MELO3C003272T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C003272T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description50S ribosomal protein L10
Locationchr8 : 31959554 .. 31959838 (+)
Sequence length285
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAACTGTGTGGGAGTTCACATCTGAGTCCGCTGGAGCGTAGACTCGCCAGAAGAAAGGGAGAAGAAGCTACACACGCCACCATTCAAGGCAAACGCCGGAATTCGCCGGAAATTGAAGTTGCCGACGCTCGTGGGTGCGATGCCGTCGTAACGCCGTCGAAGAAGAAAGGAACCTCCTTCGTGCGTGGGTTACGCCGGCGATGGTTGAGCAGCACCATCCAGTTCATTGAAGAACTCGCACCGCTGCCGAAACTGTTCCGCTTGGGTGTCGAATCGTAA

mRNA sequence

ATGTTGAAACTGTGTGGGAGTTCACATCTGAGTCCGCTGGAGCGTAGACTCGCCAGAAGAAAGGGAGAAGAAGCTACACACGCCACCATTCAAGGCAAACGCCGGAATTCGCCGGAAATTGAAGTTGCCGACGCTCGTGGGTGCGATGCCGTCGTAACGCCGTCGAAGAAGAAAGGAACCTCCTTCGTGCGTGGGTTACGCCGGCGATGGTTGAGCAGCACCATCCAGTTCATTGAAGAACTCGCACCGCTGCCGAAACTGTTCCGCTTGGGTGTCGAATCGTAA

Coding sequence (CDS)

ATGTTGAAACTGTGTGGGAGTTCACATCTGAGTCCGCTGGAGCGTAGACTCGCCAGAAGAAAGGGAGAAGAAGCTACACACGCCACCATTCAAGGCAAACGCCGGAATTCGCCGGAAATTGAAGTTGCCGACGCTCGTGGGTGCGATGCCGTCGTAACGCCGTCGAAGAAGAAAGGAACCTCCTTCGTGCGTGGGTTACGCCGGCGATGGTTGAGCAGCACCATCCAGTTCATTGAAGAACTCGCACCGCTGCCGAAACTGTTCCGCTTGGGTGTCGAATCGTAA

Protein sequence

MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGTSFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES*
Homology
[Close]
BLAST of MELO3C003272T1 vs. TrEMBL
Match: A0A0A0KYI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G439070 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.2e-13
Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 1 

Query: 1  MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT 60
          MLK CGSSHLSPLERRLARR+ EEAT ATIQGKR NSPEIEV DAR C       ++   
Sbjct: 1  MLKPCGSSHLSPLERRLARREEEEATQATIQGKRWNSPEIEVTDARECGYCRNAVEEDTN 60

Query: 61 SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES 95
           F     R W+  T   +E+  P+ +  R   E+
Sbjct: 61 LF-----RAWV--TRAMVEQRHPVHRRARTAAET 87

[Close]
BLAST of MELO3C003272T1 vs. NCBI nr
Match: gi|700199582|gb|KGN54740.1| (hypothetical protein Csa_4G439070 [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 6.0e-13
Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 1 

Query: 1  MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT 60
          MLK CGSSHLSPLERRLARR+ EEAT ATIQGKR NSPEIEV DAR C       ++   
Sbjct: 1  MLKPCGSSHLSPLERRLARREEEEATQATIQGKRWNSPEIEVTDARECGYCRNAVEEDTN 60

Query: 61 SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES 95
           F     R W+  T   +E+  P+ +  R   E+
Sbjct: 61 LF-----RAWV--TRAMVEQRHPVHRRARTAAET 87

The following BLAST results are available for this feature:
BLAST of MELO3C003272T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYI6_CUCSA4.2e-1352.13Uncharacterized protein OS=Cucumis sativus GN=Csa_4G439070 PE=4 SV=1[more]
BLAST of MELO3C003272T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199582|gb|KGN54740.1|6.0e-1352.13hypothetical protein Csa_4G439070 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C003272MELO3C003272gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C003272T1MELO3C003272T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003272T1.cds1MELO3C003272T1.cds1CDS