Lsi09G000670.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G000670.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Location	chr09 : 581921 .. 584019 (+)
Sequence length	1093

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGACAATGAGAAAGAGAAAAGAAGCAAGAACAAGAGTATTTTTTATATATGAAAGCTTTTTAATTGAGGAAATGGGAAAATGGGAAAAGAAGGGAAAAAGTTGCAGGGTTGGCTTTTGATGGTGAAGGGGATGGATTGAAGGCAATGAATGCCATAAGGAAGTCAAAAGAAGCTTAGCAAAGTAAGCTTTTTTTGCCTATTTTGGTTTTGTAAATTGGGAAGGGAATTTTTAACGTCCACCATTACAGGACAGCCCATGCTATATATAGCTCTCTTAACTCATAACCTGTCAACACCCTCCGACCAACGTCGTCTCCGGATTCACAATCCAATATTTTCTCTGTTTTTCCCCCAAAAATAAAATAAAAATAAAAATCCCACCAACACATTCCCCTTGATTCCCTCTCTCTTTTTCCCTCTTTCTGCAAATACCCTTCTGAATCCCCACGATTCTTCCCTCTTTCCAGGGATATTCAACCCAATTTTTTTGCTGCTTCTTTCAATGGATCATCATCAGGTAGCAAATAGAAGGTGGGTTTGTTGTTGTTGGGTTTGAAGGTGATTCAGGATCGGATTTGTGGGTGAGGTTTTGTTTTTCTCTATTTGAGTTTTTCAATCTGTTTGGGAAAAGGAGAAAAGGAAATTTTGTTTTGGGGGTGTGTTGTTTTTGTGGTGAGTATGGAACAGAAGCACATTTTTCTTTCTGCTTTGGGTGTTGGGGTTGGAGTTGGGGTGGGCCTTGGATTGAGCTCTGGACAAGCTGTTGGGAAATGGGTTGGAGGAAATGGCTCTTCTGATGAGATTACAGGGCAAAAGATTGAACAGGAGCTGATCAGGCAGCTGCTTGATGGCAAAAACAGCAATGTAACTTTTGATGAGTTTCCTTATTATCTAAGGTAATGATATGATTCTTTCTTCTATGATCTTTTAAACATGTTTCCTTTTCTTGTTAGTCAGCAGGTTGGCTGGAAAGTTTTTCTTGCTTACAGATTTTGGTTTAAGCCAGATTGTTTATGTAGTTGATCCTTGAGATAGTTGTTATTTGTGGCTCCTTCCAGATATCACACTGTTTGTATTAATCCATCAAAGCATGTAATCTTTGTTACATACCGGTTCCAAGAAATTAGAGGTTATGGTAAAACTTCGTTTAAATGGATGCGGTAGAAAGCAACGTGCGATTTGATGGTGTTTACTGAGGATTGGATTCTCATACACTTGGTTAATGGAGGAGGTGATCATGAGCTTAGAGATGATTATGTCTATGCCTTGCCTTTTTGTAAAACATTTTGATTGAGGATTTTCATGGTCCAAGTTGAAGTATCCATTTTTGTCTGTGTTGAGCTTCTGCTGTTAAAACTCTTTTAAATTTTAATTCTTCATGTGTTTACACTATTATTTCAACCACAATTGTTATTCTTCGTTGCGTCCTTAGTGATCGATAAGAAAAATCACAAAAGTAAATCAATACAATGAAGTAGTTCGTCAGAAGTACAAGAAAAAATCTACTTTGTTGTCAATTTATTTGTACTTTTTTAGTTTATGCTTTTGGATTTTATTGAGTTTCCTTCTTGTTCTTTTCTTCCTTTTTATCCATAAGATTTCAACATTCTCATGGTTTTGCAGCCTTTTAGTTAAGTCCTTGTACCAAATATTAAAAGAGAATCTTTGTAGCTTAAAGTGTTTTTATGCCCATGGATTTAAAAATCATTGGATTTTTTTTCACTGTTTAGAACTTAATCATGCCATCATTGTGAAAATTCTGGATTGTCAGAATTTTCTATGGTTCCTTCATTCATGACACTTCCAACATTACATACCCATAGTTTCATTTCTTAAATTCATATCCCTTTTCATATTTTCATGTTCTACTCTGAACTCGTCTTTCTTTGATGATAATCACAGCGAAAGGACGCGGGTGCTTTTGATGAGTGCTGCATATGTTCATTTGAAGCACAGTGATATCTCCAAGCACACCAGAAATCTTTCACCAGCAAGTCGGGCTATTTTGCTTTCAGGACCAACAGGTATAAAATATGATGCTTCTACCTCAAGTACCTTGTTGCGAACAATACTTTTCAGGGCACAACATATGATGTAA

mRNA sequence

GAGACAATGAGAAAGAGAAAAGAAGCAAGAACAAGAGTATTTTTTATATATGAAAGCTTTTTAATTGAGGAAATGGGAAAATGGGAAAAGAAGGGAAAAAGTTGCAGGGTTGGCTTTTGATGGTGAAGGGGATGGATTGAAGGCAATGAATGCCATAAGGAAGTCAAAAGAAGCTTAGCAAAGTAAGCTTTTTTTGCCTATTTTGGTTTTGTAAATTGGGAAGGGAATTTTTAACGTCCACCATTACAGGACAGCCCATGCTATATATAGCTCTCTTAACTCATAACCTGTCAACACCCTCCGACCAACGTCGTCTCCGGATTCACAATCCAATATTTTCTCTGTTTTTCCCCCAAAAATAAAATAAAAATAAAAATCCCACCAACACATTCCCCTTGATTCCCTCTCTCTTTTTCCCTCTTTCTGCAAATACCCTTCTGAATCCCCACGATTCTTCCCTCTTTCCAGGGATATTCAACCCAATTTTTTTGCTGCTTCTTTCAATGGATCATCATCAGGTAGCAAATAGAAGGTGGGTTTGTTGTTGTTGGGTTTGAAGGTGATTCAGGATCGGATTTGTGGGTGAGGTTTTGTTTTTCTCTATTTGAGTTTTTCAATCTGTTTGGGAAAAGGAGAAAAGGAAATTTTGTTTTGGGGGTGTGTTGTTTTTGTGGTGAGTATGGAACAGAAGCACATTTTTCTTTCTGCTTTGGGTGTTGGGGTTGGAGTTGGGGTGGGCCTTGGATTGAGCTCTGGACAAGCTGTTGGGAAATGGGTTGGAGGAAATGGCTCTTCTGATGAGATTACAGGGCAAAAGATTGAACAGGAGCTGATCAGGCAGCTGCTTGATGGCAAAAACAGCAATGTAACTTTTGATGAGTTTCCTTATTATCTAAGCGAAAGGACGCGGGTGCTTTTGATGAGTGCTGCATATGTTCATTTGAAGCACAGTGATATCTCCAAGCACACCAGAAATCTTTCACCAGCAAGTCGGGCTATTTTGCTTTCAGGACCAACAGGTATAAAATATGATGCTTCTACCTCAAGTACCTTGTTGCGAACAATACTTTTCAGGGCACAACATATGATGTAA

Coding sequence (CDS)

ATGGAACAGAAGCACATTTTTCTTTCTGCTTTGGGTGTTGGGGTTGGAGTTGGGGTGGGCCTTGGATTGAGCTCTGGACAAGCTGTTGGGAAATGGGTTGGAGGAAATGGCTCTTCTGATGAGATTACAGGGCAAAAGATTGAACAGGAGCTGATCAGGCAGCTGCTTGATGGCAAAAACAGCAATGTAACTTTTGATGAGTTTCCTTATTATCTAAGCGAAAGGACGCGGGTGCTTTTGATGAGTGCTGCATATGTTCATTTGAAGCACAGTGATATCTCCAAGCACACCAGAAATCTTTCACCAGCAAGTCGGGCTATTTTGCTTTCAGGACCAACAGGTATAAAATATGATGCTTCTACCTCAAGTACCTTGTTGCGAACAATACTTTTCAGGGCACAACATATGATGTAA

Protein sequence

MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKNSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPTGIKYDASTSSTLLRTILFRAQHMM

Homology

[Close]

BLAST of Lsi09G000670.1 vs. TrEMBL
Match: A0A0A0KJL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139870 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 6.0e-53
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQ IEQELIRQLLDGKN
Sbjct: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQNIEQELIRQLLDGKN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPT 114
           SNVTF EFPYYLSERTRVLLMSAAYVHLKH DISKHTRNLSPASRAILLSGPT
Sbjct: 61  SNVTFAEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPT 113

[Close]

BLAST of Lsi09G000670.1 vs. TrEMBL
Match: M5X779_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001598mg PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-45
Identity = 94/112 (83.93%), Postives = 104/112 (92.86%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSAL VGVGVGVGLGLSSGQAV KWV GN S+DE+T ++IEQEL+RQ+LDG+N
Sbjct: 1   MEQKHIFLSALSVGVGVGVGLGLSSGQAVSKWVNGNCSADEVTAEQIEQELMRQVLDGRN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTF+EFPYYL ERTR+LL SAAYVHLKHSD+SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFEEFPYYLRERTRMLLTSAAYVHLKHSDLSKHTRNLSPASRAILLSGP 112

[Close]

BLAST of Lsi09G000670.1 vs. TrEMBL
Match: B9RIQ4_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_1581520 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42
Identity = 86/112 (76.79%), Postives = 101/112 (90.18%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKH  LSAL VGVGVGVGLGL+SGQ++ +W  GNGSS+++T ++IEQEL+RQ+LDG+N
Sbjct: 1   MEQKHFLLSALSVGVGVGVGLGLASGQSMSRWGNGNGSSEDVTAEQIEQELMRQVLDGRN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTFDEFPYYLS+ TRV L SAAY+HLKHSD+SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFDEFPYYLSDITRVSLTSAAYIHLKHSDVSKHTRNLSPASRAILLSGP 112

[Close]

BLAST of Lsi09G000670.1 vs. TrEMBL
Match: A0A072UIT2_MEDTR (P-loop nucleoside triphosphate hydrolase superfamily protein OS=Medicago truncatula GN=MTR_6g033740 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-40
Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKH+FLSAL VGVG+GVGLGLSSGQAV KWVGG    DE++G++I +EL R ++DGK+
Sbjct: 1   MEQKHVFLSALSVGVGLGVGLGLSSGQAVQKWVGGIRDIDEVSGEQIVEELKRLVVDGKD 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTFDEFPYYLSE+TRVLL SAAYVHLKH + SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFDEFPYYLSEKTRVLLTSAAYVHLKHLNFSKHTRNLSPASRAILLSGP 112

[Close]

BLAST of Lsi09G000670.1 vs. TrEMBL
Match: A0A061G2D6_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_015292 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.8e-40
Identity = 86/112 (76.79%), Postives = 97/112 (86.61%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQK I LSAL VGVGVGVGLGL+SGQ V KW G + + D ITG++IEQEL+RQ++DGK 
Sbjct: 1   MEQKRILLSALSVGVGVGVGLGLASGQTVSKWAGKSSAEDGITGEQIEQELMRQVVDGKL 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTFD+FPYYLSERTRVLL SAAYV LKH+D+SKHTRNLSP SRAILLSGP
Sbjct: 61  STVTFDDFPYYLSERTRVLLTSAAYVQLKHNDVSKHTRNLSPVSRAILLSGP 112

[Close]

BLAST of Lsi09G000670.1 vs. TAIR10
Match: AT1G64110.2 (AT1G64110.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.5e-42
Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDE-ITGQKIEQELIRQLLDGK 60
           M+ K + LSALGVGVGVGVGLGL+SGQAVGKW GGN SS+  +T  K+E+E++RQ++DG+
Sbjct: 1   MDSKQMLLSALGVGVGVGVGLGLASGQAVGKWAGGNSSSNNAVTADKMEKEILRQVVDGR 60

Query: 61  NSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
            S +TFDEFPYYLSE+TRVLL SAAYVHLKH D SK+TRNLSPASRAILLSGP
Sbjct: 61  ESKITFDEFPYYLSEQTRVLLTSAAYVHLKHFDASKYTRNLSPASRAILLSGP 113

[Close]

BLAST of Lsi09G000670.1 vs. TAIR10
Match: AT4G28000.1 (AT4G28000.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-39
Identity = 79/113 (69.91%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDE-ITGQKIEQELIRQLLDGK 60
           MEQK +  SALGVGVG+G+GL  +SGQ++GKW  G+ S+++ +TG+KIEQEL+RQ++DG+
Sbjct: 1   MEQKSVLFSALGVGVGLGIGL--ASGQSLGKWANGSISAEDGLTGEKIEQELVRQIVDGR 60

Query: 61  NSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
            S+VTFDEFPYYLSE+TR+LL SAAYVHLK SDISKHTRNL+P S+AILLSGP
Sbjct: 61  ESSVTFDEFPYYLSEKTRLLLTSAAYVHLKQSDISKHTRNLAPGSKAILLSGP 111

[Close]

BLAST of Lsi09G000670.1 vs. TAIR10
Match: AT5G52882.1 (AT5G52882.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 2.9e-38
Identity = 78/113 (69.03%), Postives = 97/113 (85.84%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGS-SDEITGQKIEQELIRQLLDGK 60
           MEQK + LSALGVGVG+G+GL  +SGQ++G+W  G+GS  D +TG++IEQELIRQ++DG+
Sbjct: 1   MEQKSVLLSALGVGVGLGIGL--ASGQSLGRWANGSGSVEDGLTGEQIEQELIRQIVDGR 60

Query: 61  NSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
            S VTF+EFPY+LS+RTR LL S AYVHLK  DISKHTRNL+PAS+AILLSGP
Sbjct: 61  ESTVTFEEFPYFLSKRTRELLTSVAYVHLKEYDISKHTRNLAPASKAILLSGP 111

[Close]

BLAST of Lsi09G000670.1 vs. TAIR10
Match: AT4G24860.1 (AT4G24860.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-10
Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 1


Query: 35  GNGSSDEITGQKIEQELIRQLLDGKNSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDIS 94
           GNG    I  + I+   +     G+N  V+F  FPYYLSE T+  L+ A+Y+HLK  +  
Sbjct: 280 GNGLQSAIFREAIQAGFV----RGENMEVSFKNFPYYLSEYTKAALLYASYIHLKKKEYV 339

Query: 95  KHTRNLSPASRAILLSGPTGIK-YDASTSSTLLRTI 130
           +   +++P +  ILLSGP G + Y  + +  L R +
Sbjct: 340 QFVSDMTPMNPRILLSGPAGSEIYQETLAKALARDL 371

[Close]

BLAST of Lsi09G000670.1 vs. TAIR10
Match: AT4G02480.1 (AT4G02480.1 AAA-type ATPase family protein)

HSP 1 Score: 51.2 bits (121), Expect = 5.8e-07
Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 1


Query: 45  QKIEQELIRQLLDGKNSNVTFDEFPYYLSERTRVLLMSAAYVHLK-HSDISKHTRNLSPA 104
           Q  +  L   +L+ +N +++F+ FPYYLS  T+ +LM + YVH+   S  +    +L+ A
Sbjct: 440 QAFKDSLRGGVLNAQNIDISFENFPYYLSATTKGVLMISMYVHMNGGSKYANFATDLTTA 499

Query: 105 SRAILLSGPTG 115
              ILLSGP+G
Sbjct: 500 CPRILLSGPSG 510

[Close]

BLAST of Lsi09G000670.1 vs. NCBI nr
Match: gi|659074334|ref|XP_008437548.1| (PREDICTED: uncharacterized protein LOC103482929 [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-53
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN
Sbjct: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPT 114
           SNVTF EFPYYLSERTRVLLMSAAYVHLKH DISKHTRNLSPASRAILLSGPT
Sbjct: 61  SNVTFAEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPT 113

[Close]

BLAST of Lsi09G000670.1 vs. NCBI nr
Match: gi|778699019|ref|XP_011654642.1| (PREDICTED: uncharacterized protein LOC101216426 isoform X2 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 8.6e-53
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQ IEQELIRQLLDGKN
Sbjct: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQNIEQELIRQLLDGKN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPT 114
           SNVTF EFPYYLSERTRVLLMSAAYVHLKH DISKHTRNLSPASRAILLSGPT
Sbjct: 61  SNVTFAEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPT 113

[Close]

BLAST of Lsi09G000670.1 vs. NCBI nr
Match: gi|778699015|ref|XP_004145904.2| (PREDICTED: nuclear valosin-containing protein-like isoform X1 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 8.6e-53
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQ IEQELIRQLLDGKN
Sbjct: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQNIEQELIRQLLDGKN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPT 114
           SNVTF EFPYYLSERTRVLLMSAAYVHLKH DISKHTRNLSPASRAILLSGPT
Sbjct: 61  SNVTFAEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPT 113

[Close]

BLAST of Lsi09G000670.1 vs. NCBI nr
Match: gi|596051133|ref|XP_007220610.1| (hypothetical protein PRUPE_ppa001598mg [Prunus persica])

HSP 1 Score: 189.9 bits (481), Expect = 3.0e-45
Identity = 94/112 (83.93%), Postives = 104/112 (92.86%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSAL VGVGVGVGLGLSSGQAV KWV GN S+DE+T ++IEQEL+RQ+LDG+N
Sbjct: 1   MEQKHIFLSALSVGVGVGVGLGLSSGQAVSKWVNGNCSADEVTAEQIEQELMRQVLDGRN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTF+EFPYYL ERTR+LL SAAYVHLKHSD+SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFEEFPYYLRERTRMLLTSAAYVHLKHSDLSKHTRNLSPASRAILLSGP 112

[Close]

BLAST of Lsi09G000670.1 vs. NCBI nr
Match: gi|645258271|ref|XP_008234810.1| (PREDICTED: putative cell division cycle ATPase [Prunus mume])

HSP 1 Score: 185.3 bits (469), Expect = 7.3e-44
Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSAL VGVGVGVGLGLSSGQAV KWV GN S+DE+T ++IEQEL+RQ+L G++
Sbjct: 1   MEQKHIFLSALSVGVGVGVGLGLSSGQAVSKWVNGNCSADEVTAEQIEQELMRQVLPGRD 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTF+EFPYYL ERTR+LL SAAYVHLKHSD+SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFEEFPYYLRERTRMLLTSAAYVHLKHSDLSKHTRNLSPASRAILLSGP 112

The following BLAST results are available for this feature:

BLAST of Lsi09G000670.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G000670.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJL1_CUCSA	6.0e-53	97.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139870 PE=4 SV=1	[more]
M5X779_PRUPE	2.1e-45	83.93	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001598mg PE=4 SV=1	[more]
B9RIQ4_RICCO	4.8e-42	76.79	ATP binding protein, putative OS=Ricinus communis GN=RCOM_1581520 PE=4 SV=1	[more]
A0A072UIT2_MEDTR	2.0e-40	77.68	P-loop nucleoside triphosphate hydrolase superfamily protein OS=Medicago truncat...	[more]
A0A061G2D6_THECC	5.8e-40	76.79	P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theo...	[more]

BLAST of Lsi09G000670.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64110.2	1.5e-42	74.34	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT4G28000.1	1.2e-39	69.91	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT5G52882.1	2.9e-38	69.03	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT4G24860.1	4.3e-10	35.42	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT4G02480.1	5.8e-07	38.03	AAA-type ATPase family protein	[more]

BLAST of Lsi09G000670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074334\|ref\|XP_008437548.1\|	2.3e-53	98.23	PREDICTED: uncharacterized protein LOC103482929 [Cucumis melo]	[more]
gi\|778699019\|ref\|XP_011654642.1\|	8.6e-53	97.35	PREDICTED: uncharacterized protein LOC101216426 isoform X2 [Cucumis sativus]	[more]
gi\|778699015\|ref\|XP_004145904.2\|	8.6e-53	97.35	PREDICTED: nuclear valosin-containing protein-like isoform X1 [Cucumis sativus]	[more]
gi\|596051133\|ref\|XP_007220610.1\|	3.0e-45	83.93	hypothetical protein PRUPE_ppa001598mg [Prunus persica]	[more]
gi\|645258271\|ref\|XP_008234810.1\|	7.3e-44	82.14	PREDICTED: putative cell division cycle ATPase [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031122	cytoplasmic microtubule organization
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008568	microtubule-severing ATPase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi09G000670	Lsi09G000670	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi09G000670.1.five_prime_UTR.1	Lsi09G000670.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi09G000670.1.CDS.1	Lsi09G000670.1.CDS.1	CDS
Lsi09G000670.1.CDS.2	Lsi09G000670.1.CDS.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi09G000670.1	Lsi09G000670.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23074	AAA ATPASE	coord: 2..115 score: 2.0
None	No IPR available	PANTHER	PTHR23074:SF98	SUBFAMILY NOT NAMED	coord: 2..115 score: 2.0