Lsi10G006080 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G006080
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 8640774 .. 8642170 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCCGTATACTCAAAATCAATAAAAAATTTCATTAAATAAATATGTGTATCTAGGGGTAATTCACTTTGAAGCAATATAACCTCAGCTCTATTTATCGGTCTGAACAAGATACGACTTATTTGATTCAAATTAATTGAATGCACAATTCAAAAAAAGAAACATTTCGGTGGTATTCCATATATTCTATATATTGTAGAGTTCTTTACCTTGTCAATTCAATTTCCAATTCTTGGTCATTGAGATTCATGGGCAATATCAATTAATATTTTAAGGATAGATATTACCTCTCCTTTTCCTCGTTCAACTAAATTGAAATGATTGAAGTTTTTCTATTTGGAATCGTATTGGGTCTAATTCCTATTGCTTTAGCTGGATTATTTGTGACCGCATATTTACAATACAGACGGGGGGATCAGTTGGACCTTTTTTTTTATTGACCTCCTACTTGCTTTATAGGAGGTCAAATTTTGATTTCTGTTAAATTGTTTCAGTATAATTTTCCATCTAACAACAAGAAAAATCGAATCACGCTCTATAGGATTTGAACCTACGACATCGGATTTTGGAGACCCGCGTTCTACCGAACTGAACTAAGAGCGTTTGATTATCAAACTAAATGCAACCCGAATATATCTTCTATACATATATTATCATATAGAATATCATAAAATGAAATAAAAAAAAGATTGATTCGGTATATGTATGTTCAATTTTGATGGATCTCAATTGATTCCTCGTTACTGTTCAGAAGATAAGTAATAGGTAGGGATGACAGGATTGGAACTCGTGACATTTTGTACCCAAAACAAACGCGCTACCAAGCTGCACTACATCCCTTTCAATTGGTCTACAGTGTCATTGTAGAGAATCCCTGTCTTGTTTTCCACATTTTTTATTTATTTCCTCCATTGGTATACACAAATTATCTTGCCATTTCTTCTTTTTTGTCTCATATCATATATAAAATATAATAAAAAGACTTATATACGTAATAAATAATAAATATGAAATCCGCCGTAAAGAAAAATCAATATTTGTTGGGGTGGGGCCAAAAGCGACATATTTTTTTTAATTGGAATATCTACCGAATTGAATTGTTGTACATTTCAATTTGAATTAGGAATTCCGCAGACAATACAAGCGGTTATTAACTATATATACATTTGATGGTATGTAATACCATTATGTATTACAAATTACTCTAAAGTAGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCGGGGCTTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTGCATCATTCTAGTTATTGACTTGGGAAGGGGTGAAGAAAATTAG

mRNA sequence

ATGGAATCCGAATTCCGCAGACAATACAAGCGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCGGGGCTTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTGCATCATTCTAGTTATTGACTTGGGAAGGGGTGAAGAAAATTAG

Coding sequence (CDS)

ATGGAATCCGAATTCCGCAGACAATACAAGCGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCGGGGCTTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTGCATCATTCTAGTTATTGACTTGGGAAGGGGTGAAGAAAATTAG

Protein sequence

MESEFRRQYKRRVLNARSKNISLRGTGSKYYMVRGFSGSINRDQSFIPGCVGIPIFCIILVIDLGRGEEN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G006080.1Lsi10G006080.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G006080Cucumber (Gy14) v1cgylsiB594
Lsi10G006080Cucurbita maxima (Rimu)cmalsiB508
Lsi10G006080Wild cucumber (PI 183967)cpilsiB091
Lsi10G006080Cucumber (Chinese Long) v2culsiB093
Lsi10G006080Melon (DHL92) v3.5.1lsimeB054
Lsi10G006080Cucumber (Gy14) v2cgyblsiB086