Lsi10G004340.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G004340.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SAUR-like auxin-responsive protein family
Location	chr10 : 6546370 .. 6546657 (-)
Sequence length	288

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTCGTTTCGCGAAAATTGTTAATGTTGTGCATAATCTAGGACTTTCTTATCTAGCAACAAACCAAGAATCACCAATTGTCCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGTTTTGTGATTCCAATAGCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCAGTCAAGTTGAAGAGGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGATCTCATCTCTCAGTTGCATTAG

mRNA sequence

ATGGGTTTTCGTTTCGCGAAAATTGTTAATGTTGTGCATAATCTAGGACTTTCTTATCTAGCAACAAACCAAGAATCACCAATTGTCCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGTTTTGTGATTCCAATAGCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCAGTCAAGTTGAAGAGGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGATCTCATCTCTCAGTTGCATTAG

Coding sequence (CDS)

ATGGGTTTTCGTTTCGCGAAAATTGTTAATGTTGTGCATAATCTAGGACTTTCTTATCTAGCAACAAACCAAGAATCACCAATTGTCCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGTTTTGTGATTCCAATAGCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCAGTCAAGTTGAAGAGGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGATCTCATCTCTCAGTTGCATTAG

Protein sequence

MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

Homology

[Close]

BLAST of Lsi10G004340.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-22
Identity = 43/65 (66.15%), Postives = 59/65 (90.77%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQLH 96
           S+LH
Sbjct: 86 TSRLH 90

[Close]

BLAST of Lsi10G004340.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.5e-21
Identity = 42/64 (65.62%), Postives = 58/64 (90.62%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQL 95
           S+L
Sbjct: 86 TSRL 89

[Close]

BLAST of Lsi10G004340.1 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.5e-21
Identity = 43/80 (53.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 15 LGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHP 74
          LG   + +   +    KG+ AVYVGESQ+KR+++P++YL++P F+ LLS+ EEEFG++HP
Sbjct: 8  LGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHP 67

Query: 75 MGGLTIPCSDDTFIDLISQL 95
          MGGLTIPC +DTFI++ S+L
Sbjct: 68 MGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Lsi10G004340.1 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.6e-21
Identity = 52/95 (54.74%), Postives = 63/95 (66.32%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR   I         S    + ++  V KGY AVYVGE  R RFVIP++YLN+P F+D
Sbjct: 1  MGFRLPGI----RKASFSANQASSKAVDVEKGYLAVYVGEKMR-RFVIPVSYLNKPSFQD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LLSQ EEEFGY+HP GGLTIPCS+D F  + S L+
Sbjct: 61 LLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Lsi10G004340.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21
Identity = 42/63 (66.67%), Postives = 57/63 (90.48%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++PI+YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQ 94
           S+
Sbjct: 86 TSR 88

[Close]

BLAST of Lsi10G004340.1 vs. TrEMBL
Match: A0A0A0LM55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258630 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-41
Identity = 83/95 (87.37%), Postives = 85/95 (89.47%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR AKIVN VHN+GLS LATNQE  IVRKGYCAVYVGESQRKRFVIPI+YLNRPFFKD
Sbjct: 1  MGFRVAKIVNAVHNIGLSSLATNQEPSIVRKGYCAVYVGESQRKRFVIPISYLNRPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LL Q EEEFGYNHP GGLTIPCSDDTFI LIS LH
Sbjct: 61 LLCQAEEEFGYNHPTGGLTIPCSDDTFIGLISHLH 95

[Close]

BLAST of Lsi10G004340.1 vs. TrEMBL
Match: A0A0A0LIY4_CUCSA (SAUR family protein OS=Cucumis sativus GN=Csa_2G258610 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-35
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR  ++VNV+ N+ LS L T+  S  +RKGYCAVYVGE+Q+KRFVIPIAYLN PFFKD
Sbjct: 1  MGFRLGRMVNVMQNIRLSSLTTHHGSSAIRKGYCAVYVGENQKKRFVIPIAYLNEPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LLSQV EEFGYNHPMGGLTIPCS+DTF+DLIS+L+
Sbjct: 61 LLSQVGEEFGYNHPMGGLTIPCSNDTFMDLISRLN 95

[Close]

BLAST of Lsi10G004340.1 vs. TrEMBL
Match: M5VKD4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019366mg PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.3e-26
Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQ---ESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPF 60
          MGFR   I++V  NL  S   +NQ   ++  V KGY AVYVGESQ+KRFVIP++YLN P 
Sbjct: 1  MGFRLRGILHVKKNLLQSLPTSNQVHSKALDVPKGYFAVYVGESQKKRFVIPVSYLNHPS 60

Query: 61 FKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQ 94
          F+DLLSQ EEEFGY+HPMGG+TIPC++DTF+DL SQ
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGITIPCNEDTFLDLTSQ 96

[Close]

BLAST of Lsi10G004340.1 vs. TrEMBL
Match: M5W086_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013844mg PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 9.7e-26
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 1


Query: 1  MGFRFAKIVN----VVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRP 60
          MGFR   IVN    ++ +L  S    + ++  + KGY AVYVGESQ+KRFVIPI+YLN P
Sbjct: 1  MGFRLPAIVNAKRSLIRSLSSSSQTADSKTLDIPKGYLAVYVGESQKKRFVIPISYLNEP 60

Query: 61 FFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL 95
           F DLLSQ EEEFGY+HPMGG+TIPCS++TF+DL S+L
Sbjct: 61 LFLDLLSQAEEEFGYDHPMGGITIPCSENTFLDLTSRL 98

[Close]

BLAST of Lsi10G004340.1 vs. TrEMBL
Match: M5W1D5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026172mg PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-25
Identity = 62/94 (65.96%), Postives = 72/94 (76.60%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR   IVN     GL+  AT++   I  KGY AVYVGESQ+KRFV+PI+YLN P F D
Sbjct: 1  MGFRLPGIVN--SKKGLNKAATSKTLDIP-KGYFAVYVGESQKKRFVVPISYLNEPLFLD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL 95
          LLSQ EEEFGY+HPMGG+TIPCSD+TFI L S+L
Sbjct: 61 LLSQAEEEFGYDHPMGGITIPCSDETFIHLTSRL 91

[Close]

BLAST of Lsi10G004340.1 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-23
Identity = 43/65 (66.15%), Postives = 59/65 (90.77%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQLH 96
           S+LH
Sbjct: 86 TSRLH 90

[Close]

BLAST of Lsi10G004340.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.2 bits (256), Expect = 8.9e-23
Identity = 44/75 (58.67%), Postives = 60/75 (80.00%), Query Frame = 1


Query: 21 ATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTI 80
          +++  S  V KGY AVYVGE   KRFV+P++YL++P F+DLL + EEEFG++HPMGGLTI
Sbjct: 25 SSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTI 84

Query: 81 PCSDDTFIDLISQLH 96
          PCS++ FIDL S+ +
Sbjct: 85 PCSEEIFIDLASRFN 99

[Close]

BLAST of Lsi10G004340.1 vs. TAIR10
Match: AT4G38825.1 (AT4G38825.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22
Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ KR+++P++YLN+P F+ LLS+ E+EFG++HPMGGLTIPC  DTFI +
Sbjct: 25 KGFLAVYVGESQMKRYIVPVSYLNQPSFQALLSKSEQEFGFDHPMGGLTIPCPVDTFITV 84

Query: 91 ISQLH 96
           SQLH
Sbjct: 85 TSQLH 89

[Close]

BLAST of Lsi10G004340.1 vs. TAIR10
Match: AT3G03850.1 (AT3G03850.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-22
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1


Query: 15 LGLSYLATNQESPIVRKGYCAVYVGESQRK-RFVIPIAYLNRPFFKDLLSQVEEEFGYNH 74
          LG S + T++  P   KG+ AVYVGESQ+K R  +P++YLN+P F+DLLS+ EEEFG++H
Sbjct: 14 LGGSLVKTSKAPP---KGFLAVYVGESQKKQRHFVPVSYLNQPLFQDLLSKCEEEFGFDH 73

Query: 75 PMGGLTIPCSDDTFIDLISQL 95
          PMGGLTIPC  DTFI + SQL
Sbjct: 74 PMGGLTIPCPVDTFISITSQL 91

[Close]

BLAST of Lsi10G004340.1 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.1 bits (253), Expect = 2.0e-22
Identity = 42/64 (65.62%), Postives = 58/64 (90.62%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQL 95
           S+L
Sbjct: 86 TSRL 89

[Close]

BLAST of Lsi10G004340.1 vs. NCBI nr
Match: gi|700206748|gb|KGN61867.1| (hypothetical protein Csa_2G258630 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41
Identity = 83/95 (87.37%), Postives = 85/95 (89.47%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR AKIVN VHN+GLS LATNQE  IVRKGYCAVYVGESQRKRFVIPI+YLNRPFFKD
Sbjct: 1  MGFRVAKIVNAVHNIGLSSLATNQEPSIVRKGYCAVYVGESQRKRFVIPISYLNRPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LL Q EEEFGYNHP GGLTIPCSDDTFI LIS LH
Sbjct: 61 LLCQAEEEFGYNHPTGGLTIPCSDDTFIGLISHLH 95

[Close]

BLAST of Lsi10G004340.1 vs. NCBI nr
Match: gi|659116172|ref|XP_008457943.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 8.7e-36
Identity = 73/95 (76.84%), Postives = 82/95 (86.32%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR  ++VN V N+ LS L T+  S  +RKGYCAVYVGESQ+KRFVIPIAYLN PFFKD
Sbjct: 1  MGFRLGRMVNAVQNIRLSSLTTHHGSSAIRKGYCAVYVGESQKKRFVIPIAYLNDPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LLSQV EEFGYNHPMGGLTIPCSDDTF+DLIS+L+
Sbjct: 61 LLSQVGEEFGYNHPMGGLTIPCSDDTFMDLISRLN 95

[Close]

BLAST of Lsi10G004340.1 vs. NCBI nr
Match: gi|700206746|gb|KGN61865.1| (SAUR family protein [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 3.3e-35
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR  ++VNV+ N+ LS L T+  S  +RKGYCAVYVGE+Q+KRFVIPIAYLN PFFKD
Sbjct: 1  MGFRLGRMVNVMQNIRLSSLTTHHGSSAIRKGYCAVYVGENQKKRFVIPIAYLNEPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LLSQV EEFGYNHPMGGLTIPCS+DTF+DLIS+L+
Sbjct: 61 LLSQVGEEFGYNHPMGGLTIPCSNDTFMDLISRLN 95

[Close]

BLAST of Lsi10G004340.1 vs. NCBI nr
Match: gi|659116174|ref|XP_008457944.1| (PREDICTED: auxin-induced protein 6B-like [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 4.5e-32
Identity = 68/81 (83.95%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 15  LGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHP 74
           L LS LAT+QE  IVRKGYCAVYVGESQRKRFVIPI+YLN+PFFKDLL + EEEFGYNHP
Sbjct: 63  LSLSSLATSQEPSIVRKGYCAVYVGESQRKRFVIPISYLNQPFFKDLLCKAEEEFGYNHP 122

Query: 75  MGGLTIPCSDDTFIDLISQLH 96
           MGGLTIPCSDDTF  LIS LH
Sbjct: 123 MGGLTIPCSDDTFTCLISHLH 143

[Close]

BLAST of Lsi10G004340.1 vs. NCBI nr
Match: gi|645263019|ref|XP_008237035.1| (PREDICTED: auxin-induced protein 15A-like [Prunus mume])

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-26
Identity = 60/98 (61.22%), Postives = 76/98 (77.55%), Query Frame = 1


Query: 1  MGFRFAKIV----NVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRP 60
          MGFR   IV    +++ +L  S    + ++  + KGY AVYVGESQ+KRFVIPI+YLN P
Sbjct: 1  MGFRLPAIVKAKRSLIRSLSSSSQTADSKTSDIPKGYFAVYVGESQKKRFVIPISYLNEP 60

Query: 61 FFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL 95
           F DLLSQVEEEFGY+HPMGG+TIPCS++TF+DLIS+L
Sbjct: 61 LFLDLLSQVEEEFGYDHPMGGITIPCSENTFLDLISRL 98

The following BLAST results are available for this feature:

BLAST of Lsi10G004340.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	4.2e-22	66.15	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU24_ARATH	3.5e-21	65.63	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU21_ARATH	3.5e-21	53.75	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
AX6B_SOYBN	4.6e-21	54.74	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]
SAU20_ARATH	7.9e-21	66.67	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]

BLAST of Lsi10G004340.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM55_CUCSA	1.6e-41	87.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258630 PE=4 SV=1	[more]
A0A0A0LIY4_CUCSA	2.3e-35	74.74	SAUR family protein OS=Cucumis sativus GN=Csa_2G258610 PE=4 SV=1	[more]
M5VKD4_PRUPE	4.3e-26	63.54	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019366mg PE=4 SV=1	[more]
M5W086_PRUPE	9.7e-26	60.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013844mg PE=4 SV=1	[more]
M5W1D5_PRUPE	2.8e-25	65.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026172mg PE=4 SV=1	[more]

BLAST of Lsi10G004340.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18060.1	2.4e-23	66.15	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	8.9e-23	58.67	SAUR-like auxin-responsive protein family	[more]
AT4G38825.1	1.2e-22	66.15	SAUR-like auxin-responsive protein family	[more]
AT3G03850.1	1.5e-22	60.49	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.0e-22	65.63	SAUR-like auxin-responsive protein family	[more]

BLAST of Lsi10G004340.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206748\|gb\|KGN61867.1\|	2.4e-41	87.37	hypothetical protein Csa_2G258630 [Cucumis sativus]	[more]
gi\|659116172\|ref\|XP_008457943.1\|	8.7e-36	76.84	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206746\|gb\|KGN61865.1\|	3.3e-35	74.74	SAUR family protein [Cucumis sativus]	[more]
gi\|659116174\|ref\|XP_008457944.1\|	4.5e-32	83.95	PREDICTED: auxin-induced protein 6B-like [Cucumis melo]	[more]
gi\|645263019\|ref\|XP_008237035.1\|	3.7e-26	61.22	PREDICTED: auxin-induced protein 15A-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi10G004340	Lsi10G004340	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G004340.1.CDS.1	Lsi10G004340.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi10G004340.1	Lsi10G004340.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 23..93 score: 3.4
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..95 score: 1.1