S+S++VHYG  R  + ++LS  DVV
Sbjct: 481 LEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVV 540

Query: 121 LTTYGVLTSAYKSDG--EFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCL 180
           +TTYGVLTS +  +   +    + V W+R+VLDEAHTIK+SK+Q + AA  L +  RWCL
Sbjct: 541 ITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCL 600

Query: 181 TGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRR 240
           TGTP+QNNLEDL+SLL FLR+EPW  WAWWNKL+Q+P+E GD RGL+L+++IL+P+MLRR
Sbjct: 601 TGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRR 660

Query: 241 TKDTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYA 297
           TK + D  GRPILVLPP D + + CE SE+E DFYDALFKRSKV+FDQFV QGKVLHNYA
Sbjct: 661 TKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYA 720

[Close]

BLAST of MELO3C006447 vs. TAIR10
Match: AT5G05130.1 (AT5G05130.1 DNA/RNA helicase protein)

HSP 1 Score: 189.5 bits (480), Expect = 3.0e-48
Identity = 105/314 (33.44%), Postives = 167/314 (53.18%), Query Frame = 1


Query: 1   MGLGKTVMTIALIL----ARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGG------- 60
           MGLGKT+  ++LI            P  +      + I +K  ++ R K+          
Sbjct: 268 MGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLK 327

Query: 61  -------------TLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYD 120
                        TLIVCP +++  W  +LE H+ P  + +++++GG+RT++   L  YD
Sbjct: 328 TDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYD 387

Query: 121 VVLTTYGVLTSAYKSDGEFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCL 180
           +VLTTYG L  A +   E S   +++W R++LDEAHTIK++  Q ++    L +  RW +
Sbjct: 388 IVLTTYGTL--AVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAV 447

Query: 181 TGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRR 240
           TGTP+QN   DL+SL+ FLR EP+   ++W  LIQRP   G+ +GL  ++ ++  + LRR
Sbjct: 448 TGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRR 507

Query: 241 TKDTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYA 291
           TK+      + ++ LPP  V+T   E S  E   YD +   +K      +  G ++ NY+
Sbjct: 508 TKE------KSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYS 567

[Close]

BLAST of MELO3C006447 vs. TAIR10
Match: AT3G16600.1 (AT3G16600.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 171.8 bits (434), Expect = 6.5e-43
Identity = 112/317 (35.33%), Postives = 159/317 (50.16%), Query Frame = 1


Query: 2   GLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLGQ 61
           GLGKT+ TI+LIL +  K               ++ K +K + +  GGTLIVCP +++ Q
Sbjct: 84  GLGKTISTISLILLQKLK---------------SQSKQRKRKGQNSGGTLIVCPASVVKQ 143

Query: 62  WKEEL-EIHSEPESISIFVHYGGDRTNNPEVLSGYDVV----------------LTTYGV 121
           W  E+ E  S+   +S+ VH+G  RT +P  ++ YDVV                L  Y  
Sbjct: 144 WAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQNPMLNRYDS 203

Query: 122 LTSAYKSDGEFSIYH------RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTG 181
           +      DG   I        RV W RVVLDEAHTIK+ +T  A+A F+L +  RWCLTG
Sbjct: 204 MRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTG 263

Query: 182 TPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTK 241
           TP++N ++DL+S   FLR  P+     +++ I+ P +     G + ++AILR +MLRRTK
Sbjct: 264 TPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKPLHGYKKLQAILRGIMLRRTK 323

Query: 242 DTKDANGRPILVLPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANI 296
                                       E  FY  L   S+ +F+++ A G +  + A +
Sbjct: 324 ----------------------------EWSFYRKLELNSRWKFEEYAADGTLHEHMAYL 357

[Close]

BLAST of MELO3C006447 vs. TAIR10
Match: AT1G61140.1 (AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-38
Identity = 76/176 (43.18%), Postives = 113/176 (64.20%), Query Frame = 1


Query: 120 RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEP 179
           +V W+RVVLDEA +IK+ KTQ A+A + L +  RWCL+GTP+QN+++DL+S   FL+ +P
Sbjct: 784 KVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDP 843

Query: 180 WCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTV 239
           + ++  +   I+ P      +G + ++AIL+ +MLRRTK +   +G+PI+ LPP  ++  
Sbjct: 844 YSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSL-LDGKPIISLPPKSIELR 903

Query: 240 TCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLV 296
             + +  E DFY  L   S+ QF ++   G V  NY NIL +LLRLRQ C+HP LV
Sbjct: 904 KVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV 958

HSP 2 Score: 65.5 bits (158), Expect = 6.5e-11
Identity = 42/138 (30.43%), Postives = 64/138 (46.38%), Query Frame = 1


Query: 2   GLGKTVMTIALILARMGK---GCPDNQKSTV----------------------------- 61
           GLGKTV TIALIL    K    C ++ K  +                             
Sbjct: 587 GLGKTVSTIALILKERSKPAQACEESTKKEIFDLESETGECAPLKPSGRSKHFEHSQLLS 646

Query: 62  NKNVITEKKSQKSRTKARGGTLIVCPMALLGQWKEELEIHSEPES-ISIFVHYGGDRTNN 107
           N+N +      K   +   GTL+VCP +++ QW +EL      E+ +S+ V++G  RT +
Sbjct: 647 NENKVGGDSVGKVTGRPAAGTLVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKD 706

[Close]

BLAST of MELO3C006447 vs. NCBI nr
Match: gi|659076202|ref|XP_008438555.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Cucumis melo])

HSP 1 Score: 613.2 bits (1580), Expect = 2.4e-172
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 60
           MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG
Sbjct: 531 MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 590

Query: 61  QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR 120
           QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR
Sbjct: 591 QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR 650

Query: 121 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 180
           VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW
Sbjct: 651 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 710

Query: 181 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT 240
           CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT
Sbjct: 711 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT 770

Query: 241 CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
           CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 771 CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 826

[Close]

BLAST of MELO3C006447 vs. NCBI nr
Match: gi|449433265|ref|XP_004134418.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Cucumis sativus])

HSP 1 Score: 598.6 bits (1542), Expect = 6.1e-168
Identity = 288/296 (97.30%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALLG 60
           MGLGKTVMTIALILARMGKGCPDNQKSTVNK V TEKKSQKS TKARGGTLIVCPMALLG
Sbjct: 528 MGLGKTVMTIALILARMGKGCPDNQKSTVNKKVTTEKKSQKSTTKARGGTLIVCPMALLG 587

Query: 61  QWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYHR 120
           QWKEELEIHSEPESISIFVHYGGDRTNNPEVL GYDVVLTTYGVLTSAYKSDGEFSIYHR
Sbjct: 588 QWKEELEIHSEPESISIFVHYGGDRTNNPEVLLGYDVVLTTYGVLTSAYKSDGEFSIYHR 647

Query: 121 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 180
           VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW
Sbjct: 648 VDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEPW 707

Query: 181 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTVT 240
           CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDT DANGRPILVLPPTD+QTV 
Sbjct: 708 CNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTNDANGRPILVLPPTDIQTVM 767

Query: 241 CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
           CEQSEAEHDFYDALFK+SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 768 CEQSEAEHDFYDALFKKSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 823

[Close]

BLAST of MELO3C006447 vs. NCBI nr
Match: gi|747087285|ref|XP_011091178.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Sesamum indicum])

HSP 1 Score: 488.8 bits (1257), Expect = 6.8e-135
Identity = 238/306 (77.78%), Postives = 267/306 (87.25%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPDNQKSTVNKNVITEKKSQ----------KSRTKARGGT 60
           MGLGKTVMTIALILAR G+G      + V++ VITE +++          ++  KA GGT
Sbjct: 578 MGLGKTVMTIALILARRGRG------TRVDQQVITEGETKIEHIKISQTTEASKKANGGT 637

Query: 61  LIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYK 120
           LIVCPMALLGQWK+ELE HS+P+SIS+FVHYGG+R N+P+V++  DVVLTTYGVLTSAYK
Sbjct: 638 LIVCPMALLGQWKDELETHSKPDSISVFVHYGGERANDPKVIAEPDVVLTTYGVLTSAYK 697

Query: 121 SDGEFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFS 180
           +D   SI+H+V+WYRVVLDEAHTIKSSKTQ AQAAF L+SYCRWCLTGTPLQNNLEDL+S
Sbjct: 698 NDSINSIFHQVEWYRVVLDEAHTIKSSKTQGAQAAFGLSSYCRWCLTGTPLQNNLEDLYS 757

Query: 181 LLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILV 240
           LLCFL VEPWCNWAWWNKLIQRPYENGD RGL+L+KAILRPLMLRRTK++KD  GRPILV
Sbjct: 758 LLCFLHVEPWCNWAWWNKLIQRPYENGDKRGLKLVKAILRPLMLRRTKESKDKEGRPILV 817

Query: 241 LPPTDVQTVTCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCN 297
           LPPTD+Q V CEQSEAEHDFY ALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCN
Sbjct: 818 LPPTDIQVVECEQSEAEHDFYGALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCN 877

[Close]

BLAST of MELO3C006447 vs. NCBI nr
Match: gi|604327026|gb|EYU32975.1| (hypothetical protein MIMGU_mgv1a024873mg, partial [Erythranthe guttata])

HSP 1 Score: 483.4 bits (1243), Expect = 2.8e-133
Identity = 230/297 (77.44%), Postives = 262/297 (88.22%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPD-NQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALL 60
           MGLGKTVMTIALILA  G+G  D +++  +N +   E +   + +K +GGTLI+CPMALL
Sbjct: 663 MGLGKTVMTIALILANRGRGGQDVDEQVIINGSDNIENRRLTNESKPKGGTLIICPMALL 722

Query: 61  GQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYH 120
            QWK+ELE HS+ +SIS+FVHYGGDRTN+P +++  DVVLTTYGVLTSAYK+D   SI++
Sbjct: 723 SQWKDELETHSKKDSISVFVHYGGDRTNDPSMIAEPDVVLTTYGVLTSAYKTDSTNSIFN 782

Query: 121 RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEP 180
           RV+W+RVVLDEAHTIKSSKTQ AQAAF L+SYCRWCLTGTPLQNNLEDL+SLLCFL VEP
Sbjct: 783 RVEWHRVVLDEAHTIKSSKTQGAQAAFALSSYCRWCLTGTPLQNNLEDLYSLLCFLHVEP 842

Query: 181 WCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTV 240
           WCNWAWWNKLIQRPYENGD RGL+L+KAILRPLMLRRTK++KD  GR ILVLPPTD+Q +
Sbjct: 843 WCNWAWWNKLIQRPYENGDQRGLKLVKAILRPLMLRRTKESKDKEGRAILVLPPTDIQVI 902

Query: 241 TCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
            CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 903 ECEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 959

[Close]

BLAST of MELO3C006447 vs. NCBI nr
Match: gi|848884816|ref|XP_012842667.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Erythranthe guttata])

HSP 1 Score: 483.4 bits (1243), Expect = 2.8e-133
Identity = 230/297 (77.44%), Postives = 262/297 (88.22%), Query Frame = 1


Query: 1   MGLGKTVMTIALILARMGKGCPD-NQKSTVNKNVITEKKSQKSRTKARGGTLIVCPMALL 60
           MGLGKTVMTIALILA  G+G  D +++  +N +   E +   + +K +GGTLI+CPMALL
Sbjct: 681 MGLGKTVMTIALILANRGRGGQDVDEQVIINGSDNIENRRLTNESKPKGGTLIICPMALL 740

Query: 61  GQWKEELEIHSEPESISIFVHYGGDRTNNPEVLSGYDVVLTTYGVLTSAYKSDGEFSIYH 120
            QWK+ELE HS+ +SIS+FVHYGGDRTN+P +++  DVVLTTYGVLTSAYK+D   SI++
Sbjct: 741 SQWKDELETHSKKDSISVFVHYGGDRTNDPSMIAEPDVVLTTYGVLTSAYKTDSTNSIFN 800

Query: 121 RVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRWCLTGTPLQNNLEDLFSLLCFLRVEP 180
           RV+W+RVVLDEAHTIKSSKTQ AQAAF L+SYCRWCLTGTPLQNNLEDL+SLLCFL VEP
Sbjct: 801 RVEWHRVVLDEAHTIKSSKTQGAQAAFALSSYCRWCLTGTPLQNNLEDLYSLLCFLHVEP 860

Query: 181 WCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTKDANGRPILVLPPTDVQTV 240
           WCNWAWWNKLIQRPYENGD RGL+L+KAILRPLMLRRTK++KD  GR ILVLPPTD+Q +
Sbjct: 861 WCNWAWWNKLIQRPYENGDQRGLKLVKAILRPLMLRRTKESKDKEGRAILVLPPTDIQVI 920

Query: 241 TCEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 297
            CEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM
Sbjct: 921 ECEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 977

The following BLAST results are available for this feature:

BLAST of MELO3C006447 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SM3L3_ARATH	1.0e-130	73.84	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati...	[more]
SM3L2_ARATH	1.3e-101	57.19	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati...	[more]
RAD5_GIBZE	6.3e-56	38.22	DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9...	[more]
RAD5_ASPFU	8.5e-53	37.25	DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / ...	[more]
HLTF_HUMAN	4.2e-52	37.16	Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2	[more]

BLAST of MELO3C006447 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9Y2_CUCSA	4.2e-168	97.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141820 PE=4 SV=1	[more]
A5AF76_VITVI	2.6e-133	78.55	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033485 PE=4 SV=1	[more]
F6H8H8_VITVI	9.8e-133	78.48	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g00150 PE=4 SV=...	[more]
K4BDX0_SOLLC	1.3e-132	75.91	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0D2S976_GOSRA	1.3e-132	76.49	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G248800 PE=4 SV=1	[more]

BLAST of MELO3C006447 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43530.1	5.7e-132	73.84	Helicase protein with RING/U-box domain	[more]
AT5G22750.1	7.3e-103	57.19	DNA/RNA helicase protein	[more]
AT5G05130.1	3.0e-48	33.44	DNA/RNA helicase protein	[more]
AT3G16600.1	6.5e-43	35.33	SNF2 domain-containing protein / helicase domain-containing protein ...	[more]
AT1G61140.1	3.7e-38	43.18	SNF2 domain-containing protein / helicase domain-containing protein ...	[more]

BLAST of MELO3C006447 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076202\|ref\|XP_008438555.1\|	2.4e-172	100.00	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ...	[more]
gi\|449433265\|ref\|XP_004134418.1\|	6.1e-168	97.30	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ...	[more]
gi\|747087285\|ref\|XP_011091178.1\|	6.8e-135	77.78	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ...	[more]
gi\|604327026\|gb\|EYU32975.1\|	2.8e-133	77.44	hypothetical protein MIMGU_mgv1a024873mg, partial [Erythranthe guttata]	[more]
gi\|848884816\|ref\|XP_012842667.1\|	2.8e-133	77.44	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000330	SNF2_N
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006447T1	MELO3C006447T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000330	SNF2-related, N-terminal domain	PFAM	PF00176	SNF2_N	coord: 1..295 score: 4.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 1..195 score: 5.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 1..178 score: 18
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 1..175 score: 1.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..216 score: 1.01E-42coord: 228..295 score: 4.1
None	No IPR available	PANTHER	PTHR10799	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED	coord: 1..295 score: 1.6E
None	No IPR available	PANTHER	PTHR10799:SF779	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED	coord: 1..295 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006447	Cucurbita maxima (Rimu)	cmameB002
MELO3C006447	Cucurbita maxima (Rimu)	cmameB242
MELO3C006447	Cucurbita maxima (Rimu)	cmameB482
MELO3C006447	Cucurbita maxima (Rimu)	cmameB763
MELO3C006447	Cucurbita maxima (Rimu)	cmameB850
MELO3C006447	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006447	Cucurbita moschata (Rifu)	cmomeB474
MELO3C006447	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006447	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006447	Wild cucumber (PI 183967)	cpimeB144
MELO3C006447	Wild cucumber (PI 183967)	cpimeB230
MELO3C006447	Cucumber (Chinese Long) v2	cumeB145
MELO3C006447	Cucumber (Chinese Long) v2	cumeB236
MELO3C006447	Watermelon (Charleston Gray)	mewcgB427
MELO3C006447	Watermelon (Charleston Gray)	mewcgB441
MELO3C006447	Watermelon (Charleston Gray)	mewcgB445
MELO3C006447	Watermelon (97103) v1	mewmB486
MELO3C006447	Watermelon (97103) v1	mewmB459
MELO3C006447	Watermelon (97103) v1	mewmB461
MELO3C006447	Cucurbita pepo (Zucchini)	cpemeB316
MELO3C006447	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006447	Cucurbita pepo (Zucchini)	cpemeB702
MELO3C006447	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006447	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006447	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C006447	Bottle gourd (USVL1VR-Ls)	lsimeB382
MELO3C006447	Cucumber (Gy14) v2	cgybmeB126
MELO3C006447	Cucumber (Gy14) v2	cgybmeB200
MELO3C006447	Silver-seed gourd	carmeB0236
MELO3C006447	Silver-seed gourd	carmeB0240
MELO3C006447	Silver-seed gourd	carmeB0749
MELO3C006447	Silver-seed gourd	carmeB0941
MELO3C006447	Silver-seed gourd	carmeB1050
MELO3C006447	Cucumber (Chinese Long) v3	cucmeB147
MELO3C006447	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006447	Watermelon (97103) v2	mewmbB434
MELO3C006447	Watermelon (97103) v2	mewmbB448
MELO3C006447	Watermelon (97103) v2	mewmbB451
MELO3C006447	Wax gourd	mewgoB514
MELO3C006447	Wax gourd	mewgoB552
MELO3C006447	Wax gourd	mewgoB556
MELO3C006447	Melon (DHL92) v3.5.1	memeB147
MELO3C006447	Cucumber (Gy14) v1	cgymeB439
MELO3C006447	Cucumber (Gy14) v1	cgymeB625