Lsi11G012450 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G012450
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Late embryogenesis abundant protein
Location	chr11 : 21084017 .. 21088078 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACAGAGACTCATTCCTCTGTTTTTTCTTCTTCTTCCTCACAACAATGCACGCCAAGTCGTACTCGGAGGTCACGAGCGTGGACCAATCCTCGCCGGCGCGATCGCCGCGCCGGCCGCTTTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCCTACGGCTCGAGCCCCATGGGTTCACCGCCGCACCATTTTTACCACGCTTCTCCAATCCACCATTCTCGCGAGTCATCCACTTCCAGATTCTCTGCTTCGCTTAAGAACAACCCAAATCGGAATGGGAATCTCTCGGCTTGGAGAAAACTCCACCGTCCCCAGGATTCCGATGATGACGAGGAAGACGACGAGGACGAGGAAAACGATGATCGGGATTCGAAATGGAATCGGAAGTTTCGGTTGTACTTGATTTTGTTTCTGTTGTTTGTTCTTCTTTTCACTGTCTTTTCCGTCATCCTCTGGGGCGCTAGCAAGTCCTTCCACCCTCAAATCCTAATTCAGGTAATTAATTATCATTATTTTTTGTTTGAGGTTTCATTCTGAGTTTATGGGTATTCCGCTATTTGTTATTTGAAAATTTTCTTGATTTATCACTATAAAATTTGTTTTGACAAGAAGGGATAAGTTAATTTGAATTTTTAATTAATTATTTTGAAGAGTTTAGAGAGAATGAATTAAAGTCCTGAGACAATTAAGCTAAGATAAACTTGATTTTCAGCCCTCGAACGTTCGTAGAGCTACAATGCTTTAGCGAGATTAATTGAAGTGTGCATAAGTTGACTCAAATACTCGTAGATATTTTAAGAACATTAAGTTTGCTTTTTCTTTTATATCGTTTGAGTTTGAAGAATATCCCAAATAAAGATCGAACATTCTATCTTAAGTGATATGTGAGCATGTACGAGACTTAGTTAAGATGGTAACTTCATGCTGATTATTAATTTTTTTTTTAATATGAACATAGCTCAATGATAATGGTAATTTATGTTAATTTGATTGTATTTTTAGATTTAAGGTTTAAACCTATCTTTTTTAAAAAAAGATTTTCTCCATTTTTTTTTTTTTTTGGTATTTAATTGATTAAGATTATGTTCTTGGCCAAGGAGAGACAAGATGTTAAAATCTCTCCATCCTTGTTGAACTAAAAATAAAGTTGATTACTTTTTAAAGTTTAGATATTAAATATACTCTTGTTGATGAAACTCTTAACTCAATTAGTTAAAATATTTATTTTTATTTTTTTAATTTATATATTTAGTATGTCTACTTGTGTGTATTTTTTTTTTTTTTTAATAAAAGAGACTTATTTTAGTCGTAATTTGACATCATCTCAAATGTAAAACATGAAAATAAAAATTAGACCTAACTCAATTGGAGATTCAAATGTAAACGGATTAGTTAATTAATATTTGCAACTTTATTACATGAAATATATATATATATATATATATATATAATGATTACATGAAAAGGCGGAAATTATTATTAATAAATTTAAAAAACCGAAAAGAAGAAGCATGTTTTAAGATTGAAAAAACAAAACAAAATAATTTTTTGTTTTTTGGAAAATGTACAGAGTATGGTATTCGAGAAGTTTAACGTACAAGCAGGGAGTGATCCGGGTGGTGTGGCAACAGATCTGATGTCATTAAATTCAACGGTCAGGATTACGTACAGAAATCCTGCCACGTTTTTCGGTGTCCACGTCAGCTCCACTCCATTTCAGCTTCAGTATTTCCAGCTCCAAGTAGCCTCTGGCCAGGTGCTCTTCAATAACTCCACTCTAATCTCATTCTTAATTACGCCTCTTTAATTAATTTTTAATTACTTTAAAATGGCCTATTTATTAAAAATAGAGGAAGAAAACTTATAATTTAATGTTTAATTAAATTAATTGAAAATTTGAAAGTTAGGCATGGCAGGCACGTTGTAAGGTCGAATTAGATTAATAAGCCATTGATTTGTTTTTATTTAGGTGTTTTTTTTAGGGGCTTAGATTTTGAATAATTACAAAAGGGTTCCAATAAGAAATTGGAAATATATAATATAAAATATATTAAATATTATTTTTGGGTGAGACTTTTCAGACATTGGGAGTTGGGAAGGATTACCACTCGCAATCAAGTGTCTGAAACTCTGAACACTTGTAAGTCTTTTTCCATACGGCCCTTTTTTGTAATTTTCCCGTTGGACATAAAGCCCCATTTTCTTTTTTTTTTTTTTTTCAAATCCAAACTTTGATTTTTCTTTTGAAAGTTTTTTTGTTGAGAAACTTTCTTTTGACATTTTTACCATAGTATACAATAATAATTTTTTTTTATTTTTTGGTAATCCGTACAAATTTAGTTGGTGGCCCCAAATTTTTGGAAATTTTGGACATTGAAGTTTATATTAAAGCGTGTTTAGGGTTGTTTTTGTCGGGTAAAAAACAATTGAAGGAAAATTCTTTGATAAAACTAATTTTTATTCATTTATTTAAAATCAGCACGACAAATTTCGATTATCGAGTTTTTTTTGAAAATTTGATTTTTATTCCTTTTAAAAATGGTTATTTCTAAACCTTAATTTAATAATTATTTAGATGGGAATAAAAGTAACTCCCAATCTAAAGCATATGAATCTTGAAATCATTATTTTATGAAAATTTATAAATTTAATCTAATTTAAAAAATAATTAAACTAATATGCTTACTTTATCTACTTCAATCACAAAAATTTAGTATTTATTTACCAAAAACTAAAAACTTATTTTTTTAGGTTTAAATTTGAAACTTATCGATTTTAATTTACTTCATGTCCAACTATGTATTTTAAATGCTACAATACTCTCAAACTAAGTTTAGTGTCTATTTTTTTTTTCTTAATAAATGGAGAACGTAATTTTTTAAAAAGGTATGTTATATTTTTTAGTTCAACTTATAGTGGGGAGAATTCAAATCTATGCTTTTGGTCGAAGATAGATGTATGTACTAGTTCAGCTATACTTAAGTTGGCATATATAGGTTGGCTTAAACGTAAACATGTAGATGTTAGATAATAAAAGAATGCTTAATCTTTTTAAGGTTTCAGACTAAATACATAATTTGAAATCATTACTAATTGGCTTCATAATGGTTATTGGGGCAACTGGAAAAAATAAATAGCTTAGAGGGAATTGGTTCAAACGATAATGGTCATTTACCTAATCGTTAATATCTTATGAATTTCTTTGGCAATTAAATATAATAGGATAAGATGATTGTCTCGTAGAATTAGCCGTGATGTCCATAAGTTAGCAAAAATACTCATGAATTATACAAATTATTTAAAAATTAAAACAAAAAAAACCTGAAAATTCATTTTTAAAAATATGATTTTGACCTAAATAATGAGTTTTCTATAAAAGAATGGTAAATTAAAAGTAGCACAAACTATAGTTACCAAAACTATATTTAAACCAAAACCATATTTTTGTCTTGTCCTTTTTAGTCCTATATTTGAACAAACATTTGGTGTGTTGAATCCAATTATTGTCACAAGAATGAGTCCTTAAACCAAATATGGAAAATGATTCTTAGATGGAGGAGTTCTACCAAAAACGGCAAAGCTCTCGAAGGGTGACGACATCAGTGGTAGGGCACCAGGTCCCGCTCTATGGCGGGATCTCAGCAATAGGAAATTGGCGAGACCAACGACAGGACGGGGTCGGTGTCGAGGTATCACTAAACCTCACGGTCGCTGTGAGGTCTAGAGCTTACATTCTAGGGAGGCTAGTGAAGTCTACATTTCATACAACTATTACATGTCCTATCACTCTTAGCACCAAGAAGCTTGGAAAATCTCACTCTTTCAACAATTCTTGCACTTACAATTGAACTTCCTATTCTCCTAATTTTGGAGTTTCTTAACAAATTTTGGGTAGCATTATATTTTATATGATCTATAATGTATTTTGTAAGTATTTCAAACACACTATGAAATTTTTGTTGCCTTTTTTGAATTTTTTTTACCTCTTTATTGTCATCTCTTCTTGTTTGTATCTAAACTTTATACATATTCTTTACTTTTTTTTT

mRNA sequence

AAAAAACAGAGACTCATTCCTCTGTTTTTTCTTCTTCTTCCTCACAACAATGCACGCCAAGTCGTACTCGGAGGTCACGAGCGTGGACCAATCCTCGCCGGCGCGATCGCCGCGCCGGCCGCTTTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCCTACGGCTCGAGCCCCATGGGTTCACCGCCGCACCATTTTTACCACGCTTCTCCAATCCACCATTCTCGCGAGTCATCCACTTCCAGATTCTCTGCTTCGCTTAAGAACAACCCAAATCGGAATGGGAATCTCTCGGCTTGGAGAAAACTCCACCGTCCCCAGGATTCCGATGATGACGAGGAAGACGACGAGGACGAGGAAAACGATGATCGGGATTCGAAATGGAATCGGAAGTTTCGGTTGTACTTGATTTTGTTTCTGTTGTTTGTTCTTCTTTTCACTGTCTTTTCCGTCATCCTCTGGGGCGCTAGCAAGTCCTTCCACCCTCAAATCCTAATTCAGAGTATGGTATTCGAGAAGTTTAACGTACAAGCAGGGAGTGATCCGGGTGGTGTGGCAACAGATCTGATGTCATTAAATTCAACGGTCAGGATTACGTACAGAAATCCTGCCACGTTTTTCGGTGTCCACGTCAGCTCCACTCCATTTCAGCTTCAGTATTTCCAGCTCCAAGTAGCCTCTGGCCAGATGGAGGAGTTCTACCAAAAACGGCAAAGCTCTCGAAGGGTGACGACATCAGTGGTAGGGCACCAGGTCCCGCTCTATGGCGGGATCTCAGCAATAGGAAATTGGCGAGACCAACGACAGGACGGGGTCGGTGTCGAGGTATCACTAAACCTCACGGTCGCTGTGAGGTCTAGAGCTTACATTCTAGGGAGGCTAGTGAAGTCTACATTTCATACAACTATTACATGTCCTATCACTCTTAGCACCAAGAAGCTTGGAAAATCTCACTCTTTCAACAATTCTTGCACTTACAATTGAACTTCCTATTCTCCTAATTTTGGAGTTTCTTAACAAATTTTGGGTAGCATTATATTTTATATGATCTATAATGTATTTTGTAAGTATTTCAAACACACTATGAAATTTTTGTTGCCTTTTTTGAATTTTTTTTACCTCTTTATTGTCATCTCTTCTTGTTTGTATCTAAACTTTATACATATTCTTTACTTTTTTTTT

Coding sequence (CDS)

ATGCACGCCAAGTCGTACTCGGAGGTCACGAGCGTGGACCAATCCTCGCCGGCGCGATCGCCGCGCCGGCCGCTTTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCCTACGGCTCGAGCCCCATGGGTTCACCGCCGCACCATTTTTACCACGCTTCTCCAATCCACCATTCTCGCGAGTCATCCACTTCCAGATTCTCTGCTTCGCTTAAGAACAACCCAAATCGGAATGGGAATCTCTCGGCTTGGAGAAAACTCCACCGTCCCCAGGATTCCGATGATGACGAGGAAGACGACGAGGACGAGGAAAACGATGATCGGGATTCGAAATGGAATCGGAAGTTTCGGTTGTACTTGATTTTGTTTCTGTTGTTTGTTCTTCTTTTCACTGTCTTTTCCGTCATCCTCTGGGGCGCTAGCAAGTCCTTCCACCCTCAAATCCTAATTCAGAGTATGGTATTCGAGAAGTTTAACGTACAAGCAGGGAGTGATCCGGGTGGTGTGGCAACAGATCTGATGTCATTAAATTCAACGGTCAGGATTACGTACAGAAATCCTGCCACGTTTTTCGGTGTCCACGTCAGCTCCACTCCATTTCAGCTTCAGTATTTCCAGCTCCAAGTAGCCTCTGGCCAGATGGAGGAGTTCTACCAAAAACGGCAAAGCTCTCGAAGGGTGACGACATCAGTGGTAGGGCACCAGGTCCCGCTCTATGGCGGGATCTCAGCAATAGGAAATTGGCGAGACCAACGACAGGACGGGGTCGGTGTCGAGGTATCACTAAACCTCACGGTCGCTGTGAGGTCTAGAGCTTACATTCTAGGGAGGCTAGTGAAGTCTACATTTCATACAACTATTACATGTCCTATCACTCTTAGCACCAAGAAGCTTGGAAAATCTCACTCTTTCAACAATTCTTGCACTTACAATTGA

Protein sequence

MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIHHSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDRDSKWNRKFRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQVPLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

Homology

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BLAST of Lsi11G012450 vs. TrEMBL
Match: A0A0A0K4T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018790 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.3e-159
Identity = 292/315 (92.70%), Postives = 300/315 (95.24%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60
           MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH
Sbjct: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60

Query: 61  HSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSD-DDEEDDEDEENDDRDSKWNRKF 120
           HSRESSTSRFSASLK N NRNGN+SAWRKLH  QDSD DDEEDDE+EEN+DRDSKWNRKF
Sbjct: 61  HSRESSTSRFSASLKINQNRNGNVSAWRKLHHAQDSDGDDEEDDEEEENEDRDSKWNRKF 120

Query: 121 RLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMSL 180
           RLYLILFL F+LLFTVFS+ILWGASKSFHPQILIQSMVF KFNVQAGSDPGGVATDLMSL
Sbjct: 121 RLYLILFLFFILLFTVFSLILWGASKSFHPQILIQSMVFSKFNVQAGSDPGGVATDLMSL 180

Query: 181 NSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQV 240
           NSTVRI+Y+NPATFFGVHVSSTP QL Y QLQVASGQMEEFYQKRQSSRRV TSV GHQV
Sbjct: 181 NSTVRISYKNPATFFGVHVSSTPIQLHYLQLQVASGQMEEFYQKRQSSRRVVTSVAGHQV 240

Query: 241 PLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTK 300
           PLYGGISAIGNWRDQRQDG GVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLST 
Sbjct: 241 PLYGGISAIGNWRDQRQDGAGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTN 300

Query: 301 KLGKSHSFNNSCTYN 315
           KLGKSHSFNN+C YN
Sbjct: 301 KLGKSHSFNNTCIYN 315

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BLAST of Lsi11G012450 vs. TrEMBL
Match: A0A059APK6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01480 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.5e-99
Identity = 202/318 (63.52%), Postives = 242/318 (76.10%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQ-SSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPI 60
           MHAKS SEVTS+D  SSP RSPRRPLYYVQSPSNHD EKMSYGSSP GSP H +YH SPI
Sbjct: 5   MHAKSDSEVTSMDAASSPPRSPRRPLYYVQSPSNHDAEKMSYGSSPAGSPTHPYYHCSPI 64

Query: 61  HHSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDR---DSKWN 120
           HHSRESSTSRFSASLKN+  R+    AWRKLHR  ++DDDE+D+E++    R    S W 
Sbjct: 65  HHSRESSTSRFSASLKNSNPRHLYGGAWRKLHRGHETDDDEDDEEEDGEGGRRGSSSAW- 124

Query: 121 RKFRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDL 180
           R  RLY    LLFVLLFT FS+ILWGASKS+ P+I+++++VFE FNVQAG+DP GV TD+
Sbjct: 125 RGARLYACFVLLFVLLFTAFSLILWGASKSYRPEIVVKNVVFENFNVQAGNDPSGVPTDM 184

Query: 181 MSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVG 240
           ++LNSTVR+ YRNPATFFGVHV+S+P  L YFQL +ASG M++FYQ R+S R V T V G
Sbjct: 185 LTLNSTVRMVYRNPATFFGVHVTSSPLDLHYFQLHLASGHMKKFYQSRKSQRPVVTMVAG 244

Query: 241 HQVPLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITL 300
           +QVPLYGGIS +   R+ R+    V V LNLT  VRSRAYILG+LVKS F+  I C +TL
Sbjct: 245 YQVPLYGGISVLSMAREHREK---VAVPLNLTFVVRSRAYILGKLVKSKFYRKIRCSVTL 304

Query: 301 STKKLGKSHSFNNSCTYN 315
              +LGK  +  + CTY+
Sbjct: 305 RGNQLGKRQNLTDLCTYH 318

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BLAST of Lsi11G012450 vs. TrEMBL
Match: M5VI16_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026873mg PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 4.8e-98
Identity = 203/319 (63.64%), Postives = 240/319 (75.24%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60
           MHAKS SEVTSV+QS+P RSPRRP+YYVQSPSNHDVEKMSYGSSP GSP HHFYH SPIH
Sbjct: 1   MHAKSDSEVTSVEQSTPPRSPRRPIYYVQSPSNHDVEKMSYGSSPAGSPGHHFYHCSPIH 60

Query: 61  HSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDRDSKW--NRK 120
           HSRESSTSRFSASLKN  +    LSAWRKL R ++   +E DD+D+END    K    R 
Sbjct: 61  HSRESSTSRFSASLKNPRS----LSAWRKLQRGEEV--EESDDDDDENDTGFWKGGPGRS 120

Query: 121 FRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMS 180
            RLY    LLFV+LFT FS+ILWGASK++ PQ++++S+VFE F++QAGSD  GV TD++S
Sbjct: 121 VRLYFCFALLFVVLFTAFSLILWGASKAYEPQVIVKSIVFESFDIQAGSDRTGVPTDMLS 180

Query: 181 LNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQ 240
           LNSTVRI YRNPATFFGVHV+STP +L Y+QL+VASGQ+E FYQ R++ R + T V+G Q
Sbjct: 181 LNSTVRIHYRNPATFFGVHVTSTPLELHYYQLKVASGQIENFYQARKTHRTIRTVVLGSQ 240

Query: 241 VPLYGGISAI----GNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPI 300
           V LYGG+S +     N R QR     V V LNLT  VRSRAYILG+LVKS F+  I C +
Sbjct: 241 VALYGGVSVVQDVSENLRRQR-----VAVPLNLTFVVRSRAYILGKLVKSKFYERIRCSV 300

Query: 301 TLSTKKLGKSHSFNNSCTY 314
           TL    LGK  +  NSC Y
Sbjct: 301 TLRGSNLGKHSNLTNSCVY 308

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BLAST of Lsi11G012450 vs. TrEMBL
Match: W9RTN2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014344 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 192/314 (61.15%), Postives = 239/314 (76.11%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60
           MHAKS SEVTS DQS+P RSPRRPLYYVQSPSNHDVEKMSYGSSP+GSP HH+YH SPIH
Sbjct: 8   MHAKSDSEVTSFDQSTPPRSPRRPLYYVQSPSNHDVEKMSYGSSPLGSPHHHYYHCSPIH 67

Query: 61  HSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDRDSKWNRKFR 120
           HSRESSTSRFSASLKN      NLSAW+K+ R ++SD +++DD+D      D    R  R
Sbjct: 68  HSRESSTSRFSASLKN----TRNLSAWKKIQRGEESDHEDDDDDDR----NDYGPGRNVR 127

Query: 121 LYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMSLN 180
           L     L FV+LFT+FS+ILWGASKS+ PQ++++ +VF +F++QAG+D  GV TD++++N
Sbjct: 128 LCFCFALFFVVLFTLFSLILWGASKSYKPQVVVEHVVFRRFSIQAGNDRTGVPTDMLTMN 187

Query: 181 STVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQVP 240
           STVRI YRNP TFFGVHV+STP +  Y++L+VASGQM++FYQ+R+S R   T+V+G QVP
Sbjct: 188 STVRIFYRNPGTFFGVHVTSTPLEFHYYELKVASGQMKKFYQQRKSHRTTVTTVLGSQVP 247

Query: 241 LYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTKK 300
           LYGG+S IG  RD   + V   V LNLT  VRSRAYILG+LVKS F+  + CP+TL   K
Sbjct: 248 LYGGLSVIGGARDNIDNMV---VPLNLTFVVRSRAYILGKLVKSKFYRRVRCPVTLKGNK 307

Query: 301 LGKSHSFNNSCTYN 315
           LG      +SC Y+
Sbjct: 308 LGNPFKMVDSCIYH 310

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BLAST of Lsi11G012450 vs. TrEMBL
Match: A0A0S3SE81_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G245200 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.5e-96
Identity = 198/319 (62.07%), Postives = 243/319 (76.18%), Query Frame = 1


Query: 1   MHAKSYSEVTS--VDQSSPARSP-RRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYH-- 60
           MH KS SEVTS  ++QSSPARSP RRPLYYVQSPSNHDVEKMSYGSSPMGSP HHF++  
Sbjct: 5   MHTKSDSEVTSNSMEQSSPARSPPRRPLYYVQSPSNHDVEKMSYGSSPMGSPHHHFHYYL 64

Query: 61  ASPIHHSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEEND-DRDSK 120
           +SPIHHSRESSTSRFSASLKN  N + N   W+KLH     D D +DD D+ +D DR S 
Sbjct: 65  SSPIHHSRESSTSRFSASLKNPRNFSSN---WKKLHPHPQHDADPDDDADDGDDLDRSS- 124

Query: 121 WNRKFRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVAT 180
             R  RLY   FLLF++LFT+F+VILWGASKS+ P+++++SMVFE  NVQ+G+D  GV T
Sbjct: 125 --RNLRLYFCFFLLFLMLFTLFAVILWGASKSYKPRLIVKSMVFENLNVQSGNDGSGVPT 184

Query: 181 DLMSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSV 240
           D++SLNSTVRI YRNPATFFGVHV+STP +L Y+QL + SGQM +FYQ R+S R++T  V
Sbjct: 185 DMLSLNSTVRIVYRNPATFFGVHVTSTPLELSYYQLAIGSGQMRKFYQSRKSDRKLTVVV 244

Query: 241 VGHQVPLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPI 300
            GHQ+PLYGG+S +GN ++  +    V + LNLT  VRSRA+ILGRLVKS F+  + C +
Sbjct: 245 FGHQIPLYGGVSVLGNTKEHLE---SVALPLNLTFTVRSRAFILGRLVKSKFYRRVRCSV 304

Query: 301 TLSTKKLGKSHSFNNSCTY 314
           TL   KLGK  +  +SC Y
Sbjct: 305 TLHGNKLGKPLNLTDSCVY 314

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BLAST of Lsi11G012450 vs. TAIR10
Match: AT2G41990.1 (AT2G41990.1 Late embryogenesis abundant protein, group 2 (InterPro:IPR004864))

HSP 1 Score: 257.7 bits (657), Expect = 9.4e-69
Identity = 159/316 (50.32%), Postives = 203/316 (64.24%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQS--SPARSPRRPLYYVQSPSNHDVEKMSYGS--SPMGSPPH-HFYH 60
           MHAK+ SE TS+D +  SP RS  RPLYYVQSPSNHDVEKMS+GS  S MGSP H H+YH
Sbjct: 1   MHAKTDSEATSIDAAALSPPRSAIRPLYYVQSPSNHDVEKMSFGSGCSLMGSPTHPHYYH 60

Query: 61  ASPIHHSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDRDSKW 120
            SPIHHSRESSTSRFS         +  L +++ +   +   +D +D  D  +DD     
Sbjct: 61  CSPIHHSRESSTSRFS---------DRALLSYKSIRERRRYINDGDDKTDGGDDDDPF-- 120

Query: 121 NRKFRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATD 180
            R  RLY+ L L  + LFTVFS+ILWGASKS+ P++ ++ M+    N+QAG+D  GV TD
Sbjct: 121 -RNVRLYVWLLLSVIFLFTVFSLILWGASKSYPPKVTVKGMLVRDLNLQAGNDLSGVPTD 180

Query: 181 LMSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVV 240
           ++SLNSTVRI YRNP+TFF VHV+++P  L Y  L ++SG+M +F   R     V T V 
Sbjct: 181 MLSLNSTVRIYYRNPSTFFAVHVTASPLLLHYSNLLLSSGEMNKFTVGRNGETNVVTVVQ 240

Query: 241 GHQVPLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPIT 300
           GHQ+PLYGG+S   +          + + LNLT+ + S+AYILGRLV S F+T I C  T
Sbjct: 241 GHQIPLYGGVSFHLD---------TLSLPLNLTIVLHSKAYILGRLVTSKFYTRIICSFT 295

Query: 301 LSTKKLGKSHSFNNSC 312
           L    L KS S   SC
Sbjct: 301 LDANHLPKSISLLRSC 295

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BLAST of Lsi11G012450 vs. TAIR10
Match: AT4G35170.1 (AT4G35170.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 221.5 bits (563), Expect = 7.4e-58
Identity = 145/302 (48.01%), Postives = 188/302 (62.25%), Query Frame = 1


Query: 14  QSSPARSPRRPLYYVQSPSNHDVEKMSYGS--SPMGSPPHHFYHASPIHHSRESSTSRFS 73
           +SSP ++ R+P+Y V SP N DV+K+S GS  SP GSP +     S   H   + +S + 
Sbjct: 7   RSSP-QNTRKPVYVVHSPPNTDVDKISTGSGFSPFGSPLNDQGQVSNFQHHSVAESSSYP 66

Query: 74  ASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDED-EENDDRDSKWNRKFRLYLILFLLFV 133
            S  + P RN   S   ++H   D D    +DED +E D  D K  R  R Y  L    V
Sbjct: 67  RS--SGPLRNEYSSV--QVH---DLDRRTHEDEDYDEMDGPDEKRRRITRFYSCLLFTLV 126

Query: 134 LLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMSLNSTVRITYRNP 193
           L FT+F +ILWG SKSF P   ++ MV E  NVQ+G+D  GV TD+++LNSTVRI YRNP
Sbjct: 127 LAFTLFCLILWGVSKSFAPIATLKEMVLENLNVQSGNDQSGVLTDMLTLNSTVRILYRNP 186

Query: 194 ATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQVPLYGGISAIGN 253
           ATFF VHV+S P QL Y QL +ASGQM EF Q+R+S R + T V G Q+PLYGG+ A+  
Sbjct: 187 ATFFTVHVTSAPLQLSYSQLILASGQMGEFSQRRKSERIIETKVFGDQIPLYGGVPALFG 246

Query: 254 WRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTKKLGKSHSFNNS 313
              QR +   V + LNLT  +R+RAY+LGRLVK+TFH+ I C IT    KLGK+   + S
Sbjct: 247 ---QRAEPDQVVLPLNLTFTLRARAYVLGRLVKTTFHSNIKCSITFYGDKLGKTLDLSKS 297

[Close]

BLAST of Lsi11G012450 vs. TAIR10
Match: AT1G45688.1 (AT1G45688.1 unknown protein)

HSP 1 Score: 219.5 bits (558), Expect = 2.8e-57
Identity = 150/342 (43.86%), Postives = 208/342 (60.82%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPS--NHDVEKM--SYGS----SPMGSPPHH 60
           MHAK+ SEVTS+  SSPARSPRRP+YYVQSPS  +HD EK   S+ S    SPMGSPPH 
Sbjct: 1   MHAKTDSEVTSLAASSPARSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVLSPMGSPPHS 60

Query: 61  FYHASPIHHSRESSTSRFSASLKNNPNR-NGNLSAWRKLHRPQDSDDDEEDDEDE---EN 120
             H+S   HSRESS+SRFS SLK    + N N  + RK H  +    +    E+E   ++
Sbjct: 61  --HSSMGRHSRESSSSRFSGSLKPGSRKVNPNDGSKRKGHGGEKQWKECAVIEEEGLLDD 120

Query: 121 DDRDSKWNRKFRLYLILFLL-FVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGS 180
            DRD    R  R Y++ F++ F +LF  FS+IL+GA+K   P+I ++S+ FE   +QAG 
Sbjct: 121 GDRDGGVPR--RCYVLAFIVGFFILFGFFSLILYGAAKPMKPKITVKSITFETLKIQAGQ 180

Query: 181 DPGGVATDLMSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSS 240
           D GGV TD++++N+T+R+ YRN  TFFGVHV+STP  L + Q+++ SG +++FYQ R+S 
Sbjct: 181 DAGGVGTDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVKKFYQGRKSE 240

Query: 241 RRVTTSVVGHQVPLYGGISAI-------GNWRDQRQDGVGV----------EVSLNLTVA 300
           R V   V+G ++PLYG  S +          + +++ G  V           V + L+  
Sbjct: 241 RTVLVHVIGEKIPLYGSGSTLLPPAPPAPLPKPKKKKGAPVPIPDPPAPPAPVPMTLSFV 300

Query: 301 VRSRAYILGRLVKSTFHTTITCPITLSTKKLGKSHSFNNSCT 313
           VRSRAY+LG+LV+  F+  I C I    K L K      +CT
Sbjct: 301 VRSRAYVLGKLVQPKFYKKIECDINFEHKNLNKHIVITKNCT 338

[Close]

BLAST of Lsi11G012450 vs. TAIR10
Match: AT5G42860.1 (AT5G42860.1 unknown protein)

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49
Identity = 139/341 (40.76%), Postives = 192/341 (56.30%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPS--NHDVEKMSYG-------SSPMGSPPH 60
           MHAK+ SEVTS+  SSP RSPRRP Y+VQSPS  +HD EK +         +SPMGSPPH
Sbjct: 1   MHAKTDSEVTSLSASSPTRSPRRPAYFVQSPSRDSHDGEKTATSFHSTPVLTSPMGSPPH 60

Query: 61  HFYHASPIHHSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEE---DDEDEEN 120
                        SS+SRFS    N   R G+          Q +  +EE   DD D E 
Sbjct: 61  -----------SHSSSSRFSKI--NGSKRKGHAG------EKQFAMIEEEGLLDDGDREQ 120

Query: 121 DDRDSKWNRKFRLYLILFLL-FVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGS 180
           +          R Y++ F++ F LLF  FS+IL+ A+K   P+I ++S+ FE+  VQAG 
Sbjct: 121 EALPR------RCYVLAFIVGFSLLFAFFSLILYAAAKPQKPKISVKSITFEQLKVQAGQ 180

Query: 181 DPGGVATDLMSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSS 240
           D GG+ TD++++N+T+R+ YRN  TFFGVHV+S+P  L + Q+ + SG +++FYQ R+S 
Sbjct: 181 DAGGIGTDMITMNATLRMLYRNTGTFFGVHVTSSPIDLSFSQITIGSGSIKKFYQSRKSQ 240

Query: 241 RRVTTSVVGHQVPLYGGISA---------IGNWRDQRQDGVGVE-------VSLNLTVAV 300
           R V  +V+G ++PLYG  S          I   + ++   V VE       V + L   V
Sbjct: 241 RTVVVNVLGDKIPLYGSGSTLVPPPPPAPIPKPKKKKGPIVIVEPPAPPAPVPMRLNFTV 300

Query: 301 RSRAYILGRLVKSTFHTTITCPITLSTKKLGKSHSFNNSCT 313
           RSRAY+LG+LV+  F+  I C I    KKL K     N+CT
Sbjct: 301 RSRAYVLGKLVQPKFYKRIVCLINFEHKKLSKHIPITNNCT 316

[Close]

BLAST of Lsi11G012450 vs. TAIR10
Match: AT3G24600.1 (AT3G24600.1 Late embryogenesis abundant protein, group 2)

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-25
Identity = 85/257 (33.07%), Postives = 136/257 (52.92%), Query Frame = 1


Query: 58  PIHHSRES--STSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEED---DEDEENDDRD 117
           P+H    +  S SR S+S + +   +G    W+   R  +    E+    +EDE  DD  
Sbjct: 249 PVHTPNYTILSESRLSSSSRTSNGTSGMGFRWKGSSRRSNMYWPEKPYTINEDEVYDDNR 308

Query: 118 SKWNRKFRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGV 177
                + R  L++ L  V++F+VF  +LWGAS  F P + ++S+    F    G D  GV
Sbjct: 309 GLSVGQCRAVLVI-LGTVVVFSVFCSVLWGASHPFSPIVSVKSVDIHSFYYGEGIDRTGV 368

Query: 178 ATDLMSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTT 237
           AT ++S NS+V++T  +PA +FG+HVSS+ F+L +  L +A+GQ++ +YQ R+S      
Sbjct: 369 ATKILSFNSSVKVTIDSPAPYFGIHVSSSTFKLTFSALTLATGQLKSYYQPRKSKHISIV 428

Query: 238 SVVGHQVPLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITC 297
            + G +VPLYG    +        D  G +V + L   +RSR  +LG+LVKS     ++C
Sbjct: 429 KLTGAEVPLYGAGPHLA-----ASDKKG-KVPVKLEFEIRSRGNLLGKLVKSKHENHVSC 488

Query: 298 PITLSTKKLGKSHSFNN 310
              +S+ K  K   F +
Sbjct: 489 SFFISSSKTSKPIEFTH 498

[Close]

BLAST of Lsi11G012450 vs. NCBI nr
Match: gi|659094124|ref|XP_008447896.1| (PREDICTED: uncharacterized protein LOC103490245 [Cucumis melo])

HSP 1 Score: 579.3 bits (1492), Expect = 4.0e-162
Identity = 296/315 (93.97%), Postives = 305/315 (96.83%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60
           MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH
Sbjct: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60

Query: 61  HSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDD-EEDDEDEENDDRDSKWNRKF 120
           HSRESSTSRFSASLK+N NRNGN+SAWRKLH  +DSDDD EEDD DEEN+DRDSKWNRKF
Sbjct: 61  HSRESSTSRFSASLKSNQNRNGNVSAWRKLHLAEDSDDDDEEDDGDEENEDRDSKWNRKF 120

Query: 121 RLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMSL 180
           RLYLILFL FVLLFTVFS+ILWGASKSFHPQILIQSMVF KFNVQAGSDPGGVATDLMSL
Sbjct: 121 RLYLILFLFFVLLFTVFSLILWGASKSFHPQILIQSMVFSKFNVQAGSDPGGVATDLMSL 180

Query: 181 NSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQV 240
           NSTVRI+YRNPATFFGVHVSSTPFQL YFQLQ+ASGQMEEFYQKRQSSRR+ TSV GHQV
Sbjct: 181 NSTVRISYRNPATFFGVHVSSTPFQLHYFQLQIASGQMEEFYQKRQSSRRMVTSVAGHQV 240

Query: 241 PLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTK 300
           PLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTK
Sbjct: 241 PLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTK 300

Query: 301 KLGKSHSFNNSCTYN 315
           KLGKSHSFNN+CTYN
Sbjct: 301 KLGKSHSFNNTCTYN 315

[Close]

BLAST of Lsi11G012450 vs. NCBI nr
Match: gi|449454263|ref|XP_004144875.1| (PREDICTED: uncharacterized protein LOC101215215 [Cucumis sativus])

HSP 1 Score: 570.5 bits (1469), Expect = 1.9e-159
Identity = 292/315 (92.70%), Postives = 300/315 (95.24%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60
           MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH
Sbjct: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60

Query: 61  HSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSD-DDEEDDEDEENDDRDSKWNRKF 120
           HSRESSTSRFSASLK N NRNGN+SAWRKLH  QDSD DDEEDDE+EEN+DRDSKWNRKF
Sbjct: 61  HSRESSTSRFSASLKINQNRNGNVSAWRKLHHAQDSDGDDEEDDEEEENEDRDSKWNRKF 120

Query: 121 RLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMSL 180
           RLYLILFL F+LLFTVFS+ILWGASKSFHPQILIQSMVF KFNVQAGSDPGGVATDLMSL
Sbjct: 121 RLYLILFLFFILLFTVFSLILWGASKSFHPQILIQSMVFSKFNVQAGSDPGGVATDLMSL 180

Query: 181 NSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQV 240
           NSTVRI+Y+NPATFFGVHVSSTP QL Y QLQVASGQMEEFYQKRQSSRRV TSV GHQV
Sbjct: 181 NSTVRISYKNPATFFGVHVSSTPIQLHYLQLQVASGQMEEFYQKRQSSRRVVTSVAGHQV 240

Query: 241 PLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTK 300
           PLYGGISAIGNWRDQRQDG GVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLST 
Sbjct: 241 PLYGGISAIGNWRDQRQDGAGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSTN 300

Query: 301 KLGKSHSFNNSCTYN 315
           KLGKSHSFNN+C YN
Sbjct: 301 KLGKSHSFNNTCIYN 315

[Close]

BLAST of Lsi11G012450 vs. NCBI nr
Match: gi|702464018|ref|XP_010028799.1| (PREDICTED: uncharacterized protein LOC104419000 [Eucalyptus grandis])

HSP 1 Score: 370.9 bits (951), Expect = 2.2e-99
Identity = 202/318 (63.52%), Postives = 242/318 (76.10%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQ-SSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPI 60
           MHAKS SEVTS+D  SSP RSPRRPLYYVQSPSNHD EKMSYGSSP GSP H +YH SPI
Sbjct: 5   MHAKSDSEVTSMDAASSPPRSPRRPLYYVQSPSNHDAEKMSYGSSPAGSPTHPYYHCSPI 64

Query: 61  HHSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDR---DSKWN 120
           HHSRESSTSRFSASLKN+  R+    AWRKLHR  ++DDDE+D+E++    R    S W 
Sbjct: 65  HHSRESSTSRFSASLKNSNPRHLYGGAWRKLHRGHETDDDEDDEEEDGEGGRRGSSSAW- 124

Query: 121 RKFRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDL 180
           R  RLY    LLFVLLFT FS+ILWGASKS+ P+I+++++VFE FNVQAG+DP GV TD+
Sbjct: 125 RGARLYACFVLLFVLLFTAFSLILWGASKSYRPEIVVKNVVFENFNVQAGNDPSGVPTDM 184

Query: 181 MSLNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVG 240
           ++LNSTVR+ YRNPATFFGVHV+S+P  L YFQL +ASG M++FYQ R+S R V T V G
Sbjct: 185 LTLNSTVRMVYRNPATFFGVHVTSSPLDLHYFQLHLASGHMKKFYQSRKSQRPVVTMVAG 244

Query: 241 HQVPLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITL 300
           +QVPLYGGIS +   R+ R+    V V LNLT  VRSRAYILG+LVKS F+  I C +TL
Sbjct: 245 YQVPLYGGISVLSMAREHREK---VAVPLNLTFVVRSRAYILGKLVKSKFYRKIRCSVTL 304

Query: 301 STKKLGKSHSFNNSCTYN 315
              +LGK  +  + CTY+
Sbjct: 305 RGNQLGKRQNLTDLCTYH 318

[Close]

BLAST of Lsi11G012450 vs. NCBI nr
Match: gi|645261030|ref|XP_008236099.1| (PREDICTED: uncharacterized protein LOC103334887 [Prunus mume])

HSP 1 Score: 367.1 bits (941), Expect = 3.1e-98
Identity = 201/315 (63.81%), Postives = 238/315 (75.56%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60
           MHAKS SEVTSV+QS+P RSPRRP+YYVQSPSNHDVEKMSYGSSP GSP HHFYH SPIH
Sbjct: 1   MHAKSDSEVTSVEQSTPPRSPRRPIYYVQSPSNHDVEKMSYGSSPAGSPAHHFYHCSPIH 60

Query: 61  HSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDRDSKW--NRK 120
           HSRESSTSRFSASLKN  +    LSAWRKL R    + +E DD+D+END    K    R 
Sbjct: 61  HSRESSTSRFSASLKNPRS----LSAWRKLQR--GDEVEESDDDDDENDTAFGKGGPGRS 120

Query: 121 FRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMS 180
            RLY    LLFV+LFT FS+ILWGASK++ PQ++++S+VFE F +QAGSD  GV TD++S
Sbjct: 121 VRLYFCFALLFVVLFTAFSLILWGASKAYEPQVIVKSIVFESFEIQAGSDRTGVPTDMLS 180

Query: 181 LNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQ 240
           LNSTVRI YRNPATFFGVHV+STP +L Y+QL+VASGQ+E FYQ R++ R + T V+G Q
Sbjct: 181 LNSTVRIHYRNPATFFGVHVTSTPLELHYYQLKVASGQIENFYQARKTHRTIRTVVLGSQ 240

Query: 241 VPLYGGISAIGNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPITLST 300
           V LYGG+S + +  + RQ    V V LNLT  VRSRAYILG+LVKS F+  I C +TL  
Sbjct: 241 VALYGGVSVVQDVSENRQ-RQRVAVPLNLTFVVRSRAYILGKLVKSKFYERIRCSVTLRG 300

Query: 301 KKLGKSHSFNNSCTY 314
             LGK  +  NSC Y
Sbjct: 301 SNLGKHSNLTNSCVY 308

[Close]

BLAST of Lsi11G012450 vs. NCBI nr
Match: gi|595791409|ref|XP_007199453.1| (hypothetical protein PRUPE_ppa026873mg [Prunus persica])

HSP 1 Score: 365.9 bits (938), Expect = 6.9e-98
Identity = 203/319 (63.64%), Postives = 240/319 (75.24%), Query Frame = 1


Query: 1   MHAKSYSEVTSVDQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIH 60
           MHAKS SEVTSV+QS+P RSPRRP+YYVQSPSNHDVEKMSYGSSP GSP HHFYH SPIH
Sbjct: 1   MHAKSDSEVTSVEQSTPPRSPRRPIYYVQSPSNHDVEKMSYGSSPAGSPGHHFYHCSPIH 60

Query: 61  HSRESSTSRFSASLKNNPNRNGNLSAWRKLHRPQDSDDDEEDDEDEENDDRDSKW--NRK 120
           HSRESSTSRFSASLKN  +    LSAWRKL R ++   +E DD+D+END    K    R 
Sbjct: 61  HSRESSTSRFSASLKNPRS----LSAWRKLQRGEEV--EESDDDDDENDTGFWKGGPGRS 120

Query: 121 FRLYLILFLLFVLLFTVFSVILWGASKSFHPQILIQSMVFEKFNVQAGSDPGGVATDLMS 180
            RLY    LLFV+LFT FS+ILWGASK++ PQ++++S+VFE F++QAGSD  GV TD++S
Sbjct: 121 VRLYFCFALLFVVLFTAFSLILWGASKAYEPQVIVKSIVFESFDIQAGSDRTGVPTDMLS 180

Query: 181 LNSTVRITYRNPATFFGVHVSSTPFQLQYFQLQVASGQMEEFYQKRQSSRRVTTSVVGHQ 240
           LNSTVRI YRNPATFFGVHV+STP +L Y+QL+VASGQ+E FYQ R++ R + T V+G Q
Sbjct: 181 LNSTVRIHYRNPATFFGVHVTSTPLELHYYQLKVASGQIENFYQARKTHRTIRTVVLGSQ 240

Query: 241 VPLYGGISAI----GNWRDQRQDGVGVEVSLNLTVAVRSRAYILGRLVKSTFHTTITCPI 300
           V LYGG+S +     N R QR     V V LNLT  VRSRAYILG+LVKS F+  I C +
Sbjct: 241 VALYGGVSVVQDVSENLRRQR-----VAVPLNLTFVVRSRAYILGKLVKSKFYERIRCSV 300

Query: 301 TLSTKKLGKSHSFNNSCTY 314
           TL    LGK  +  NSC Y
Sbjct: 301 TLRGSNLGKHSNLTNSCVY 308

The following BLAST results are available for this feature:

BLAST of Lsi11G012450 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G012450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4T2_CUCSA	1.3e-159	92.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018790 PE=4 SV=1	[more]
A0A059APK6_EUCGR	1.5e-99	63.52	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01480 PE=4 SV=1	[more]
M5VI16_PRUPE	4.8e-98	63.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026873mg PE=4 SV=1	[more]
W9RTN2_9ROSA	1.1e-97	61.15	Uncharacterized protein OS=Morus notabilis GN=L484_014344 PE=4 SV=1	[more]
A0A0S3SE81_PHAAN	4.5e-96	62.07	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G245200 PE=...	[more]

BLAST of Lsi11G012450 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41990.1	9.4e-69	50.32	Late embryogenesis abundant protein, group 2 (InterPro:IPR004864)	[more]
AT4G35170.1	7.4e-58	48.01	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G45688.1	2.8e-57	43.86	unknown protein	[more]
AT5G42860.1	1.3e-49	40.76	unknown protein	[more]
AT3G24600.1	4.9e-25	33.07	Late embryogenesis abundant protein, group 2	[more]

BLAST of Lsi11G012450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094124\|ref\|XP_008447896.1\|	4.0e-162	93.97	PREDICTED: uncharacterized protein LOC103490245 [Cucumis melo]	[more]
gi\|449454263\|ref\|XP_004144875.1\|	1.9e-159	92.70	PREDICTED: uncharacterized protein LOC101215215 [Cucumis sativus]	[more]
gi\|702464018\|ref\|XP_010028799.1\|	2.2e-99	63.52	PREDICTED: uncharacterized protein LOC104419000 [Eucalyptus grandis]	[more]
gi\|645261030\|ref\|XP_008236099.1\|	3.1e-98	63.81	PREDICTED: uncharacterized protein LOC103334887 [Prunus mume]	[more]
gi\|595791409\|ref\|XP_007199453.1\|	6.9e-98	63.64	hypothetical protein PRUPE_ppa026873mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G012450.1	Lsi11G012450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 185..292 score: 5.7
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 2..313 score: 2.2E
None	No IPR available	PANTHER	PTHR31852:SF8	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 2..313 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G012450	Csa7G018790	Cucumber (Chinese Long) v2	culsiB494
Lsi11G012450	CSPI07G01380	Wild cucumber (PI 183967)	cpilsiB506
Lsi11G012450	Cucsa.099270	Cucumber (Gy14) v1	cgylsiB122
Lsi11G012450	CmaCh11G013540	Cucurbita maxima (Rimu)	cmalsiB100
Lsi11G012450	CmaCh19G007700	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G012450	CmoCh11G017650	Cucurbita moschata (Rifu)	cmolsiB080
Lsi11G012450	CmoCh19G007830	Cucurbita moschata (Rifu)	cmolsiB457
Lsi11G012450	Cla015784	Watermelon (97103) v1	lsiwmB106
Lsi11G012450	MELO3C013305	Melon (DHL92) v3.5.1	lsimeB096
Lsi11G012450	ClCG02G003670	Watermelon (Charleston Gray)	lsiwcgB097
Lsi11G012450	MELO3C013305.2	Melon (DHL92) v3.6.1	lsimedB102
Lsi11G012450	Bhi05G001407	Wax gourd	lsiwgoB118
Lsi11G012450	Cp4.1LG04g04690	Cucurbita pepo (Zucchini)	cpelsiB526
Lsi11G012450	Cp4.1LG15g06150	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G012450	CsGy7G001230	Cucumber (Gy14) v2	cgyblsiB462
Lsi11G012450	Carg26366	Silver-seed gourd	carlsiB956
Lsi11G012450	Carg05214	Silver-seed gourd	carlsiB740
Lsi11G012450	Carg25747	Silver-seed gourd	carlsiB971
Lsi11G012450	CsaV3_7G001460	Cucumber (Chinese Long) v3	cuclsiB529

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G012450	Silver-seed gourd	carlsiB316
Lsi11G012450	Watermelon (97103) v2	lsiwmbB086
Lsi11G012450	Bottle gourd (USVL1VR-Ls)	lsilsiB054
Lsi11G012450	Cucurbita maxima (Rimu)	cmalsiB558
Lsi11G012450	Cucurbita moschata (Rifu)	cmolsiB542
Lsi11G012450	Cucurbita pepo (Zucchini)	cpelsiB232
Lsi11G012450	Cucurbita pepo (Zucchini)	cpelsiB607
Lsi11G012450	Watermelon (Charleston Gray)	lsiwcgB102