Lsi11G012450.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAACAGAGACTCATTCCTCTGTTTTTTCTTCTTCTTCCTCACAACAATGCACGCCAAGTCGTACTCGGAGGTCACGAGCGTGGACCAATCCTCGCCGGCGCGATCGCCGCGCCGGCCGCTTTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCCTACGGCTCGAGCCCCATGGGTTCACCGCCGCACCATTTTTACCACGCTTCTCCAATCCACCATTCTCGCGAGTCATCCACTTCCAGATTCTCTGCTTCGCTTAAGAACAACCCAAATCGGAATGGGAATCTCTCGGCTTGGAGAAAACTCCACCGTCCCCAGGATTCCGATGATGACGAGGAAGACGACGAGGACGAGGAAAACGATGATCGGGATTCGAAATGGAATCGGAAGTTTCGGTTGTACTTGATTTTGTTTCTGTTGTTTGTTCTTCTTTTCACTGTCTTTTCCGTCATCCTCTGGGGCGCTAGCAAGTCCTTCCACCCTCAAATCCTAATTCAGGTAATTAATTATCATTATTTTTTGTTTGAGGTTTCATTCTGAGTTTATGGGTATTCCGCTATTTGTTATTTGAAAATTTTCTTGATTTATCACTATAAAATTTGTTTTGACAAGAAGGGATAAGTTAATTTGAATTTTTAATTAATTATTTTGAAGAGTTTAGAGAGAATGAATTAAAGTCCTGAGACAATTAAGCTAAGATAAACTTGATTTTCAGCCCTCGAACGTTCGTAGAGCTACAATGCTTTAGCGAGATTAATTGAAGTGTGCATAAGTTGACTCAAATACTCGTAGATATTTTAAGAACATTAAGTTTGCTTTTTCTTTTATATCGTTTGAGTTTGAAGAATATCCCAAATAAAGATCGAACATTCTATCTTAAGTGATATGTGAGCATGTACGAGACTTAGTTAAGATGGTAACTTCATGCTGATTATTAATTTTTTTTTTAATATGAACATAGCTCAATGATAATGGTAATTTATGTTAATTTGATTGTATTTTTAGATTTAAGGTTTAAACCTATCTTTTTTAAAAAAAGATTTTCTCCATTTTTTTTTTTTTTTGGTATTTAATTGATTAAGATTATGTTCTTGGCCAAGGAGAGACAAGATGTTAAAATCTCTCCATCCTTGTTGAACTAAAAATAAAGTTGATTACTTTTTAAAGTTTAGATATTAAATATACTCTTGTTGATGAAACTCTTAACTCAATTAGTTAAAATATTTATTTTTATTTTTTTAATTTATATATTTAGTATGTCTACTTGTGTGTATTTTTTTTTTTTTTTAATAAAAGAGACTTATTTTAGTCGTAATTTGACATCATCTCAAATGTAAAACATGAAAATAAAAATTAGACCTAACTCAATTGGAGATTCAAATGTAAACGGATTAGTTAATTAATATTTGCAACTTTATTACATGAAATATATATATATATATATATATATATAATGATTACATGAAAAGGCGGAAATTATTATTAATAAATTTAAAAAACCGAAAAGAAGAAGCATGTTTTAAGATTGAAAAAACAAAACAAAATAATTTTTTGTTTTTTGGAAAATGTACAGAGTATGGTATTCGAGAAGTTTAACGTACAAGCAGGGAGTGATCCGGGTGGTGTGGCAACAGATCTGATGTCATTAAATTCAACGGTCAGGATTACGTACAGAAATCCTGCCACGTTTTTCGGTGTCCACGTCAGCTCCACTCCATTTCAGCTTCAGTATTTCCAGCTCCAAGTAGCCTCTGGCCAGGTGCTCTTCAATAACTCCACTCTAATCTCATTCTTAATTACGCCTCTTTAATTAATTTTTAATTACTTTAAAATGGCCTATTTATTAAAAATAGAGGAAGAAAACTTATAATTTAATGTTTAATTAAATTAATTGAAAATTTGAAAGTTAGGCATGGCAGGCACGTTGTAAGGTCGAATTAGATTAATAAGCCATTGATTTGTTTTTATTTAGGTGTTTTTTTTAGGGGCTTAGATTTTGAATAATTACAAAAGGGTTCCAATAAGAAATTGGAAATATATAATATAAAATATATTAAATATTATTTTTGGGTGAGACTTTTCAGACATTGGGAGTTGGGAAGGATTACCACTCGCAATCAAGTGTCTGAAACTCTGAACACTTGTAAGTCTTTTTCCATACGGCCCTTTTTTGTAATTTTCCCGTTGGACATAAAGCCCCATTTTCTTTTTTTTTTTTTTTTCAAATCCAAACTTTGATTTTTCTTTTGAAAGTTTTTTTGTTGAGAAACTTTCTTTTGACATTTTTACCATAGTATACAATAATAATTTTTTTTTATTTTTTGGTAATCCGTACAAATTTAGTTGGTGGCCCCAAATTTTTGGAAATTTTGGACATTGAAGTTTATATTAAAGCGTGTTTAGGGTTGTTTTTGTCGGGTAAAAAACAATTGAAGGAAAATTCTTTGATAAAACTAATTTTTATTCATTTATTTAAAATCAGCACGACAAATTTCGATTATCGAGTTTTTTTTGAAAATTTGATTTTTATTCCTTTTAAAAATGGTTATTTCTAAACCTTAATTTAATAATTATTTAGATGGGAATAAAAGTAACTCCCAATCTAAAGCATATGAATCTTGAAATCATTATTTTATGAAAATTTATAAATTTAATCTAATTTAAAAAATAATTAAACTAATATGCTTACTTTATCTACTTCAATCACAAAAATTTAGTATTTATTTACCAAAAACTAAAAACTTATTTTTTTAGGTTTAAATTTGAAACTTATCGATTTTAATTTACTTCATGTCCAACTATGTATTTTAAATGCTACAATACTCTCAAACTAAGTTTAGTGTCTATTTTTTTTTTCTTAATAAATGGAGAACGTAATTTTTTAAAAAGGTATGTTATATTTTTTAGTTCAACTTATAGTGGGGAGAATTCAAATCTATGCTTTTGGTCGAAGATAGATGTATGTACTAGTTCAGCTATACTTAAGTTGGCATATATAGGTTGGCTTAAACGTAAACATGTAGATGTTAGATAATAAAAGAATGCTTAATCTTTTTAAGGTTTCAGACTAAATACATAATTTGAAATCATTACTAATTGGCTTCATAATGGTTATTGGGGCAACTGGAAAAAATAAATAGCTTAGAGGGAATTGGTTCAAACGATAATGGTCATTTACCTAATCGTTAATATCTTATGAATTTCTTTGGCAATTAAATATAATAGGATAAGATGATTGTCTCGTAGAATTAGCCGTGATGTCCATAAGTTAGCAAAAATACTCATGAATTATACAAATTATTTAAAAATTAAAACAAAAAAAACCTGAAAATTCATTTTTAAAAATATGATTTTGACCTAAATAATGAGTTTTCTATAAAAGAATGGTAAATTAAAAGTAGCACAAACTATAGTTACCAAAACTATATTTAAACCAAAACCATATTTTTGTCTTGTCCTTTTTAGTCCTATATTTGAACAAACATTTGGTGTGTTGAATCCAATTATTGTCACAAGAATGAGTCCTTAAACCAAATATGGAAAATGATTCTTAGATGGAGGAGTTCTACCAAAAACGGCAAAGCTCTCGAAGGGTGACGACATCAGTGGTAGGGCACCAGGTCCCGCTCTATGGCGGGATCTCAGCAATAGGAAATTGGCGAGACCAACGACAGGACGGGGTCGGTGTCGAGGTATCACTAAACCTCACGGTCGCTGTGAGGTCTAGAGCTTACATTCTAGGGAGGCTAGTGAAGTCTACATTTCATACAACTATTACATGTCCTATCACTCTTAGCACCAAGAAGCTTGGAAAATCTCACTCTTTCAACAATTCTTGCACTTACAATTGAACTTCCTATTCTCCTAATTTTGGAGTTTCTTAACAAATTTTGGGTAGCATTATATTTTATATGATCTATAATGTATTTTGTAAGTATTTCAAACACACTATGAAATTTTTGTTGCCTTTTTTGAATTTTTTTTACCTCTTTATTGTCATCTCTTCTTGTTTGTATCTAAACTTTATACATATTCTTTACTTTTTTTTT AAAAAACAGAGACTCATTCCTCTGTTTTTTCTTCTTCTTCCTCACAACAATGCACGCCAAGTCGTACTCGGAGGTCACGAGCGTGGACCAATCCTCGCCGGCGCGATCGCCGCGCCGGCCGCTTTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCCTACGGCTCGAGCCCCATGGGTTCACCGCCGCACCATTTTTACCACGCTTCTCCAATCCACCATTCTCGCGAGTCATCCACTTCCAGATTCTCTGCTTCGCTTAAGAACAACCCAAATCGGAATGGGAATCTCTCGGCTTGGAGAAAACTCCACCGTCCCCAGGATTCCGATGATGACGAGGAAGACGACGAGGACGAGGAAAACGATGATCGGGATTCGAAATGGAATCGGAAGTTTCGGTTGTACTTGATTTTGTTTCTGTTGTTTGTTCTTCTTTTCACTGTCTTTTCCGTCATCCTCTGGGGCGCTAGCAAGTCCTTCCACCCTCAAATCCTAATTCAGAGTATGGTATTCGAGAAGTTTAACGTACAAGCAGGGAGTGATCCGGGTGGTGTGGCAACAGATCTGATGTCATTAAATTCAACGGTCAGGATTACGTACAGAAATCCTGCCACGTTTTTCGGTGTCCACGTCAGCTCCACTCCATTTCAGCTTCAGTATTTCCAGCTCCAAGTAGCCTCTGGCCAGATGGAGGAGTTCTACCAAAAACGGCAAAGCTCTCGAAGGGTGACGACATCAGTGGTAGGGCACCAGGTCCCGCTCTATGGCGGGATCTCAGCAATAGGAAATTGGCGAGACCAACGACAGGACGGGGTCGGTGTCGAGGTATCACTAAACCTCACGGTCGCTGTGAGGTCTAGAGCTTACATTCTAGGGAGGCTAGTGAAGTCTACATTTCATACAACTATTACATGTCCTATCACTCTTAGCACCAAGAAGCTTGGAAAATCTCACTCTTTCAACAATTCTTGCACTTACAATTGAACTTCCTATTCTCCTAATTTTGGAGTTTCTTAACAAATTTTGGGTAGCATTATATTTTATATGATCTATAATGTATTTTGTAAGTATTTCAAACACACTATGAAATTTTTGTTGCCTTTTTTGAATTTTTTTTACCTCTTTATTGTCATCTCTTCTTGTTTGTATCTAAACTTTATACATATTCTTTACTTTTTTTTT ATGCACGCCAAGTCGTACTCGGAGGTCACGAGCGTGGACCAATCCTCGCCGGCGCGATCGCCGCGCCGGCCGCTTTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCCTACGGCTCGAGCCCCATGGGTTCACCGCCGCACCATTTTTACCACGCTTCTCCAATCCACCATTCTCGCGAGTCATCCACTTCCAGATTCTCTGCTTCGCTTAAGAACAACCCAAATCGGAATGGGAATCTCTCGGCTTGGAGAAAACTCCACCGTCCCCAGGATTCCGATGATGACGAGGAAGACGACGAGGACGAGGAAAACGATGATCGGGATTCGAAATGGAATCGGAAGTTTCGGTTGTACTTGATTTTGTTTCTGTTGTTTGTTCTTCTTTTCACTGTCTTTTCCGTCATCCTCTGGGGCGCTAGCAAGTCCTTCCACCCTCAAATCCTAATTCAGAGTATGGTATTCGAGAAGTTTAACGTACAAGCAGGGAGTGATCCGGGTGGTGTGGCAACAGATCTGATGTCATTAAATTCAACGGTCAGGATTACGTACAGAAATCCTGCCACGTTTTTCGGTGTCCACGTCAGCTCCACTCCATTTCAGCTTCAGTATTTCCAGCTCCAAGTAGCCTCTGGCCAGATGGAGGAGTTCTACCAAAAACGGCAAAGCTCTCGAAGGGTGACGACATCAGTGGTAGGGCACCAGGTCCCGCTCTATGGCGGGATCTCAGCAATAGGAAATTGGCGAGACCAACGACAGGACGGGGTCGGTGTCGAGGTATCACTAAACCTCACGGTCGCTGTGAGGTCTAGAGCTTACATTCTAGGGAGGCTAGTGAAGTCTACATTTCATACAACTATTACATGTCCTATCACTCTTAGCACCAAGAAGCTTGGAAAATCTCACTCTTTCAACAATTCTTGCACTTACAATTGA MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIHHSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDRDSKWNRKFRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQVPLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
BLAST of Lsi11G012450.1 vs. TrEMBL
Match: A0A0A0K4T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018790 PE=4 SV=1) HSP 1 Score: 570.5 bits (1469), Expect = 1.3e-159 Identity = 292/315 (92.70%), Postives = 300/315 (95.24%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TrEMBL
Match: A0A059APK6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01480 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.5e-99 Identity = 202/318 (63.52%), Postives = 242/318 (76.10%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TrEMBL
Match: M5VI16_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026873mg PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 4.8e-98 Identity = 203/319 (63.64%), Postives = 240/319 (75.24%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TrEMBL
Match: W9RTN2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014344 PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97 Identity = 192/314 (61.15%), Postives = 239/314 (76.11%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TrEMBL
Match: A0A0S3SE81_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G245200 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 4.5e-96 Identity = 198/319 (62.07%), Postives = 243/319 (76.18%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TAIR10
Match: AT2G41990.1 (AT2G41990.1 Late embryogenesis abundant protein, group 2 (InterPro:IPR004864)) HSP 1 Score: 257.7 bits (657), Expect = 9.4e-69 Identity = 159/316 (50.32%), Postives = 203/316 (64.24%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TAIR10
Match: AT4G35170.1 (AT4G35170.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 221.5 bits (563), Expect = 7.4e-58 Identity = 145/302 (48.01%), Postives = 188/302 (62.25%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TAIR10
Match: AT1G45688.1 (AT1G45688.1 unknown protein) HSP 1 Score: 219.5 bits (558), Expect = 2.8e-57 Identity = 150/342 (43.86%), Postives = 208/342 (60.82%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TAIR10
Match: AT5G42860.1 (AT5G42860.1 unknown protein) HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49 Identity = 139/341 (40.76%), Postives = 192/341 (56.30%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. TAIR10
Match: AT3G24600.1 (AT3G24600.1 Late embryogenesis abundant protein, group 2) HSP 1 Score: 112.5 bits (280), Expect = 4.9e-25 Identity = 85/257 (33.07%), Postives = 136/257 (52.92%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. NCBI nr
Match: gi|659094124|ref|XP_008447896.1| (PREDICTED: uncharacterized protein LOC103490245 [Cucumis melo]) HSP 1 Score: 579.3 bits (1492), Expect = 4.0e-162 Identity = 296/315 (93.97%), Postives = 305/315 (96.83%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. NCBI nr
Match: gi|449454263|ref|XP_004144875.1| (PREDICTED: uncharacterized protein LOC101215215 [Cucumis sativus]) HSP 1 Score: 570.5 bits (1469), Expect = 1.9e-159 Identity = 292/315 (92.70%), Postives = 300/315 (95.24%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. NCBI nr
Match: gi|702464018|ref|XP_010028799.1| (PREDICTED: uncharacterized protein LOC104419000 [Eucalyptus grandis]) HSP 1 Score: 370.9 bits (951), Expect = 2.2e-99 Identity = 202/318 (63.52%), Postives = 242/318 (76.10%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. NCBI nr
Match: gi|645261030|ref|XP_008236099.1| (PREDICTED: uncharacterized protein LOC103334887 [Prunus mume]) HSP 1 Score: 367.1 bits (941), Expect = 3.1e-98 Identity = 201/315 (63.81%), Postives = 238/315 (75.56%), Query Frame = 1
BLAST of Lsi11G012450.1 vs. NCBI nr
Match: gi|595791409|ref|XP_007199453.1| (hypothetical protein PRUPE_ppa026873mg [Prunus persica]) HSP 1 Score: 365.9 bits (938), Expect = 6.9e-98 Identity = 203/319 (63.64%), Postives = 240/319 (75.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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