Lsi10G004340 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G004340
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SAUR-like auxin-responsive protein family
Location	chr10 : 6546370 .. 6546657 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTCGTTTCGCGAAAATTGTTAATGTTGTGCATAATCTAGGACTTTCTTATCTAGCAACAAACCAAGAATCACCAATTGTCCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGTTTTGTGATTCCAATAGCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCAGTCAAGTTGAAGAGGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGATCTCATCTCTCAGTTGCATTAG

mRNA sequence

ATGGGTTTTCGTTTCGCGAAAATTGTTAATGTTGTGCATAATCTAGGACTTTCTTATCTAGCAACAAACCAAGAATCACCAATTGTCCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGTTTTGTGATTCCAATAGCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCAGTCAAGTTGAAGAGGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGATCTCATCTCTCAGTTGCATTAG

Coding sequence (CDS)

ATGGGTTTTCGTTTCGCGAAAATTGTTAATGTTGTGCATAATCTAGGACTTTCTTATCTAGCAACAAACCAAGAATCACCAATTGTCCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGTTTTGTGATTCCAATAGCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCAGTCAAGTTGAAGAGGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGATCTCATCTCTCAGTTGCATTAG

Protein sequence

MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH

Homology

[Close]

BLAST of Lsi10G004340 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-22
Identity = 43/65 (66.15%), Postives = 59/65 (90.77%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQLH 96
           S+LH
Sbjct: 86 TSRLH 90

[Close]

BLAST of Lsi10G004340 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.5e-21
Identity = 42/64 (65.62%), Postives = 58/64 (90.62%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQL 95
           S+L
Sbjct: 86 TSRL 89

[Close]

BLAST of Lsi10G004340 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.5e-21
Identity = 43/80 (53.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 15 LGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHP 74
          LG   + +   +    KG+ AVYVGESQ+KR+++P++YL++P F+ LLS+ EEEFG++HP
Sbjct: 8  LGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHP 67

Query: 75 MGGLTIPCSDDTFIDLISQL 95
          MGGLTIPC +DTFI++ S+L
Sbjct: 68 MGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Lsi10G004340 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.6e-21
Identity = 52/95 (54.74%), Postives = 63/95 (66.32%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR   I         S    + ++  V KGY AVYVGE  R RFVIP++YLN+P F+D
Sbjct: 1  MGFRLPGI----RKASFSANQASSKAVDVEKGYLAVYVGEKMR-RFVIPVSYLNKPSFQD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LLSQ EEEFGY+HP GGLTIPCS+D F  + S L+
Sbjct: 61 LLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Lsi10G004340 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21
Identity = 42/63 (66.67%), Postives = 57/63 (90.48%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++PI+YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQ 94
           S+
Sbjct: 86 TSR 88

[Close]

BLAST of Lsi10G004340 vs. TrEMBL
Match: A0A0A0LM55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258630 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-41
Identity = 83/95 (87.37%), Postives = 85/95 (89.47%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR AKIVN VHN+GLS LATNQE  IVRKGYCAVYVGESQRKRFVIPI+YLNRPFFKD
Sbjct: 1  MGFRVAKIVNAVHNIGLSSLATNQEPSIVRKGYCAVYVGESQRKRFVIPISYLNRPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LL Q EEEFGYNHP GGLTIPCSDDTFI LIS LH
Sbjct: 61 LLCQAEEEFGYNHPTGGLTIPCSDDTFIGLISHLH 95

[Close]

BLAST of Lsi10G004340 vs. TrEMBL
Match: A0A0A0LIY4_CUCSA (SAUR family protein OS=Cucumis sativus GN=Csa_2G258610 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-35
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR  ++VNV+ N+ LS L T+  S  +RKGYCAVYVGE+Q+KRFVIPIAYLN PFFKD
Sbjct: 1  MGFRLGRMVNVMQNIRLSSLTTHHGSSAIRKGYCAVYVGENQKKRFVIPIAYLNEPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LLSQV EEFGYNHPMGGLTIPCS+DTF+DLIS+L+
Sbjct: 61 LLSQVGEEFGYNHPMGGLTIPCSNDTFMDLISRLN 95

[Close]

BLAST of Lsi10G004340 vs. TrEMBL
Match: M5VKD4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019366mg PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.3e-26
Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQ---ESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPF 60
          MGFR   I++V  NL  S   +NQ   ++  V KGY AVYVGESQ+KRFVIP++YLN P 
Sbjct: 1  MGFRLRGILHVKKNLLQSLPTSNQVHSKALDVPKGYFAVYVGESQKKRFVIPVSYLNHPS 60

Query: 61 FKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQ 94
          F+DLLSQ EEEFGY+HPMGG+TIPC++DTF+DL SQ
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGITIPCNEDTFLDLTSQ 96

[Close]

BLAST of Lsi10G004340 vs. TrEMBL
Match: M5W086_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013844mg PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 9.7e-26
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 1


Query: 1  MGFRFAKIVN----VVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRP 60
          MGFR   IVN    ++ +L  S    + ++  + KGY AVYVGESQ+KRFVIPI+YLN P
Sbjct: 1  MGFRLPAIVNAKRSLIRSLSSSSQTADSKTLDIPKGYLAVYVGESQKKRFVIPISYLNEP 60

Query: 61 FFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL 95
           F DLLSQ EEEFGY+HPMGG+TIPCS++TF+DL S+L
Sbjct: 61 LFLDLLSQAEEEFGYDHPMGGITIPCSENTFLDLTSRL 98

[Close]

BLAST of Lsi10G004340 vs. TrEMBL
Match: M5W1D5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026172mg PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-25
Identity = 62/94 (65.96%), Postives = 72/94 (76.60%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR   IVN     GL+  AT++   I  KGY AVYVGESQ+KRFV+PI+YLN P F D
Sbjct: 1  MGFRLPGIVN--SKKGLNKAATSKTLDIP-KGYFAVYVGESQKKRFVVPISYLNEPLFLD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL 95
          LLSQ EEEFGY+HPMGG+TIPCSD+TFI L S+L
Sbjct: 61 LLSQAEEEFGYDHPMGGITIPCSDETFIHLTSRL 91

[Close]

BLAST of Lsi10G004340 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-23
Identity = 43/65 (66.15%), Postives = 59/65 (90.77%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQLH 96
           S+LH
Sbjct: 86 TSRLH 90

[Close]

BLAST of Lsi10G004340 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.2 bits (256), Expect = 8.9e-23
Identity = 44/75 (58.67%), Postives = 60/75 (80.00%), Query Frame = 1


Query: 21 ATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTI 80
          +++  S  V KGY AVYVGE   KRFV+P++YL++P F+DLL + EEEFG++HPMGGLTI
Sbjct: 25 SSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTI 84

Query: 81 PCSDDTFIDLISQLH 96
          PCS++ FIDL S+ +
Sbjct: 85 PCSEEIFIDLASRFN 99

[Close]

BLAST of Lsi10G004340 vs. TAIR10
Match: AT4G38825.1 (AT4G38825.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22
Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ KR+++P++YLN+P F+ LLS+ E+EFG++HPMGGLTIPC  DTFI +
Sbjct: 25 KGFLAVYVGESQMKRYIVPVSYLNQPSFQALLSKSEQEFGFDHPMGGLTIPCPVDTFITV 84

Query: 91 ISQLH 96
           SQLH
Sbjct: 85 TSQLH 89

[Close]

BLAST of Lsi10G004340 vs. TAIR10
Match: AT3G03850.1 (AT3G03850.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-22
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1


Query: 15 LGLSYLATNQESPIVRKGYCAVYVGESQRK-RFVIPIAYLNRPFFKDLLSQVEEEFGYNH 74
          LG S + T++  P   KG+ AVYVGESQ+K R  +P++YLN+P F+DLLS+ EEEFG++H
Sbjct: 14 LGGSLVKTSKAPP---KGFLAVYVGESQKKQRHFVPVSYLNQPLFQDLLSKCEEEFGFDH 73

Query: 75 PMGGLTIPCSDDTFIDLISQL 95
          PMGGLTIPC  DTFI + SQL
Sbjct: 74 PMGGLTIPCPVDTFISITSQL 91

[Close]

BLAST of Lsi10G004340 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.1 bits (253), Expect = 2.0e-22
Identity = 42/64 (65.62%), Postives = 58/64 (90.62%), Query Frame = 1


Query: 31 KGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDL 90
          KG+ AVYVGESQ+KR+++P++YLN+P F+ LLS+ EEEFG++HPMGGLTIPC +DTFI++
Sbjct: 26 KGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINV 85

Query: 91 ISQL 95
           S+L
Sbjct: 86 TSRL 89

[Close]

BLAST of Lsi10G004340 vs. NCBI nr
Match: gi|700206748|gb|KGN61867.1| (hypothetical protein Csa_2G258630 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41
Identity = 83/95 (87.37%), Postives = 85/95 (89.47%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR AKIVN VHN+GLS LATNQE  IVRKGYCAVYVGESQRKRFVIPI+YLNRPFFKD
Sbjct: 1  MGFRVAKIVNAVHNIGLSSLATNQEPSIVRKGYCAVYVGESQRKRFVIPISYLNRPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LL Q EEEFGYNHP GGLTIPCSDDTFI LIS LH
Sbjct: 61 LLCQAEEEFGYNHPTGGLTIPCSDDTFIGLISHLH 95

[Close]

BLAST of Lsi10G004340 vs. NCBI nr
Match: gi|659116172|ref|XP_008457943.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 8.7e-36
Identity = 73/95 (76.84%), Postives = 82/95 (86.32%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR  ++VN V N+ LS L T+  S  +RKGYCAVYVGESQ+KRFVIPIAYLN PFFKD
Sbjct: 1  MGFRLGRMVNAVQNIRLSSLTTHHGSSAIRKGYCAVYVGESQKKRFVIPIAYLNDPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LLSQV EEFGYNHPMGGLTIPCSDDTF+DLIS+L+
Sbjct: 61 LLSQVGEEFGYNHPMGGLTIPCSDDTFMDLISRLN 95

[Close]

BLAST of Lsi10G004340 vs. NCBI nr
Match: gi|700206746|gb|KGN61865.1| (SAUR family protein [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 3.3e-35
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 1


Query: 1  MGFRFAKIVNVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKD 60
          MGFR  ++VNV+ N+ LS L T+  S  +RKGYCAVYVGE+Q+KRFVIPIAYLN PFFKD
Sbjct: 1  MGFRLGRMVNVMQNIRLSSLTTHHGSSAIRKGYCAVYVGENQKKRFVIPIAYLNEPFFKD 60

Query: 61 LLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQLH 96
          LLSQV EEFGYNHPMGGLTIPCS+DTF+DLIS+L+
Sbjct: 61 LLSQVGEEFGYNHPMGGLTIPCSNDTFMDLISRLN 95

[Close]

BLAST of Lsi10G004340 vs. NCBI nr
Match: gi|659116174|ref|XP_008457944.1| (PREDICTED: auxin-induced protein 6B-like [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 4.5e-32
Identity = 68/81 (83.95%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 15  LGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRPFFKDLLSQVEEEFGYNHP 74
           L LS LAT+QE  IVRKGYCAVYVGESQRKRFVIPI+YLN+PFFKDLL + EEEFGYNHP
Sbjct: 63  LSLSSLATSQEPSIVRKGYCAVYVGESQRKRFVIPISYLNQPFFKDLLCKAEEEFGYNHP 122

Query: 75  MGGLTIPCSDDTFIDLISQLH 96
           MGGLTIPCSDDTF  LIS LH
Sbjct: 123 MGGLTIPCSDDTFTCLISHLH 143

[Close]

BLAST of Lsi10G004340 vs. NCBI nr
Match: gi|645263019|ref|XP_008237035.1| (PREDICTED: auxin-induced protein 15A-like [Prunus mume])

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-26
Identity = 60/98 (61.22%), Postives = 76/98 (77.55%), Query Frame = 1


Query: 1  MGFRFAKIV----NVVHNLGLSYLATNQESPIVRKGYCAVYVGESQRKRFVIPIAYLNRP 60
          MGFR   IV    +++ +L  S    + ++  + KGY AVYVGESQ+KRFVIPI+YLN P
Sbjct: 1  MGFRLPAIVKAKRSLIRSLSSSSQTADSKTSDIPKGYFAVYVGESQKKRFVIPISYLNEP 60

Query: 61 FFKDLLSQVEEEFGYNHPMGGLTIPCSDDTFIDLISQL 95
           F DLLSQVEEEFGY+HPMGG+TIPCS++TF+DLIS+L
Sbjct: 61 LFLDLLSQVEEEFGYDHPMGGITIPCSENTFLDLISRL 98

The following BLAST results are available for this feature:

BLAST of Lsi10G004340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	4.2e-22	66.15	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU24_ARATH	3.5e-21	65.63	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU21_ARATH	3.5e-21	53.75	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
AX6B_SOYBN	4.6e-21	54.74	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]
SAU20_ARATH	7.9e-21	66.67	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]

BLAST of Lsi10G004340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM55_CUCSA	1.6e-41	87.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258630 PE=4 SV=1	[more]
A0A0A0LIY4_CUCSA	2.3e-35	74.74	SAUR family protein OS=Cucumis sativus GN=Csa_2G258610 PE=4 SV=1	[more]
M5VKD4_PRUPE	4.3e-26	63.54	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019366mg PE=4 SV=1	[more]
M5W086_PRUPE	9.7e-26	60.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013844mg PE=4 SV=1	[more]
M5W1D5_PRUPE	2.8e-25	65.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026172mg PE=4 SV=1	[more]

BLAST of Lsi10G004340 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18060.1	2.4e-23	66.15	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	8.9e-23	58.67	SAUR-like auxin-responsive protein family	[more]
AT4G38825.1	1.2e-22	66.15	SAUR-like auxin-responsive protein family	[more]
AT3G03850.1	1.5e-22	60.49	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.0e-22	65.63	SAUR-like auxin-responsive protein family	[more]

BLAST of Lsi10G004340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206748\|gb\|KGN61867.1\|	2.4e-41	87.37	hypothetical protein Csa_2G258630 [Cucumis sativus]	[more]
gi\|659116172\|ref\|XP_008457943.1\|	8.7e-36	76.84	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206746\|gb\|KGN61865.1\|	3.3e-35	74.74	SAUR family protein [Cucumis sativus]	[more]
gi\|659116174\|ref\|XP_008457944.1\|	4.5e-32	83.95	PREDICTED: auxin-induced protein 6B-like [Cucumis melo]	[more]
gi\|645263019\|ref\|XP_008237035.1\|	3.7e-26	61.22	PREDICTED: auxin-induced protein 15A-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004340.1	Lsi10G004340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 23..93 score: 3.4
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..95 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G004340	Cla97C02G031300	Watermelon (97103) v2	lsiwmbB056
Lsi10G004340	CsaV3_7G000660	Cucumber (Chinese Long) v3	cuclsiB524

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G004340	Cucumber (Gy14) v1	cgylsiB281
Lsi10G004340	Cucumber (Gy14) v1	cgylsiB617
Lsi10G004340	Cucurbita maxima (Rimu)	cmalsiB089
Lsi10G004340	Cucurbita maxima (Rimu)	cmalsiB466
Lsi10G004340	Cucurbita maxima (Rimu)	cmalsiB507
Lsi10G004340	Cucurbita maxima (Rimu)	cmalsiB548
Lsi10G004340	Cucurbita moschata (Rifu)	cmolsiB073
Lsi10G004340	Cucurbita moschata (Rifu)	cmolsiB451
Lsi10G004340	Cucurbita moschata (Rifu)	cmolsiB489
Lsi10G004340	Cucurbita moschata (Rifu)	cmolsiB491
Lsi10G004340	Cucurbita moschata (Rifu)	cmolsiB533
Lsi10G004340	Cucurbita pepo (Zucchini)	cpelsiB220
Lsi10G004340	Cucurbita pepo (Zucchini)	cpelsiB436
Lsi10G004340	Cucurbita pepo (Zucchini)	cpelsiB589
Lsi10G004340	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G004340	Wild cucumber (PI 183967)	cpilsiB497
Lsi10G004340	Cucumber (Chinese Long) v2	culsiB093
Lsi10G004340	Cucumber (Chinese Long) v2	culsiB489
Lsi10G004340	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G004340	Melon (DHL92) v3.5.1	lsimeB064
Lsi10G004340	Watermelon (Charleston Gray)	lsiwcgB039
Lsi10G004340	Watermelon (Charleston Gray)	lsiwcgB057
Lsi10G004340	Watermelon (97103) v1	lsiwmB079
Lsi10G004340	Watermelon (97103) v1	lsiwmB084
Lsi10G004340	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G004340	Cucumber (Gy14) v2	cgyblsiB456
Lsi10G004340	Melon (DHL92) v3.6.1	lsimedB056
Lsi10G004340	Silver-seed gourd	carlsiB390
Lsi10G004340	Silver-seed gourd	carlsiB753
Lsi10G004340	Cucumber (Chinese Long) v3	cuclsiB104
Lsi10G004340	Watermelon (97103) v2	lsiwmbB043
Lsi10G004340	Wax gourd	lsiwgoB080
Lsi10G004340	Bottle gourd (USVL1VR-Ls)	lsilsiB021