MELO3C006280T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006280T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	60S ribosomal protein L37a-2
Location	chr6 : 2227661 .. 2229718 (+)
Sequence length	717

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCGCTTAGCCGTTCGGTCTCTGCATCAGCGTCTGTCCAGAGGTGCCCTTGTTCCGTCAAAGCCTCAACAATGGTACTCAGCCTCTCTCTCCCGTCTTTGCTGTTCATCTTTACTTCAATTTGTTTTTCTTTTCTCCTTCAAGTTTTGAAGGCGAGGCAAGTTGTCTGTAGTTTGCAGGATTTAATTTCTGGGCGATTAATGAACTGAAATTGGGAACACGAACCTCATTCTTCTGTCGTTATTGGCTGCGTGGTAGTGGATTATCGATTGTATTCCATGGGTATTTCGTGTTCTAGCTGAATTAGATGTAGAAATGTGGTTTCAGCAATTCACGTTCTCCATGTTTCATTAATTTTCCGAACTTCAACATTGTTTTAGATTCAGCAATCATCGTGGGAAAGATAGATTAGAATCTGGAAAATCATTTTGAGCTAGGGTTTACGTTCTATCTTTACTTTATTATACTTACTATGTGAAGACTGTTAGATTTATCTGACGTGTTTTTGTTGCGATTTCTTGTTTGATCGCAGACGAAAAGAACCAAGAAGGCTGGCATTGTCGGCAAATACGGTATGTACTAGCGTGTTATGTTTTTTTGAATTTTTTTAAATATTTAACCTACAGTGAAATAGTATTAGAGCAATGAGTGGAAGTGGGACTTGTGCAAGGGTTTCTTAATTAGTTTGACTCTCAAAGATAATTTGTTGAAGTAGTTGGTAGATTTTTAATTCCCCTATACTTCAACGTGCTTGTATGCGCACGTTATGCTGTGCATTTATGTTTGTAAATGGTTTATTGTGTATTTTGTAACAGGTACCAGATATGGTGCTAGTCTGAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTCTGCGGAAAGGTTAGTTTCTTTATTCAACATATAGTTTGTTGTATTTGGTGATTACAAGTAGTTCGTCAGTGAATGAAGAAATTATTTGGTTTTGGTGGTTACAAGTAGATCCTTGAATGGATGTTGAACAACGTGTGATACAACTTATTGATTTTTTATGAAGGCCCTATCAGGATTGGCATTTTAAGTACATGAAAAAAGTCATTCAAGCAGGCAAAAAACATCTACATGTTGATATAGTTTTTATTCCATGATTCTAATTTCTAAAAAAATGATTGCTGCTTCAATCTCTTAAAAGATGCCGTTGTGAACGATGCATTTTGGTATGTATCTTTTAAGGAATATATAATTATTGGATTAAAAAGTATATTTTTCCCTTGGTAGAAAAGGACAATATTTTGTTAGTATTTTTTTGAATCATATTTATGATGTTCTTGTCCATAATTCTTGCAACTATTCTTAGGCTAAGATCAAGTGCAATGAAAACGTCTAGTTGTAAATGTTACTTTTATTCTTGAATCTAATCAATGATTGCTGCTCCGAACCTCTTACAGTATGCAGTGAAAAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGCGGAAAGGTGAAAGCCGGAGGTGCCTACACATTGAAGTGAGTACAGTTGATCTTTTTTTTCAAAGAAGTATTTGTGGTTTAAAATTCTTTTCAAGATTTTGACTGCTGTTTCTTTCTTTTGTTTTGGGCAGCACTGCTAGTGCGGTAACTGTTAGAAGCACAATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAAGTTAGATTTATATTTTGTTTTCCTTCCGTCTTGTGTTATACTACCGGTTTGATAGTTTAGAGATATTGGAAGAAGATTGTTCTAAGCAATTTGTGTACCCATTTGACTTTATTCCTAAGTTCTCACTCTGGAGCTTCTAACCTAGCTCTTCTTTGTGTTTTTATCCATTTGAAATATCCTGGATTTTTGGGACACATCTCTACTTTTTGCTCAGTTGGCAAAATTGTCTTGCTTTCAATTTTTATCAGATATCGAAATTTGGCTTGCTTTTTTTTTTTTTAAATATGTATTTTCATCTCTTGGGAGACTTTTCTAGTAACAAAGGAGTACTATAATACATTATGTTTACGATAAAAATCCGCTATTC

mRNA sequence

TCCCGCTTAGCCGTTCGGTCTCTGCATCAGCGTCTGTCCAGAGGTGCCCTTGTTCCGTCAAAGCCTCAACAATGACGAAAAGAACCAAGAAGGCTGGCATTGTCGGCAAATACGGTACCAGATATGGTGCTAGTCTGAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTCTGCGGAAAGTATGCAGTGAAAAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGCGGAAAGGTGAAAGCCGGAGGTGCCTACACATTGAACACTGCTAGTGCGGTAACTGTTAGAAGCACAATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAAGTTAGATTTATATTTTGTTTTCCTTCCGTCTTGTGTTATACTACCGGTTTGATAGTTTAGAGATATTGGAAGAAGATTGTTCTAAGCAATTTGTGTACCCATTTGACTTTATTCCTAAGTTCTCACTCTGGAGCTTCTAACCTAGCTCTTCTTTGTGTTTTTATCCATTTGAAATATCCTGGATTTTTGGGACACATCTCTACTTTTTGCTCAGTTGGCAAAATTGTCTTGCTTTCAATTTTTATCAGATATCGAAATTTGGCTTGCTTTTTTTTTTTTTAAATATGTATTTTCATCTCTTGGGAGACTTTTCTAGTAACAAAGGAGTACTATAATACATTATGTTTACGATAAAAATCCGCTATTC

Coding sequence (CDS)

ATGACGAAAAGAACCAAGAAGGCTGGCATTGTCGGCAAATACGGTACCAGATATGGTGCTAGTCTGAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTCTGCGGAAAGTATGCAGTGAAAAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGCGGAAAGGTGAAAGCCGGAGGTGCCTACACATTGAACACTGCTAGTGCGGTAACTGTTAGAAGCACAATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAA

Protein sequence

MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES*

Homology

[Close]

BLAST of MELO3C006280T1 vs. Swiss-Prot
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-46
Identity = 91/92 (98.91%), Postives = 89/92 (96.74%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK C
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKAC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MELO3C006280T1 vs. Swiss-Prot
Match: RL372_ORYSJ (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-46
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of MELO3C006280T1 vs. Swiss-Prot
Match: RL371_ORYSJ (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-46
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of MELO3C006280T1 vs. Swiss-Prot
Match: RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-45
Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 92
          GKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]

BLAST of MELO3C006280T1 vs. Swiss-Prot
Match: R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.6e-45
Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDC
Sbjct: 1  MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MELO3C006280T1 vs. TrEMBL
Match: M5WNW1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013350mg PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 37  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 96

Query: 61  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
           GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 97  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 128

[Close]

BLAST of MELO3C006280T1 vs. TrEMBL
Match: A0A067JYD1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14663 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MELO3C006280T1 vs. TrEMBL
Match: A0A0V0GYQ6_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 15  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 74

Query: 61  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
           GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 75  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 106

[Close]

BLAST of MELO3C006280T1 vs. TrEMBL
Match: A0A118JX09_CYNCS (Ribosomal protein L37ae OS=Cynara cardunculus var. scolymus GN=Ccrd_002690 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MELO3C006280T1 vs. TrEMBL
Match: K4CND1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MELO3C006280T1 vs. TAIR10
Match: AT3G10950.1 (AT3G10950.1 Zinc-binding ribosomal protein family protein)

HSP 1 Score: 182.2 bits (461), Expect = 1.5e-46
Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDC
Sbjct: 1  MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MELO3C006280T1 vs. TAIR10
Match: AT3G60245.1 (AT3G60245.1 Zinc-binding ribosomal protein family protein)

HSP 1 Score: 179.5 bits (454), Expect = 9.6e-46
Identity = 85/91 (93.41%), Postives = 85/91 (93.41%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDC
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 92
          GKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91

[Close]

BLAST of MELO3C006280T1 vs. NCBI nr
Match: gi|641866750|gb|KDO85434.1| (hypothetical protein CISIN_1g045338mg [Citrus sinensis])

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 43  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 102

Query: 61  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
           GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 103 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 134

[Close]

BLAST of MELO3C006280T1 vs. NCBI nr
Match: gi|595849622|ref|XP_007209764.1| (hypothetical protein PRUPE_ppa013350mg [Prunus persica])

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 37  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 96

Query: 61  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
           GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 97  GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 128

[Close]

BLAST of MELO3C006280T1 vs. NCBI nr
Match: gi|225427377|ref|XP_002282974.1| (PREDICTED: 60S ribosomal protein L37a [Vitis vinifera])

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MELO3C006280T1 vs. NCBI nr
Match: gi|565482480|ref|XP_006298880.1| (hypothetical protein CARUB_v10015000mg [Capsella rubella])

HSP 1 Score: 189.1 bits (479), Expect = 3.4e-45
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MELO3C006280T1 vs. NCBI nr
Match: gi|702335612|ref|XP_010055398.1| (PREDICTED: 60S ribosomal protein L37a [Eucalyptus grandis])

HSP 1 Score: 189.1 bits (479), Expect = 3.4e-45
Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVG+WGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGVWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 93
          GK+KAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61 GKIKAGGAYTLNTASAVTVRSTIRRLREQTES 92

The following BLAST results are available for this feature:

BLAST of MELO3C006280T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL37A_GOSHI	1.1e-46	98.91	60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1	[more]
RL372_ORYSJ	1.4e-46	96.74	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica GN=Os05g0557000 PE=...	[more]
RL371_ORYSJ	1.4e-46	96.74	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=...	[more]
RL37A_PSEMZ	1.2e-45	96.70	60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1	[more]
R37A1_ARATH	2.6e-45	94.57	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=3 SV...	[more]

BLAST of MELO3C006280T1 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WNW1_PRUPE	1.4e-45	100.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013350mg PE=3 SV=1	[more]
A0A067JYD1_JATCU	1.4e-45	100.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14663 PE=3 SV=1	[more]
A0A0V0GYQ6_SOLCH	1.4e-45	100.00	Putative ovule protein (Fragment) OS=Solanum chacoense PE=3 SV=1	[more]
A0A118JX09_CYNCS	1.4e-45	100.00	Ribosomal protein L37ae OS=Cynara cardunculus var. scolymus GN=Ccrd_002690 PE=3 ...	[more]
K4CND1_SOLLC	1.4e-45	100.00	Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1	[more]

BLAST of MELO3C006280T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10950.1	1.5e-46	94.57	Zinc-binding ribosomal protein family protein	[more]
AT3G60245.1	9.6e-46	93.41	Zinc-binding ribosomal protein family protein	[more]

BLAST of MELO3C006280T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|641866750\|gb\|KDO85434.1\|	2.0e-45	100.00	hypothetical protein CISIN_1g045338mg [Citrus sinensis]	[more]
gi\|595849622\|ref\|XP_007209764.1\|	2.0e-45	100.00	hypothetical protein PRUPE_ppa013350mg [Prunus persica]	[more]
gi\|225427377\|ref\|XP_002282974.1\|	2.0e-45	100.00	PREDICTED: 60S ribosomal protein L37a [Vitis vinifera]	[more]
gi\|565482480\|ref\|XP_006298880.1\|	3.4e-45	98.91	hypothetical protein CARUB_v10015000mg [Capsella rubella]	[more]
gi\|702335612\|ref\|XP_010055398.1\|	3.4e-45	97.83	PREDICTED: 60S ribosomal protein L37a [Eucalyptus grandis]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006280	MELO3C006280	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006280T1	MELO3C006280T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006280T1.cds1	MELO3C006280T1.cds1	CDS
MELO3C006280T1.cds2	MELO3C006280T1.cds2	CDS
MELO3C006280T1.cds3	MELO3C006280T1.cds3	CDS
MELO3C006280T1.cds4	MELO3C006280T1.cds4	CDS
MELO3C006280T1.cds5	MELO3C006280T1.cds5	CDS