Lsi10G006670.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G006670.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	RPM1-interacting protein 4 (RIN4) family protein
Location	chr10 : 9274272 .. 9278621 (-)
Sequence length	589

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTCTGTTTAGTTATATTGAGTAGTTTAGATTTCGATTTGACATTGTGTTAGTAGCAAATTGTGATAGTATTATGATTGGTGCATCTTGAGCACACTGCAAAGAAACTTAGAAGATCAAATAGAAGGAGGAAATTGTTATATTGCAGACTGTGGTTGAACAAGTGGGAAGACAGCAAAAATATGAGTGCAACCCACGATGCACTCAAATATTTTTTTTTTTTATGATTTGAATTTGGAATAATGTATTAAAAATGATTTGGAGTGGTGGTTTAAATTATGAAATAGAGAATGAACTTTTGATGCAGAAAGTGGCTCCATGGATGAGTGTTCCACAATTTGGGGATTGGGAACAGAAGGGAGAAGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAATAGAAAACAACACAAAAGGGATTTGTCAAGGGCTAGCATTGGGAATGAAGAGGAGCTAATGGCCTCATCAGCCACTCCCACCACAAACACACCTCATTCCCATGCTGATGAAAATCATCAACTCAATCCCACCAACAGCAACTCCCCAACGGTCAGATTCCTTTCTCTCATTGCCTTTCTTTTCTTTTTTTTCTTCTTTTTTTTTTCTTCCAGCTTTTACTTTACGCATGTCTCCTTTTTCTTCGTGTGTGGGCATGCATGTGATAAAACTGACCCCGCCCCTCAATAATTTATTCAAGGAAAAAATAACATAAAGATGAATCCTTAATGCCACTTGGTCTAAAAGTTTTTTTCAAGTTGAAATCCTTCTCTTACTTCATACTTTTGAGTTTTGACTAGGAAAGAGAAAATAAAAGAAAAAACCAACAAAATAATGAAAAAAACGCACTTCAATGTTCAGGTCAATATTGAGTTTGTGAGTAGCATGATAATAGAAAATAATAGTATAGTGTTTTCAGTATACCTTTGACGAATGACCTACGTCATTTATATATATAGATCTTTAGTTTTATGTAAATAATGGCCATACTTTTATTGCCTTCCTTGTAATTCTTTAAACAGTCGAGTTATTACTCATATGGTTGCACTACCATGAGTCCTACAAAAGTCCTCTATGGATTGCGGGGTCCTTCATGGGTCCTAGAGAGATCCTCCAAGGTTCTCAATCGGATTGTAGGGTCTTTCATGTTTTTGGTCCATTCTCTTGGATCGGCTTCTTAAGGCCATGACTGGCTATGGGTAGGACATAGGTCCTATTGACTTTGGATTAGCCATTTCGAATTTTTTATCTTTGTCCTTGGGTCTCCTATTTCTACAATTTTCAGTCTTGTCTCATCTCTGTAAATCTACCCCCATAACATATCACATTACCAGAGAATTGAAACCTATGACCAAGGAAACAAAGTCGAAAATCTAGCCGGTTAACAATCTATCACCCTAACTTTTAATTCATTTGATTTATATTCAGCATGGCCGGACTTAAATGATACATTCCCGACTTCCTAAATTTAGATGAACCATTTCCCAAACACTTTTATCTAGTTTATCTTAAAGGAGAGGAATTGACTGTTCAGGATATGAATAATATTGGGAAACTATTACAGAACAATTATTAACTCACATTCTCCTTTTCTTTTAAAAATAATAATAATAAAAATAAGAAAGAAAAAAACTCTACTGGCTGGCAAGTGCCATGATGGGGATTTGTGTTTTGTCTAGGGAAAGCAAATTACCGTGTTCAAAATCGATTGGAGTAGTGGTCCTTCTACAATATAAGTTTAAATAATATTTTGGTCAAATATGTTTTATTTTTGTTTTAAACGTTCAAAATTAAAAAAAAAAACTATATAAACATATATATTCTTTTTTGTTTGGAGATGTCAAAATATTTATTTTGATTTTAAGGCTCCATTTTGAAAAAATTTCACTCGGTGATAGACCACTTTCTATATTTGTAAATAGTTTGACTCATTTTTTTATATTCGAAAATAGCGCTATTTTTGGGAAATTTTGCAATTATAATTTTTTAAAAAAAACACTTGAATTTCTTATCCAATTCTAAAAATAAAAATTACTTTTTTGAAAACTACTTTTTATTATTATTATTATGTGTAGGAAAAGTGTTTATGAGCCTAAATTTTGAAAACAAAAAATTAAATAAATATTGAACAAGACCTAAATTTTCTAATTTGTCATATTTTTGTCTCAACTTTAAAAAATTTAGTTTAGTCCTTCCACTTAAAAAAGTTTTTTAAGGATTTTGATTCTTAAGTATGCCTATTAGTATGTTAATAAAATCATCCTTTCGAGTCATATAGATTATAGACAAGTATATAGCAAGTGAATATCATATAAAAATAATATAGCAAGGATCAAGATTGTTATTTTGTAAATTTTAGAAAAGAAAAAAAAGACATTTTGAAAGTTTAAGGACCAAAATGGAACAATATCAAAAGCTTGAAGTTTTAAATTAACAATGTAAAAGTTTAGGGACAAAGTAGAATAAACTTGAAATATATTAATTTTTTTAAAAAAATTGAAATATATTATATTATCCATATTTTTTTTACAAAAATAAATTAAGTTTATAACATGAAAATACTGATTTATCAAATTATCGTTCTTTTTAATATAATCGTGCATTTTAAAATTTCAAATCTAAATCTATATACACTGGAAACATAAAGTGGTTAGTTTTTTAGTTTTCAAACAATATTTGGATTGTAGTATTCAGAAATAGTTTTCAAAAATAAATTTGTCAAAACATATTTTCGTAAAACTTGTGAATAAAAAAAGTAAAACAGAATTGAGATTGCATGTCAAAATATGCCCTAAATTGTTATAGTAAATACATATGTTAATTATAGACATGGAGCATACTGGAATATCTTTTAAAAAAAAAAAAACTTAAAATTATTCTCCAACTTTATCAAGAGCTATAAACTCAAAATTCATAATAGAACATGTTGTACACATTTGTTTTAAAGATCATTTCCATGGTATAAGTGCTCTACTTAAATTAAAGATATACTCACTCATTGATTTATTTTTCATGTAACCATAAATCTAATTAGCATAACTAAATTCTTTTAGTGCATGGAGATACCTCGTACAATGCGACTTATAGTCTGCATTTTAGGTGCAGAATATTTTAGTCTGTGTTATAATAGTTTTGGGGTGCATACTATTTTAGTCTTTGTAAGAAATTGTAAACACGGTAACAAATAGGGAAAGAAAGCATGAATACGATATAATAAACAATGTAACAAAGAGGAAAAGAAAGCATGAGTAGGAAATAGTAAACACAACAACAAATAACAAACACGGTACTAAAGAGGGATTTGAAATAGTAATAATGTAGTTAATTGTAGGTTGTAATAGCTGGAAACACCAACTATTATAATTAGAGCCCCAAATATGGAGTGGATTATAATAGCCTACTCCACCCACTTGATGTTGGGAGCTAAACACCTTAAATATACCCGAATGTAATTTGAAATTCAACTGTAACTTAATTATCATGGATTTTTATAGATAGTAATTTGATGTTGATACATAATCTACTACCATTACATAATCACAGCCATTTAGTGGAATCATATAATAAGATTGTGTTTTTGTTATCATTCATACAAAATGCTTTAATTAAATAGTACAATTTCTGTTTGCTTAATACCCTCTCTTTTATGATAAAGGAGTCAGTGTCACAAAACAATCTTCATGAAAGAGGAAGATAGATAATACCAATAACAATTGTTAAATAAATATATGGTGTTCTTATCCATATTTCTAAAGAAGTATCCTTGAACTTAACAATATATATTATATATTGATCAAACTATAAATTAGAAAAATAAATAAACAAATAAAATTATAAAATGATGCTTAAACTATAATAATAATAATTGTTGAATTGAAGTTATTGATTTATGTATAAGAATTCAAATATTTCTTTATGTTATTGTTGAGTATATTTATTGATTTTTTTAAAAAAGATATATTGAAAGTTGTACCTTACAACTTTTTCTTGTATGGTTTTTCTTTTCAGAGAAGGAAGAGCATATTGAGCTACTTCAACTGTTGTGTGAAAGCATGATCACAAACTCAAATTCACCAATATTGTTGATTAATGAAGTGATGGTTTCTCTCAAGGTTTTTTTTTCACATTTGGTTTGTAAGTTGTTATAAGAACATAAGAAACTCCTTTAATTGAAGTTAGATAAATATGTAATCTTCTTTATATCTTTCTCCCAACCCAGTTGTTAATTTACAAAATAAAAAATAAAAAAGGAATGTTTTTCTAAAACTTTTGCAGGTATGTATTTTTAATGTGTTAAAGGTAGAGAAATTTTCACAGATAGAAAAAATTTCAAACTATTTAC

mRNA sequence

ATGGAGAAAGTGGCTCCATGGATGAGTGTTCCACAATTTGGGGATTGGGAACAGAAGGGAGAAGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAATAGAAAACAACACAAAAGGGATTTGTCAAGGGCTAGCATTGGGAATGAAGAGGAGCTAATGGCCTCATCAGCCACTCCCACCACAAACACACCTCATTCCCATGCTGATGAAAATCATCAACTCAATCCCACCAACAGCAACTCCCCAACGAGAAGGAAGAGCATATTGAGCTACTTCAACTGTTGTGTGAAAGCATGATCACAAACTCAAATTCACCAATATTGTTGATTAATGAAGTGATGGTTTCTCTCAAGGTTTTTTTTTCACATTTGGTTTGTAAGTTGTTATAAGAACATAAGAAACTCCTTTAATTGAAGTTAGATAAATATGTAATCTTCTTTATATCTTTCTCCCAACCCAGTTGTTAATTTACAAAATAAAAAATAAAAAAGGAATGTTTTTCTAAAACTTTTGCAGGTATGTATTTTTAATGTGTTAAAGGTAGAGAAATTTTCACAGATAGAAAAAATTTCAAACTATTTAC

Coding sequence (CDS)

ATGGAGAAAGTGGCTCCATGGATGAGTGTTCCACAATTTGGGGATTGGGAACAGAAGGGAGAAGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAATAGAAAACAACACAAAAGGGATTTGTCAAGGGCTAGCATTGGGAATGAAGAGGAGCTAATGGCCTCATCAGCCACTCCCACCACAAACACACCTCATTCCCATGCTGATGAAAATCATCAACTCAATCCCACCAACAGCAACTCCCCAACGAGAAGGAAGAGCATATTGAGCTACTTCAACTGTTGTGTGAAAGCATGA

Protein sequence

MEKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA

Homology

[Close]

BLAST of Lsi10G006670.1 vs. TrEMBL
Match: A0A0A0LJN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G297140 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.7e-47
Identity = 95/99 (95.96%), Postives = 95/99 (95.96%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EKVAPWMSVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP
Sbjct: 6   EKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
           TTNTPHSH DENHQLNPTNSNSPT RKSIL YFNCCVKA
Sbjct: 66  TTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 104

[Close]

BLAST of Lsi10G006670.1 vs. TrEMBL
Match: A0A0S3REV7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G193100 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-29
Identity = 67/99 (67.68%), Postives = 81/99 (81.82%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EK APW+SVPQFGDW+QKG+VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMASS   
Sbjct: 6   EKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSTNN 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
           TTNT HS   ++   +   ++SPT R+S LSYFNCCVKA
Sbjct: 66  TTNTVHSDEHQHQHPHYHQTSSPTTRRSFLSYFNCCVKA 104

[Close]

BLAST of Lsi10G006670.1 vs. TrEMBL
Match: V7AZC3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G139200g PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-29
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EK APW+SVPQFGDW+QKG+VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMASS T 
Sbjct: 6   EKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSTTN 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
            TNT HS  DE+   +   ++SPT R+S LSYFNCCVKA
Sbjct: 66  NTNTVHS--DEHQHPHYHQTSSPTTRRSFLSYFNCCVKA 102

[Close]

BLAST of Lsi10G006670.1 vs. TrEMBL
Match: I1KBC1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G146800 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-29
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EK APW+SVPQFGDW+QKG+VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMASSAT 
Sbjct: 6   EKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSATN 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
            T+T HS  D++   +   +NSPT R+S LSYFNCC+KA
Sbjct: 66  NTSTVHS--DDHQHPHYHQTNSPTTRRSFLSYFNCCIKA 102

[Close]

BLAST of Lsi10G006670.1 vs. TrEMBL
Match: A0A0B2PPG0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_011827 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-29
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EK APW+SVPQFGDW+QKG+VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMASSAT 
Sbjct: 6   EKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSATN 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
            T+T HS  D++   +   +NSPT R+S LSYFNCC+KA
Sbjct: 66  NTSTVHS--DDHQHPHYHQTNSPTTRRSFLSYFNCCIKA 102

[Close]

BLAST of Lsi10G006670.1 vs. TAIR10
Match: AT5G09960.1 (AT5G09960.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-23
Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKG--EVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM--AS 61
           EK  PW+SVPQFGDW+QKG   +PDYS+DF+KIRE RKQ+KRD SRAS+GNEEEL+    
Sbjct: 7   EKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPPE 66

Query: 62  SATPTTNTPHSHADENHQLNPTN---SNSPTRRKSILSYFNCCVKA 101
           SAT T       ++   + +P++    +SP+ R+S+ S FNCCVKA
Sbjct: 67  SATSTAELTTVQSENQREFSPSHHHQPHSPSTRRSMFSCFNCCVKA 112

[Close]

BLAST of Lsi10G006670.1 vs. TAIR10
Match: AT5G64850.1 (AT5G64850.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22
Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 1


Query: 3   KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM------- 62
           K +PW+SVPQFGDW+QKG   DYS+DFSKIRE RK +KRD SRAS+GNEEEL+       
Sbjct: 8   KNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELINPFHDQP 67

Query: 63  -ASSATP-TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
              +A P    T HS  +  ++ +  + +SP+RR+ I S FNCCVKA
Sbjct: 68  PVDTAKPKKLTTVHSDNNNRNEFSHHHPHSPSRRRRIFSCFNCCVKA 114

[Close]

BLAST of Lsi10G006670.1 vs. TAIR10
Match: AT5G19473.1 (AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-13
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 1


Query: 5   APWMSVPQFGDWEQKG--EVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 64
           A W  VPQFG W+QKG  +  +YSV FSK R NRKQ+K  +  +S+G+E+ELM S     
Sbjct: 8   AAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMVS----- 67

Query: 65  TNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVK 100
                +H   +H+    + +   ++K IL+Y NCC++
Sbjct: 68  --VRRNHQQLHHRHETQDDDPVMKKKRILTYINCCIR 97

[Close]

BLAST of Lsi10G006670.1 vs. NCBI nr
Match: gi|449461437|ref|XP_004148448.1| (PREDICTED: uncharacterized protein LOC101211284 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 6.7e-47
Identity = 95/99 (95.96%), Postives = 95/99 (95.96%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EKVAPWMSVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP
Sbjct: 6   EKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
           TTNTPHSH DENHQLNPTNSNSPT RKSIL YFNCCVKA
Sbjct: 66  TTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 104

[Close]

BLAST of Lsi10G006670.1 vs. NCBI nr
Match: gi|659116098|ref|XP_008457901.1| (PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo])

HSP 1 Score: 188.7 bits (478), Expect = 4.8e-45
Identity = 93/99 (93.94%), Postives = 93/99 (93.94%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASS TP
Sbjct: 6   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSVTP 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
           TTNTPHS  DEN QLNPTNSNSPT RKSIL YFNCCVKA
Sbjct: 66  TTNTPHSIVDENRQLNPTNSNSPTTRKSILRYFNCCVKA 104

[Close]

BLAST of Lsi10G006670.1 vs. NCBI nr
Match: gi|951069079|ref|XP_014490030.1| (PREDICTED: uncharacterized protein LOC106752778 [Vigna radiata var. radiata])

HSP 1 Score: 138.3 bits (347), Expect = 7.5e-30
Identity = 70/99 (70.71%), Postives = 83/99 (83.84%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EK APW+SVPQFGDW+QKG+VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMASS T 
Sbjct: 6   EKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSTTN 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
           TTNT HS  DE+   +   ++SPT R+S LSYFNCCVKA
Sbjct: 66  TTNTVHS--DEHQHPHYHQTSSPTTRRSFLSYFNCCVKA 102

[Close]

BLAST of Lsi10G006670.1 vs. NCBI nr
Match: gi|920697640|gb|KOM40865.1| (hypothetical protein LR48_Vigan04g106300 [Vigna angularis])

HSP 1 Score: 136.3 bits (342), Expect = 2.8e-29
Identity = 67/99 (67.68%), Postives = 81/99 (81.82%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EK APW+SVPQFGDW+QKG+VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMASS   
Sbjct: 6   EKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSTNN 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
           TTNT HS   ++   +   ++SPT R+S LSYFNCCVKA
Sbjct: 66  TTNTVHSDEHQHQHPHYHQTSSPTTRRSFLSYFNCCVKA 104

[Close]

BLAST of Lsi10G006670.1 vs. NCBI nr
Match: gi|593328330|ref|XP_007137592.1| (hypothetical protein PHAVU_009G139200g [Phaseolus vulgaris])

HSP 1 Score: 136.3 bits (342), Expect = 2.8e-29
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 2   EKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATP 61
           EK APW+SVPQFGDW+QKG+VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMASS T 
Sbjct: 6   EKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSTTN 65

Query: 62  TTNTPHSHADENHQLNPTNSNSPTRRKSILSYFNCCVKA 101
            TNT HS  DE+   +   ++SPT R+S LSYFNCCVKA
Sbjct: 66  NTNTVHS--DEHQHPHYHQTSSPTTRRSFLSYFNCCVKA 102

The following BLAST results are available for this feature:

BLAST of Lsi10G006670.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G006670.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJN9_CUCSA	4.7e-47	95.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G297140 PE=4 SV=1	[more]
A0A0S3REV7_PHAAN	2.0e-29	67.68	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G193100 PE=...	[more]
V7AZC3_PHAVU	2.0e-29	69.70	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G139200g PE=4 SV=1	[more]
I1KBC1_SOYBN	2.0e-29	68.69	Uncharacterized protein OS=Glycine max GN=GLYMA_06G146800 PE=4 SV=1	[more]
A0A0B2PPG0_GLYSO	2.0e-29	68.69	Uncharacterized protein OS=Glycine soja GN=glysoja_011827 PE=4 SV=1	[more]

BLAST of Lsi10G006670.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G09960.1	1.1e-23	54.72	FUNCTIONS IN: molecular_function unknown	[more]
AT5G64850.1	1.2e-22	53.27	FUNCTIONS IN: molecular_function unknown	[more]
AT5G19473.1	1.4e-13	40.21	RPM1-interacting protein 4 (RIN4) family protein	[more]

BLAST of Lsi10G006670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461437\|ref\|XP_004148448.1\|	6.7e-47	95.96	PREDICTED: uncharacterized protein LOC101211284 [Cucumis sativus]	[more]
gi\|659116098\|ref\|XP_008457901.1\|	4.8e-45	93.94	PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo]	[more]
gi\|951069079\|ref\|XP_014490030.1\|	7.5e-30	70.71	PREDICTED: uncharacterized protein LOC106752778 [Vigna radiata var. radiata]	[more]
gi\|920697640\|gb\|KOM40865.1\|	2.8e-29	67.68	hypothetical protein LR48_Vigan04g106300 [Vigna angularis]	[more]
gi\|593328330\|ref\|XP_007137592.1\|	2.8e-29	69.70	hypothetical protein PHAVU_009G139200g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi10G006670	Lsi10G006670	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G006670.1.three_prime_UTR.1	Lsi10G006670.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G006670.1.CDS.3	Lsi10G006670.1.CDS.3	CDS
Lsi10G006670.1.CDS.2	Lsi10G006670.1.CDS.2	CDS
Lsi10G006670.1.CDS.1	Lsi10G006670.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi10G006670.1	Lsi10G006670.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33882	FAMILY NOT NAMED	coord: 2..100 score: 4.5