Lsi09G000670 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G000670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Location	chr09 : 581921 .. 584019 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGACAATGAGAAAGAGAAAAGAAGCAAGAACAAGAGTATTTTTTATATATGAAAGCTTTTTAATTGAGGAAATGGGAAAATGGGAAAAGAAGGGAAAAAGTTGCAGGGTTGGCTTTTGATGGTGAAGGGGATGGATTGAAGGCAATGAATGCCATAAGGAAGTCAAAAGAAGCTTAGCAAAGTAAGCTTTTTTTGCCTATTTTGGTTTTGTAAATTGGGAAGGGAATTTTTAACGTCCACCATTACAGGACAGCCCATGCTATATATAGCTCTCTTAACTCATAACCTGTCAACACCCTCCGACCAACGTCGTCTCCGGATTCACAATCCAATATTTTCTCTGTTTTTCCCCCAAAAATAAAATAAAAATAAAAATCCCACCAACACATTCCCCTTGATTCCCTCTCTCTTTTTCCCTCTTTCTGCAAATACCCTTCTGAATCCCCACGATTCTTCCCTCTTTCCAGGGATATTCAACCCAATTTTTTTGCTGCTTCTTTCAATGGATCATCATCAGGTAGCAAATAGAAGGTGGGTTTGTTGTTGTTGGGTTTGAAGGTGATTCAGGATCGGATTTGTGGGTGAGGTTTTGTTTTTCTCTATTTGAGTTTTTCAATCTGTTTGGGAAAAGGAGAAAAGGAAATTTTGTTTTGGGGGTGTGTTGTTTTTGTGGTGAGTATGGAACAGAAGCACATTTTTCTTTCTGCTTTGGGTGTTGGGGTTGGAGTTGGGGTGGGCCTTGGATTGAGCTCTGGACAAGCTGTTGGGAAATGGGTTGGAGGAAATGGCTCTTCTGATGAGATTACAGGGCAAAAGATTGAACAGGAGCTGATCAGGCAGCTGCTTGATGGCAAAAACAGCAATGTAACTTTTGATGAGTTTCCTTATTATCTAAGGTAATGATATGATTCTTTCTTCTATGATCTTTTAAACATGTTTCCTTTTCTTGTTAGTCAGCAGGTTGGCTGGAAAGTTTTTCTTGCTTACAGATTTTGGTTTAAGCCAGATTGTTTATGTAGTTGATCCTTGAGATAGTTGTTATTTGTGGCTCCTTCCAGATATCACACTGTTTGTATTAATCCATCAAAGCATGTAATCTTTGTTACATACCGGTTCCAAGAAATTAGAGGTTATGGTAAAACTTCGTTTAAATGGATGCGGTAGAAAGCAACGTGCGATTTGATGGTGTTTACTGAGGATTGGATTCTCATACACTTGGTTAATGGAGGAGGTGATCATGAGCTTAGAGATGATTATGTCTATGCCTTGCCTTTTTGTAAAACATTTTGATTGAGGATTTTCATGGTCCAAGTTGAAGTATCCATTTTTGTCTGTGTTGAGCTTCTGCTGTTAAAACTCTTTTAAATTTTAATTCTTCATGTGTTTACACTATTATTTCAACCACAATTGTTATTCTTCGTTGCGTCCTTAGTGATCGATAAGAAAAATCACAAAAGTAAATCAATACAATGAAGTAGTTCGTCAGAAGTACAAGAAAAAATCTACTTTGTTGTCAATTTATTTGTACTTTTTTAGTTTATGCTTTTGGATTTTATTGAGTTTCCTTCTTGTTCTTTTCTTCCTTTTTATCCATAAGATTTCAACATTCTCATGGTTTTGCAGCCTTTTAGTTAAGTCCTTGTACCAAATATTAAAAGAGAATCTTTGTAGCTTAAAGTGTTTTTATGCCCATGGATTTAAAAATCATTGGATTTTTTTTCACTGTTTAGAACTTAATCATGCCATCATTGTGAAAATTCTGGATTGTCAGAATTTTCTATGGTTCCTTCATTCATGACACTTCCAACATTACATACCCATAGTTTCATTTCTTAAATTCATATCCCTTTTCATATTTTCATGTTCTACTCTGAACTCGTCTTTCTTTGATGATAATCACAGCGAAAGGACGCGGGTGCTTTTGATGAGTGCTGCATATGTTCATTTGAAGCACAGTGATATCTCCAAGCACACCAGAAATCTTTCACCAGCAAGTCGGGCTATTTTGCTTTCAGGACCAACAGGTATAAAATATGATGCTTCTACCTCAAGTACCTTGTTGCGAACAATACTTTTCAGGGCACAACATATGATGTAA

mRNA sequence

GAGACAATGAGAAAGAGAAAAGAAGCAAGAACAAGAGTATTTTTTATATATGAAAGCTTTTTAATTGAGGAAATGGGAAAATGGGAAAAGAAGGGAAAAAGTTGCAGGGTTGGCTTTTGATGGTGAAGGGGATGGATTGAAGGCAATGAATGCCATAAGGAAGTCAAAAGAAGCTTAGCAAAGTAAGCTTTTTTTGCCTATTTTGGTTTTGTAAATTGGGAAGGGAATTTTTAACGTCCACCATTACAGGACAGCCCATGCTATATATAGCTCTCTTAACTCATAACCTGTCAACACCCTCCGACCAACGTCGTCTCCGGATTCACAATCCAATATTTTCTCTGTTTTTCCCCCAAAAATAAAATAAAAATAAAAATCCCACCAACACATTCCCCTTGATTCCCTCTCTCTTTTTCCCTCTTTCTGCAAATACCCTTCTGAATCCCCACGATTCTTCCCTCTTTCCAGGGATATTCAACCCAATTTTTTTGCTGCTTCTTTCAATGGATCATCATCAGGTAGCAAATAGAAGGTGGGTTTGTTGTTGTTGGGTTTGAAGGTGATTCAGGATCGGATTTGTGGGTGAGGTTTTGTTTTTCTCTATTTGAGTTTTTCAATCTGTTTGGGAAAAGGAGAAAAGGAAATTTTGTTTTGGGGGTGTGTTGTTTTTGTGGTGAGTATGGAACAGAAGCACATTTTTCTTTCTGCTTTGGGTGTTGGGGTTGGAGTTGGGGTGGGCCTTGGATTGAGCTCTGGACAAGCTGTTGGGAAATGGGTTGGAGGAAATGGCTCTTCTGATGAGATTACAGGGCAAAAGATTGAACAGGAGCTGATCAGGCAGCTGCTTGATGGCAAAAACAGCAATGTAACTTTTGATGAGTTTCCTTATTATCTAAGCGAAAGGACGCGGGTGCTTTTGATGAGTGCTGCATATGTTCATTTGAAGCACAGTGATATCTCCAAGCACACCAGAAATCTTTCACCAGCAAGTCGGGCTATTTTGCTTTCAGGACCAACAGGTATAAAATATGATGCTTCTACCTCAAGTACCTTGTTGCGAACAATACTTTTCAGGGCACAACATATGATGTAA

Coding sequence (CDS)

ATGGAACAGAAGCACATTTTTCTTTCTGCTTTGGGTGTTGGGGTTGGAGTTGGGGTGGGCCTTGGATTGAGCTCTGGACAAGCTGTTGGGAAATGGGTTGGAGGAAATGGCTCTTCTGATGAGATTACAGGGCAAAAGATTGAACAGGAGCTGATCAGGCAGCTGCTTGATGGCAAAAACAGCAATGTAACTTTTGATGAGTTTCCTTATTATCTAAGCGAAAGGACGCGGGTGCTTTTGATGAGTGCTGCATATGTTCATTTGAAGCACAGTGATATCTCCAAGCACACCAGAAATCTTTCACCAGCAAGTCGGGCTATTTTGCTTTCAGGACCAACAGGTATAAAATATGATGCTTCTACCTCAAGTACCTTGTTGCGAACAATACTTTTCAGGGCACAACATATGATGTAA

Protein sequence

MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKNSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPTGIKYDASTSSTLLRTILFRAQHMM

Homology

[Close]

BLAST of Lsi09G000670 vs. TrEMBL
Match: A0A0A0KJL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139870 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 6.0e-53
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQ IEQELIRQLLDGKN
Sbjct: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQNIEQELIRQLLDGKN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPT 114
           SNVTF EFPYYLSERTRVLLMSAAYVHLKH DISKHTRNLSPASRAILLSGPT
Sbjct: 61  SNVTFAEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPT 113

[Close]

BLAST of Lsi09G000670 vs. TrEMBL
Match: M5X779_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001598mg PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-45
Identity = 94/112 (83.93%), Postives = 104/112 (92.86%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSAL VGVGVGVGLGLSSGQAV KWV GN S+DE+T ++IEQEL+RQ+LDG+N
Sbjct: 1   MEQKHIFLSALSVGVGVGVGLGLSSGQAVSKWVNGNCSADEVTAEQIEQELMRQVLDGRN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTF+EFPYYL ERTR+LL SAAYVHLKHSD+SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFEEFPYYLRERTRMLLTSAAYVHLKHSDLSKHTRNLSPASRAILLSGP 112

[Close]

BLAST of Lsi09G000670 vs. TrEMBL
Match: B9RIQ4_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_1581520 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42
Identity = 86/112 (76.79%), Postives = 101/112 (90.18%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKH  LSAL VGVGVGVGLGL+SGQ++ +W  GNGSS+++T ++IEQEL+RQ+LDG+N
Sbjct: 1   MEQKHFLLSALSVGVGVGVGLGLASGQSMSRWGNGNGSSEDVTAEQIEQELMRQVLDGRN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTFDEFPYYLS+ TRV L SAAY+HLKHSD+SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFDEFPYYLSDITRVSLTSAAYIHLKHSDVSKHTRNLSPASRAILLSGP 112

[Close]

BLAST of Lsi09G000670 vs. TrEMBL
Match: A0A072UIT2_MEDTR (P-loop nucleoside triphosphate hydrolase superfamily protein OS=Medicago truncatula GN=MTR_6g033740 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-40
Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKH+FLSAL VGVG+GVGLGLSSGQAV KWVGG    DE++G++I +EL R ++DGK+
Sbjct: 1   MEQKHVFLSALSVGVGLGVGLGLSSGQAVQKWVGGIRDIDEVSGEQIVEELKRLVVDGKD 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTFDEFPYYLSE+TRVLL SAAYVHLKH + SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFDEFPYYLSEKTRVLLTSAAYVHLKHLNFSKHTRNLSPASRAILLSGP 112

[Close]

BLAST of Lsi09G000670 vs. TrEMBL
Match: A0A061G2D6_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_015292 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.8e-40
Identity = 86/112 (76.79%), Postives = 97/112 (86.61%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQK I LSAL VGVGVGVGLGL+SGQ V KW G + + D ITG++IEQEL+RQ++DGK 
Sbjct: 1   MEQKRILLSALSVGVGVGVGLGLASGQTVSKWAGKSSAEDGITGEQIEQELMRQVVDGKL 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTFD+FPYYLSERTRVLL SAAYV LKH+D+SKHTRNLSP SRAILLSGP
Sbjct: 61  STVTFDDFPYYLSERTRVLLTSAAYVQLKHNDVSKHTRNLSPVSRAILLSGP 112

[Close]

BLAST of Lsi09G000670 vs. TAIR10
Match: AT1G64110.2 (AT1G64110.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.5e-42
Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDE-ITGQKIEQELIRQLLDGK 60
           M+ K + LSALGVGVGVGVGLGL+SGQAVGKW GGN SS+  +T  K+E+E++RQ++DG+
Sbjct: 1   MDSKQMLLSALGVGVGVGVGLGLASGQAVGKWAGGNSSSNNAVTADKMEKEILRQVVDGR 60

Query: 61  NSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
            S +TFDEFPYYLSE+TRVLL SAAYVHLKH D SK+TRNLSPASRAILLSGP
Sbjct: 61  ESKITFDEFPYYLSEQTRVLLTSAAYVHLKHFDASKYTRNLSPASRAILLSGP 113

[Close]

BLAST of Lsi09G000670 vs. TAIR10
Match: AT4G28000.1 (AT4G28000.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-39
Identity = 79/113 (69.91%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDE-ITGQKIEQELIRQLLDGK 60
           MEQK +  SALGVGVG+G+GL  +SGQ++GKW  G+ S+++ +TG+KIEQEL+RQ++DG+
Sbjct: 1   MEQKSVLFSALGVGVGLGIGL--ASGQSLGKWANGSISAEDGLTGEKIEQELVRQIVDGR 60

Query: 61  NSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
            S+VTFDEFPYYLSE+TR+LL SAAYVHLK SDISKHTRNL+P S+AILLSGP
Sbjct: 61  ESSVTFDEFPYYLSEKTRLLLTSAAYVHLKQSDISKHTRNLAPGSKAILLSGP 111

[Close]

BLAST of Lsi09G000670 vs. TAIR10
Match: AT5G52882.1 (AT5G52882.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 2.9e-38
Identity = 78/113 (69.03%), Postives = 97/113 (85.84%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGS-SDEITGQKIEQELIRQLLDGK 60
           MEQK + LSALGVGVG+G+GL  +SGQ++G+W  G+GS  D +TG++IEQELIRQ++DG+
Sbjct: 1   MEQKSVLLSALGVGVGLGIGL--ASGQSLGRWANGSGSVEDGLTGEQIEQELIRQIVDGR 60

Query: 61  NSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
            S VTF+EFPY+LS+RTR LL S AYVHLK  DISKHTRNL+PAS+AILLSGP
Sbjct: 61  ESTVTFEEFPYFLSKRTRELLTSVAYVHLKEYDISKHTRNLAPASKAILLSGP 111

[Close]

BLAST of Lsi09G000670 vs. TAIR10
Match: AT4G24860.1 (AT4G24860.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-10
Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 1


Query: 35  GNGSSDEITGQKIEQELIRQLLDGKNSNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDIS 94
           GNG    I  + I+   +     G+N  V+F  FPYYLSE T+  L+ A+Y+HLK  +  
Sbjct: 280 GNGLQSAIFREAIQAGFV----RGENMEVSFKNFPYYLSEYTKAALLYASYIHLKKKEYV 339

Query: 95  KHTRNLSPASRAILLSGPTGIK-YDASTSSTLLRTI 130
           +   +++P +  ILLSGP G + Y  + +  L R +
Sbjct: 340 QFVSDMTPMNPRILLSGPAGSEIYQETLAKALARDL 371

[Close]

BLAST of Lsi09G000670 vs. TAIR10
Match: AT4G02480.1 (AT4G02480.1 AAA-type ATPase family protein)

HSP 1 Score: 51.2 bits (121), Expect = 5.8e-07
Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 1


Query: 45  QKIEQELIRQLLDGKNSNVTFDEFPYYLSERTRVLLMSAAYVHLK-HSDISKHTRNLSPA 104
           Q  +  L   +L+ +N +++F+ FPYYLS  T+ +LM + YVH+   S  +    +L+ A
Sbjct: 440 QAFKDSLRGGVLNAQNIDISFENFPYYLSATTKGVLMISMYVHMNGGSKYANFATDLTTA 499

Query: 105 SRAILLSGPTG 115
              ILLSGP+G
Sbjct: 500 CPRILLSGPSG 510

[Close]

BLAST of Lsi09G000670 vs. NCBI nr
Match: gi|659074334|ref|XP_008437548.1| (PREDICTED: uncharacterized protein LOC103482929 [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-53
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN
Sbjct: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPT 114
           SNVTF EFPYYLSERTRVLLMSAAYVHLKH DISKHTRNLSPASRAILLSGPT
Sbjct: 61  SNVTFAEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPT 113

[Close]

BLAST of Lsi09G000670 vs. NCBI nr
Match: gi|778699019|ref|XP_011654642.1| (PREDICTED: uncharacterized protein LOC101216426 isoform X2 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 8.6e-53
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQ IEQELIRQLLDGKN
Sbjct: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQNIEQELIRQLLDGKN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPT 114
           SNVTF EFPYYLSERTRVLLMSAAYVHLKH DISKHTRNLSPASRAILLSGPT
Sbjct: 61  SNVTFAEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPT 113

[Close]

BLAST of Lsi09G000670 vs. NCBI nr
Match: gi|778699015|ref|XP_004145904.2| (PREDICTED: nuclear valosin-containing protein-like isoform X1 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 8.6e-53
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQ IEQELIRQLLDGKN
Sbjct: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQNIEQELIRQLLDGKN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGPT 114
           SNVTF EFPYYLSERTRVLLMSAAYVHLKH DISKHTRNLSPASRAILLSGPT
Sbjct: 61  SNVTFAEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPT 113

[Close]

BLAST of Lsi09G000670 vs. NCBI nr
Match: gi|596051133|ref|XP_007220610.1| (hypothetical protein PRUPE_ppa001598mg [Prunus persica])

HSP 1 Score: 189.9 bits (481), Expect = 3.0e-45
Identity = 94/112 (83.93%), Postives = 104/112 (92.86%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSAL VGVGVGVGLGLSSGQAV KWV GN S+DE+T ++IEQEL+RQ+LDG+N
Sbjct: 1   MEQKHIFLSALSVGVGVGVGLGLSSGQAVSKWVNGNCSADEVTAEQIEQELMRQVLDGRN 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTF+EFPYYL ERTR+LL SAAYVHLKHSD+SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFEEFPYYLRERTRMLLTSAAYVHLKHSDLSKHTRNLSPASRAILLSGP 112

[Close]

BLAST of Lsi09G000670 vs. NCBI nr
Match: gi|645258271|ref|XP_008234810.1| (PREDICTED: putative cell division cycle ATPase [Prunus mume])

HSP 1 Score: 185.3 bits (469), Expect = 7.3e-44
Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1


Query: 1   MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKN 60
           MEQKHIFLSAL VGVGVGVGLGLSSGQAV KWV GN S+DE+T ++IEQEL+RQ+L G++
Sbjct: 1   MEQKHIFLSALSVGVGVGVGLGLSSGQAVSKWVNGNCSADEVTAEQIEQELMRQVLPGRD 60

Query: 61  SNVTFDEFPYYLSERTRVLLMSAAYVHLKHSDISKHTRNLSPASRAILLSGP 113
           S VTF+EFPYYL ERTR+LL SAAYVHLKHSD+SKHTRNLSPASRAILLSGP
Sbjct: 61  SKVTFEEFPYYLRERTRMLLTSAAYVHLKHSDLSKHTRNLSPASRAILLSGP 112

The following BLAST results are available for this feature:

BLAST of Lsi09G000670 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G000670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJL1_CUCSA	6.0e-53	97.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139870 PE=4 SV=1	[more]
M5X779_PRUPE	2.1e-45	83.93	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001598mg PE=4 SV=1	[more]
B9RIQ4_RICCO	4.8e-42	76.79	ATP binding protein, putative OS=Ricinus communis GN=RCOM_1581520 PE=4 SV=1	[more]
A0A072UIT2_MEDTR	2.0e-40	77.68	P-loop nucleoside triphosphate hydrolase superfamily protein OS=Medicago truncat...	[more]
A0A061G2D6_THECC	5.8e-40	76.79	P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theo...	[more]

BLAST of Lsi09G000670 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64110.2	1.5e-42	74.34	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT4G28000.1	1.2e-39	69.91	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT5G52882.1	2.9e-38	69.03	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT4G24860.1	4.3e-10	35.42	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT4G02480.1	5.8e-07	38.03	AAA-type ATPase family protein	[more]

BLAST of Lsi09G000670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074334\|ref\|XP_008437548.1\|	2.3e-53	98.23	PREDICTED: uncharacterized protein LOC103482929 [Cucumis melo]	[more]
gi\|778699019\|ref\|XP_011654642.1\|	8.6e-53	97.35	PREDICTED: uncharacterized protein LOC101216426 isoform X2 [Cucumis sativus]	[more]
gi\|778699015\|ref\|XP_004145904.2\|	8.6e-53	97.35	PREDICTED: nuclear valosin-containing protein-like isoform X1 [Cucumis sativus]	[more]
gi\|596051133\|ref\|XP_007220610.1\|	3.0e-45	83.93	hypothetical protein PRUPE_ppa001598mg [Prunus persica]	[more]
gi\|645258271\|ref\|XP_008234810.1\|	7.3e-44	82.14	PREDICTED: putative cell division cycle ATPase [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031122	cytoplasmic microtubule organization
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G000670.1	Lsi09G000670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23074	AAA ATPASE	coord: 2..115 score: 2.0
None	No IPR available	PANTHER	PTHR23074:SF98	SUBFAMILY NOT NAMED	coord: 2..115 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G000670	MELO3C005849.2	Melon (DHL92) v3.6.1	lsimedB012
Lsi09G000670	Cla97C01G000890	Watermelon (97103) v2	lsiwmbB007
Lsi09G000670	Bhi12G000671	Wax gourd	lsiwgoB015
Lsi09G000670	Cp4.1LG13g02860	Cucurbita pepo (Zucchini)	cpelsiB134
Lsi09G000670	Cp4.1LG05g06300	Cucurbita pepo (Zucchini)	cpelsiB579
Lsi09G000670	CsGy5G000830	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G000670	Carg08390	Silver-seed gourd	carlsiB647
Lsi09G000670	Carg27015	Silver-seed gourd	carlsiB522
Lsi09G000670	CsaV3_4G006190	Cucumber (Chinese Long) v3	cuclsiB268
Lsi09G000670	CsaV3_5G000950	Cucumber (Chinese Long) v3	cuclsiB345

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G000670	Bottle gourd (USVL1VR-Ls)	lsilsiB010
Lsi09G000670	Bottle gourd (USVL1VR-Ls)	lsilsiB014
Lsi09G000670	Cucumber (Gy14) v1	cgylsiB347
Lsi09G000670	Cucumber (Gy14) v1	cgylsiB413
Lsi09G000670	Cucurbita maxima (Rimu)	cmalsiB226
Lsi09G000670	Cucurbita maxima (Rimu)	cmalsiB262
Lsi09G000670	Cucurbita maxima (Rimu)	cmalsiB298
Lsi09G000670	Cucurbita maxima (Rimu)	cmalsiB363
Lsi09G000670	Cucurbita maxima (Rimu)	cmalsiB536
Lsi09G000670	Cucurbita moschata (Rifu)	cmolsiB214
Lsi09G000670	Cucurbita moschata (Rifu)	cmolsiB249
Lsi09G000670	Cucurbita moschata (Rifu)	cmolsiB286
Lsi09G000670	Cucurbita moschata (Rifu)	cmolsiB351
Lsi09G000670	Cucurbita moschata (Rifu)	cmolsiB520
Lsi09G000670	Cucurbita pepo (Zucchini)	cpelsiB019
Lsi09G000670	Cucurbita pepo (Zucchini)	cpelsiB163
Lsi09G000670	Cucurbita pepo (Zucchini)	cpelsiB486
Lsi09G000670	Wild cucumber (PI 183967)	cpilsiB150
Lsi09G000670	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G000670	Cucumber (Chinese Long) v2	culsiB151
Lsi09G000670	Cucumber (Chinese Long) v2	culsiB322
Lsi09G000670	Melon (DHL92) v3.5.1	lsimeB012
Lsi09G000670	Melon (DHL92) v3.5.1	lsimeB031
Lsi09G000670	Melon (DHL92) v3.5.1	lsimeB035
Lsi09G000670	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G000670	Watermelon (Charleston Gray)	lsiwcgB018
Lsi09G000670	Watermelon (Charleston Gray)	lsiwcgB021
Lsi09G000670	Watermelon (97103) v1	lsiwmB018
Lsi09G000670	Watermelon (97103) v1	lsiwmB023
Lsi09G000670	Watermelon (97103) v1	lsiwmB027
Lsi09G000670	Cucumber (Gy14) v2	cgyblsiB137
Lsi09G000670	Melon (DHL92) v3.6.1	lsimedB033
Lsi09G000670	Melon (DHL92) v3.6.1	lsimedB039
Lsi09G000670	Silver-seed gourd	carlsiB902
Lsi09G000670	Cucumber (Chinese Long) v3	cuclsiB164
Lsi09G000670	Watermelon (97103) v2	lsiwmbB019
Lsi09G000670	Wax gourd	lsiwgoB045