Lsi10G006080.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi10G006080.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 8640774 .. 8642170 (+)
Sequence length213
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCCGTATACTCAAAATCAATAAAAAATTTCATTAAATAAATATGTGTATCTAGGGGTAATTCACTTTGAAGCAATATAACCTCAGCTCTATTTATCGGTCTGAACAAGATACGACTTATTTGATTCAAATTAATTGAATGCACAATTCAAAAAAAGAAACATTTCGGTGGTATTCCATATATTCTATATATTGTAGAGTTCTTTACCTTGTCAATTCAATTTCCAATTCTTGGTCATTGAGATTCATGGGCAATATCAATTAATATTTTAAGGATAGATATTACCTCTCCTTTTCCTCGTTCAACTAAATTGAAATGATTGAAGTTTTTCTATTTGGAATCGTATTGGGTCTAATTCCTATTGCTTTAGCTGGATTATTTGTGACCGCATATTTACAATACAGACGGGGGGATCAGTTGGACCTTTTTTTTTATTGACCTCCTACTTGCTTTATAGGAGGTCAAATTTTGATTTCTGTTAAATTGTTTCAGTATAATTTTCCATCTAACAACAAGAAAAATCGAATCACGCTCTATAGGATTTGAACCTACGACATCGGATTTTGGAGACCCGCGTTCTACCGAACTGAACTAAGAGCGTTTGATTATCAAACTAAATGCAACCCGAATATATCTTCTATACATATATTATCATATAGAATATCATAAAATGAAATAAAAAAAAGATTGATTCGGTATATGTATGTTCAATTTTGATGGATCTCAATTGATTCCTCGTTACTGTTCAGAAGATAAGTAATAGGTAGGGATGACAGGATTGGAACTCGTGACATTTTGTACCCAAAACAAACGCGCTACCAAGCTGCACTACATCCCTTTCAATTGGTCTACAGTGTCATTGTAGAGAATCCCTGTCTTGTTTTCCACATTTTTTATTTATTTCCTCCATTGGTATACACAAATTATCTTGCCATTTCTTCTTTTTTGTCTCATATCATATATAAAATATAATAAAAAGACTTATATACGTAATAAATAATAAATATGAAATCCGCCGTAAAGAAAAATCAATATTTGTTGGGGTGGGGCCAAAAGCGACATATTTTTTTTAATTGGAATATCTACCGAATTGAATTGTTGTACATTTCAATTTGAATTAGGAATTCCGCAGACAATACAAGCGGTTATTAACTATATATACATTTGATGGTATGTAATACCATTATGTATTACAAATTACTCTAAAGTAGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCGGGGCTTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTGCATCATTCTAGTTATTGACTTGGGAAGGGGTGAAGAAAATTAG

mRNA sequence

ATGGAATCCGAATTCCGCAGACAATACAAGCGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCGGGGCTTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTGCATCATTCTAGTTATTGACTTGGGAAGGGGTGAAGAAAATTAG

Coding sequence (CDS)

ATGGAATCCGAATTCCGCAGACAATACAAGCGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCGGGGCTTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTGCATCATTCTAGTTATTGACTTGGGAAGGGGTGAAGAAAATTAG

Protein sequence

MESEFRRQYKRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILVIDLGRGEEN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi10G006080Lsi10G006080gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi10G006080.1.CDS.1Lsi10G006080.1.CDS.1CDS
Lsi10G006080.1.CDS.2Lsi10G006080.1.CDS.2CDS
Lsi10G006080.1.CDS.3Lsi10G006080.1.CDS.3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi10G006080.1Lsi10G006080.1-proteinpolypeptide