Lsi07G004710.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G004710.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Pentatricopeptide repeat-containing protein, putative
Location	chr07 : 4971581 .. 4972768 (-)
Sequence length	1188

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCTCTGCGGCCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTGCATCTACAGACACAACTGCTGCTGTATTGAATCACGTTCAGAACTCGAAACTTGTCGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTTTTCCATCTCTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAGCATCAGAAGACTCTTCCACAGGGGCGCCGTGAAGGATTCGTTATAAGGATCATAACGCTATATGGTAAGGTTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGATGCCGTAGGACTGTTAAGTCTTTTAATGCTGTTCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTTGAGGCATTTTTAACAGAAGCTCCAGAAAAATTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATTTGGGTATTTTAAATAGAGCTTATCTTCTTATGTTAGAGATGGAGAAGGTGGGAATAAGACCAGATGTGGTTACCTATACAACGTTAATTTCGGCTTTTTACAAGGTTAATCAATGCGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGATTGACAGGAGACGAGCATGGGATGCTAATAAATTGATGAATGTGATGAGGAATATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCCGGGTTTCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTATGCAGAAGTGGGGATTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAAAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTTAACAAGATGGGGCAGCCTGGTAGGGCTCAATTGATCCTAACATTGGCAAGGAAAAGGGTACCTCCTTTCTCTACAACTCAGTTGGAAGCTTTGAAGAATAGCTGA

mRNA sequence

ATGCTCTCTCTGCGGCCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTGCATCTACAGACACAACTGCTGCTGTATTGAATCACGTTCAGAACTCGAAACTTGTCGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTTTTCCATCTCTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAGCATCAGAAGACTCTTCCACAGGGGCGCCGTGAAGGATTCGTTATAAGGATCATAACGCTATATGGTAAGGTTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGATGCCGTAGGACTGTTAAGTCTTTTAATGCTGTTCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTTGAGGCATTTTTAACAGAAGCTCCAGAAAAATTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATTTGGGTATTTTAAATAGAGCTTATCTTCTTATGTTAGAGATGGAGAAGGTGGGAATAAGACCAGATGTGGTTACCTATACAACGTTAATTTCGGCTTTTTACAAGGTTAATCAATGCGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGATTGACAGGAGACGAGCATGGGATGCTAATAAATTGATGAATGTGATGAGGAATATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCCGGGTTTCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTATGCAGAAGTGGGGATTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAAAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTTAACAAGATGGGGCAGCCTGGTAGGGCTCAATTGATCCTAACATTGGCAAGGAAAAGGGTACCTCCTTTCTCTACAACTCAGTTGGAAGCTTTGAAGAATAGCTGA

Coding sequence (CDS)

ATGCTCTCTCTGCGGCCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTGCATCTACAGACACAACTGCTGCTGTATTGAATCACGTTCAGAACTCGAAACTTGTCGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTTTTCCATCTCTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAGCATCAGAAGACTCTTCCACAGGGGCGCCGTGAAGGATTCGTTATAAGGATCATAACGCTATATGGTAAGGTTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGATGCCGTAGGACTGTTAAGTCTTTTAATGCTGTTCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTTGAGGCATTTTTAACAGAAGCTCCAGAAAAATTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATTTGGGTATTTTAAATAGAGCTTATCTTCTTATGTTAGAGATGGAGAAGGTGGGAATAAGACCAGATGTGGTTACCTATACAACGTTAATTTCGGCTTTTTACAAGGTTAATCAATGCGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGATTGACAGGAGACGAGCATGGGATGCTAATAAATTGATGAATGTGATGAGGAATATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCCGGGTTTCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTATGCAGAAGTGGGGATTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAAAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTTAACAAGATGGGGCAGCCTGGTAGGGCTCAATTGATCCTAACATTGGCAAGGAAAAGGGTACCTCCTTTCTCTACAACTCAGTTGGAAGCTTTGAAGAATAGCTGA

Protein sequence

MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKNS

Homology

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BLAST of Lsi07G004710.1 vs. Swiss-Prot
Match: PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 526.6 bits (1355), Expect = 2.4e-148
Identity = 260/398 (65.33%), Postives = 316/398 (79.40%), Query Frame = 1


Query: 1   MLSLRPIRRFCH----AATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHL 60
           MLSLR IRRFCH    AAT IA   T +   N +Q  K +EEPALVKLK+ERDPEKL++L
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYG 120
           FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGF++RII LYG
Sbjct: 61  FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KVEMIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDI 180
           K  M K ALDTF++M LYGC+R+VKSFNA L+VL    DL  +  FL +AP K+ I++D 
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180

Query: 181 ISVNIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNL 240
           +S NI +K+FC+LGIL+ AY+ M EMEK G+ PDVVTYTTLISA YK  +C I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 240

Query: 241 MVLRGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGF 300
           MVL+GC PNL +FNVRIQ+L++RRRAWDAN L+ +M  + + PD +TYN+VIKGF  A F
Sbjct: 241 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 300

Query: 301 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHS 360
            DMA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+LAYTMCKD M K W+PN+DT+  
Sbjct: 301 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 360

Query: 361 LLKGLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           LLKGL K GQ  +A+ I+ L  +RVPPF + QL +LK+
Sbjct: 361 LLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKS 395

[Close]

BLAST of Lsi07G004710.1 vs. Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-55
Identity = 126/384 (32.81%), Postives = 210/384 (54.69%), Query Frame = 1


Query: 2   LSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA   A   TTA     +  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+  M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFN-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + +++   +     E P+++N I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185

Query: 182 NIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVL 241
            I++K++CD G   +A  +M +M+  G+    + +TT++S+ YK  + E+++ LWN MV 
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245

Query: 242 RGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDM 301
           +GC  + A++NVRI     +       +L+  M ++G+ PD ++YN ++  +C+ G LD 
Sbjct: 246 KGCELDNAAYNVRIMSA-QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305

Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 361
           AK+VY  L G+   PN   ++T+I +LC S  +   Y + K ++  +  P+ +T+  L+ 
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365

Query: 362 GLNKMGQPGRAQLILTLARKRVPP 384
           GL +  +   A+ ++   +K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380

[Close]

BLAST of Lsi07G004710.1 vs. Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 4.2e-52
Identity = 116/380 (30.53%), Postives = 208/380 (54.74%), Query Frame = 1


Query: 2   LSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANA 61
           L+  P  R   +A+ I S D+   +      SK   + AL  LK+E+DP+++  + +A +
Sbjct: 17  LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76

Query: 62  HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFVIRIITLYGKVEM 121
                  +R AF   V  LA  + F  + +LL+   +  P  + E F    I LY +  M
Sbjct: 77  LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136

Query: 122 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 181
           + H+L  F D+  +   RTVKS NA+L   +  +D    +    E P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196

Query: 182 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 241
            ++K FC+ G  + +Y ++ EME+ GI+P+  ++  +IS FY  ++ +    +  +M  R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256

Query: 242 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 301
           G    ++++N+RIQ L  R+++ +A  L++ M + G+ P+ VTY+ +I GFC     + A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316

Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 361
           K+++  +   G KP+ + Y T+I+YLC+ GDF  A ++CK++M KNW P+   + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376

Query: 362 LNKMGQPGRAQLILTLARKR 381
           L K  +   A+ ++   +++
Sbjct: 377 LAKDSKVEEAKELIGQVKEK 391

[Close]

BLAST of Lsi07G004710.1 vs. Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.7e-51
Identity = 115/373 (30.83%), Postives = 196/373 (52.55%), Query Frame = 1


Query: 6   PIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV++      A ++  Q S      +LV    ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVVSEPTAVTAAISPPQKSLT----SLVN--GERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHAL 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII+LYGK  M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKA 185
             F +M    C+R+V SFNA+L     ++    +E    E P K +I+ DI+S N ++KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPN 245
            C+   L  A  L+ E+E  G++PD+VT+ TL+ + Y   Q E+   +W  MV +    +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255

Query: 246 LASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYS 305
           + ++N R+  L +  ++ +   L   ++  G+ PD  ++N +I+G    G +D A+  Y 
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315

Query: 306 ALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMG 365
            +   GY+P+   +  ++  +C++GDF  A  + K+  +K +     T+  L+  L K  
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375

Query: 366 QPGRAQLILTLAR 379
           +   A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382

[Close]

BLAST of Lsi07G004710.1 vs. Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-47
Identity = 112/372 (30.11%), Postives = 186/372 (50.00%), Query Frame = 1


Query: 8   RRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKL-KAERDPEKLFHLFKANAHNRLV 67
           RRF  A T  A+T +               +P+L+ L   ERDP+ +   FK        
Sbjct: 21  RRFFSAVTAAAATPSPP-------------KPSLITLVNDERDPKFITEKFKKACQAEWF 80

Query: 68  IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHALD 127
            +N   +E TV RLA A++F+++E +LE Q   P   +EGFV RII LYG+V M ++A  
Sbjct: 81  RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140

Query: 128 TFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKAF 187
            F +M    C+RT  SFNA+L   + ++    +E    E P K +IE D+ S N ++K  
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200

Query: 188 CDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPNL 247
           C  G    A  L+ E+E  G++PD +T+  L+   Y   + E    +W  MV +    ++
Sbjct: 201 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 260

Query: 248 ASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYSA 307
            S+N R+  L    ++ +   L + ++   + PD  T+  +IKGF   G LD A   Y  
Sbjct: 261 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 320

Query: 308 LHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMGQ 367
           +  +G +P   ++ +++  +C++GD   AY +CK+   K    +   +  ++  L K  +
Sbjct: 321 IEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK 379

Query: 368 PGRAQLILTLAR 379
              A+ I+ LA+
Sbjct: 381 QDEAEEIVELAK 379

[Close]

BLAST of Lsi07G004710.1 vs. TrEMBL
Match: A0A0A0KTI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004890 PE=4 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 1.3e-204
Identity = 356/395 (90.13%), Postives = 374/395 (94.68%), Query Frame = 1


Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI STDTTAAVLNHVQNSK +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF+IRII LYGK EM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
           IKHALDTFYDMHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL+EAPEKF+IELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLLMLEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GCLPNL +FNVRIQ+LI+RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+S DFNLA+T+CKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALKNS 396
           LNKMG+ G+AQLIL LARKRVPPFS  QLEAL  +
Sbjct: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTT 395

[Close]

BLAST of Lsi07G004710.1 vs. TrEMBL
Match: M5XC76_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006834mg PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.3e-172
Identity = 293/384 (76.30%), Postives = 338/384 (88.02%), Query Frame = 1


Query: 10  FCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANAHNRLVIEN 69
           FCHAA  I S    AAV NHV ++K +EEPALVKLKAERDPEKLFHLFKANAHN LVIEN
Sbjct: 4   FCHAAIAITSNGCPAAVSNHVFDTKPLEEPALVKLKAERDPEKLFHLFKANAHNTLVIEN 63

Query: 70  RFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHALDTFY 129
           RFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF++RIITLYGK  M KHA+DTF 
Sbjct: 64  RFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIMRIITLYGKAGMTKHAIDTFC 123

Query: 130 DMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKAFCDL 189
           DMHLYGC RTVKSFNA LKVL +TRDLGA+EAFL E P+KF+IE+D+ SVNI++KAFC++
Sbjct: 124 DMHLYGCCRTVKSFNAALKVLTQTRDLGAIEAFLNEVPQKFDIEVDVFSVNILIKAFCEM 183

Query: 190 GILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPNLASF 249
           GIL +AY +M+EMEK+GIRPDV+TYTTL+SAFYK N CEI NGLWNLMVL+ CLPNLA+F
Sbjct: 184 GILVKAYRIMVEMEKLGIRPDVITYTTLMSAFYKENWCEIGNGLWNLMVLKRCLPNLATF 243

Query: 250 NVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYSALHG 309
           NVRIQYL++RRRAW+ANKLM +M+N+GI PDEVTYNLVIKGF QA +L+MAKRVYSALHG
Sbjct: 244 NVRIQYLVNRRRAWEANKLMGLMQNVGITPDEVTYNLVIKGFFQARYLEMAKRVYSALHG 303

Query: 310 SGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMGQPGR 369
             YKPN+KIYQTMIHYLC+ GDF+LAYTMCKD M KNW+PN+DTIH+LL+GL +  Q G+
Sbjct: 304 KAYKPNIKIYQTMIHYLCKGGDFDLAYTMCKDCMQKNWYPNVDTIHTLLEGLKRGKQLGK 363

Query: 370 AQLILTLARKRVPPFSTTQLEALK 394
           A+ I+ L RKRVPPFS+ QL  L+
Sbjct: 364 AKAIMMLVRKRVPPFSSKQLGDLQ 387

[Close]

BLAST of Lsi07G004710.1 vs. TrEMBL
Match: W9RC69_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025797 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 2.8e-167
Identity = 285/398 (71.61%), Postives = 342/398 (85.93%), Query Frame = 1


Query: 1   MLSLRPIRRFCHAATVIAST----DTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHL 60
           MLSLRPIRRFCHAA   +++    D ++AV N V N K +EEPALVKLKAERDP+KLFHL
Sbjct: 1   MLSLRPIRRFCHAAAPASASAALKDCSSAVSNKVFNPKELEEPALVKLKAERDPDKLFHL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYG 120
           FKANAHNR+V+ENRFAFEDTV+RLAGA+RFDYIEHLLEHQKTLPQGRREGF++RII LYG
Sbjct: 61  FKANAHNRIVVENRFAFEDTVARLAGAQRFDYIEHLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KVEMIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDI 180
           K  M ++A+ TFYDMHLYGCRRTVKSFNA L+VL + RDL A+E F+ E P KF+I+LDI
Sbjct: 121 KAGMTENAIRTFYDMHLYGCRRTVKSFNAALRVLTQLRDLRAIEDFVREVPSKFDIQLDI 180

Query: 181 ISVNIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNL 240
            SVNIVVKAFCD+G L++AYL+M+EM K+GI PDV+TYTTL+SAFYK N+ EI NGLWNL
Sbjct: 181 FSVNIVVKAFCDMGDLDKAYLIMVEMGKMGISPDVITYTTLMSAFYKHNRYEIGNGLWNL 240

Query: 241 MVLRGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGF 300
           MVLRGCLPNLA+FNVRIQYL+ +RRAW+AN++M++MR +GI PDEVT+NLVIKGFCQA +
Sbjct: 241 MVLRGCLPNLATFNVRIQYLVCKRRAWEANRVMSLMRTLGIAPDEVTFNLVIKGFCQAEY 300

Query: 301 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHS 360
            DMAKR YSA    GYKPN KIYQTMIHYLC+ GDF +AYTMCKD+M KNWFP++DTI+ 
Sbjct: 301 FDMAKRAYSAFRSRGYKPNAKIYQTMIHYLCKEGDFGVAYTMCKDSMQKNWFPSVDTIYE 360

Query: 361 LLKGLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           LL+GL K G+ G+A+ I+TLARKRVPP+   +L AL++
Sbjct: 361 LLEGLKKSGKLGKAEAIMTLARKRVPPYPRDKLAALES 398

[Close]

BLAST of Lsi07G004710.1 vs. TrEMBL
Match: B9RV44_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0898900 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 1.0e-166
Identity = 289/390 (74.10%), Postives = 344/390 (88.21%), Query Frame = 1


Query: 1   MLSLRPIRRFCH-AATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKA 60
           MLSLRPIRRFC+ AA  I+STD+ AAV N V N K +EEPAL KLKAERDPEKLF+LFKA
Sbjct: 1   MLSLRPIRRFCYSAAAAISSTDSPAAVSNRVLNQKPLEEPALAKLKAERDPEKLFNLFKA 60

Query: 61  NAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVE 120
           NA NRLVIENRFAFEDT+SRLAGARRFDYIEHLLEHQKTLPQGRREGF+IRII LYGK  
Sbjct: 61  NARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAG 120

Query: 121 MIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISV 180
           M KHA+DTF DMH+YGC+RTVKSFNA LKVL +T DL A++AFL+E PEKF+I LDI SV
Sbjct: 121 MTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPEKFDIILDIFSV 180

Query: 181 NIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVL 240
           NI++KAFC + IL++AYL+M++ME++GIRPDVVTYTTLISAFYK ++ EISNGLWNLMVL
Sbjct: 181 NIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEISNGLWNLMVL 240

Query: 241 RGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDM 300
           +GCLPNL++FNVRIQ+L++ R++W AN++M +M  IGI PDEVTYNLVIKGF QAG+L+M
Sbjct: 241 KGCLPNLSTFNVRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNLVIKGFGQAGYLEM 300

Query: 301 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 360
           A+RVYSALHG GYKPNVKIYQTMIH LC+ G+F+LAYTMCKD M K+WF N+DTIH+LL 
Sbjct: 301 ARRVYSALHGKGYKPNVKIYQTMIHCLCKGGEFDLAYTMCKDCMKKSWFLNVDTIHTLLD 360

Query: 361 GLNKMGQPGRAQLILTLARKRVPPFSTTQL 390
           GL K GQ  +A++I+TLA++R+PPFS+ QL
Sbjct: 361 GLKKNGQLDKAKMIVTLAQRRMPPFSSKQL 390

[Close]

BLAST of Lsi07G004710.1 vs. TrEMBL
Match: A0A061FTX6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_011927 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 1.2e-165
Identity = 285/395 (72.15%), Postives = 338/395 (85.57%), Query Frame = 1


Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSL+ IRRFCHAA++ ++TDT A V   + +   ++E AL KLKAERDP+KLF LFKAN
Sbjct: 1   MLSLQAIRRFCHAASIASTTDTFAVVSKQLPSKIPLQESALSKLKAERDPDKLFILFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHN++VIENRFAFEDTVSRLAGAR FDYIEHLLEHQKTLPQGRREGF++RII LYGK  M
Sbjct: 61  AHNKVVIENRFAFEDTVSRLAGARHFDYIEHLLEHQKTLPQGRREGFIMRIIMLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
           IKHAL+TFYDMHLYGC RTVKSFNA LKVL++T D+ A+EAFL++ P+KFN+ELD  SVN
Sbjct: 121 IKHALNTFYDMHLYGCERTVKSFNAALKVLIQTHDIRAIEAFLSDVPQKFNVELDTYSVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           IVVKAFC++  L RAYL+M+EMEK+GIRPDV+TYTTLIS FY+ N+ EI NGLWNLMV +
Sbjct: 181 IVVKAFCEMDFLERAYLVMVEMEKLGIRPDVITYTTLISTFYQKNRWEIGNGLWNLMVYK 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GC PNL +FNVRIQYL++RRRAW AN LM +MR IGIVPDEVTYNLVIKGFC AG+L+MA
Sbjct: 241 GCKPNLTTFNVRIQYLVNRRRAWQANDLMRLMRKIGIVPDEVTYNLVIKGFCLAGYLEMA 300

Query: 301 KRVYSALH-GSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 360
           KRVYS+L     Y+PN+KIYQTMIHYLC+ GD+NLAYTMCKD M KNWF N+DTI SLL+
Sbjct: 301 KRVYSSLEFCREYRPNIKIYQTMIHYLCKGGDYNLAYTMCKDCMRKNWFLNVDTIRSLLE 360

Query: 361 GLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           GL K GQ G+A++I+ L R RVPPFS+TQL+ L++
Sbjct: 361 GLIKNGQLGKAKMIMKLVRSRVPPFSSTQLDTLQS 395

[Close]

BLAST of Lsi07G004710.1 vs. TAIR10
Match: AT1G80150.1 (AT1G80150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 526.6 bits (1355), Expect = 1.4e-149
Identity = 260/398 (65.33%), Postives = 316/398 (79.40%), Query Frame = 1


Query: 1   MLSLRPIRRFCH----AATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHL 60
           MLSLR IRRFCH    AAT IA   T +   N +Q  K +EEPALVKLK+ERDPEKL++L
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYG 120
           FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGF++RII LYG
Sbjct: 61  FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KVEMIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDI 180
           K  M K ALDTF++M LYGC+R+VKSFNA L+VL    DL  +  FL +AP K+ I++D 
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180

Query: 181 ISVNIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNL 240
           +S NI +K+FC+LGIL+ AY+ M EMEK G+ PDVVTYTTLISA YK  +C I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 240

Query: 241 MVLRGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGF 300
           MVL+GC PNL +FNVRIQ+L++RRRAWDAN L+ +M  + + PD +TYN+VIKGF  A F
Sbjct: 241 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 300

Query: 301 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHS 360
            DMA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+LAYTMCKD M K W+PN+DT+  
Sbjct: 301 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 360

Query: 361 LLKGLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           LLKGL K GQ  +A+ I+ L  +RVPPF + QL +LK+
Sbjct: 361 LLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKS 395

[Close]

BLAST of Lsi07G004710.1 vs. TAIR10
Match: AT4G36680.1 (AT4G36680.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 218.8 bits (556), Expect = 6.1e-57
Identity = 126/384 (32.81%), Postives = 210/384 (54.69%), Query Frame = 1


Query: 2   LSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA   A   TTA     +  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+  M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFN-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + +++   +     E P+++N I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185

Query: 182 NIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVL 241
            I++K++CD G   +A  +M +M+  G+    + +TT++S+ YK  + E+++ LWN MV 
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245

Query: 242 RGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDM 301
           +GC  + A++NVRI     +       +L+  M ++G+ PD ++YN ++  +C+ G LD 
Sbjct: 246 KGCELDNAAYNVRIMSA-QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305

Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 361
           AK+VY  L G+   PN   ++T+I +LC S  +   Y + K ++  +  P+ +T+  L+ 
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365

Query: 362 GLNKMGQPGRAQLILTLARKRVPP 384
           GL +  +   A+ ++   +K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380

[Close]

BLAST of Lsi07G004710.1 vs. TAIR10
Match: AT1G61870.1 (AT1G61870.1 pentatricopeptide repeat 336)

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-53
Identity = 116/380 (30.53%), Postives = 208/380 (54.74%), Query Frame = 1


Query: 2   LSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANA 61
           L+  P  R   +A+ I S D+   +      SK   + AL  LK+E+DP+++  + +A +
Sbjct: 17  LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76

Query: 62  HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFVIRIITLYGKVEM 121
                  +R AF   V  LA  + F  + +LL+   +  P  + E F    I LY +  M
Sbjct: 77  LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136

Query: 122 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 181
           + H+L  F D+  +   RTVKS NA+L   +  +D    +    E P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196

Query: 182 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 241
            ++K FC+ G  + +Y ++ EME+ GI+P+  ++  +IS FY  ++ +    +  +M  R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256

Query: 242 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 301
           G    ++++N+RIQ L  R+++ +A  L++ M + G+ P+ VTY+ +I GFC     + A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316

Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 361
           K+++  +   G KP+ + Y T+I+YLC+ GDF  A ++CK++M KNW P+   + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376

Query: 362 LNKMGQPGRAQLILTLARKR 381
           L K  +   A+ ++   +++
Sbjct: 377 LAKDSKVEEAKELIGQVKEK 391

[Close]

BLAST of Lsi07G004710.1 vs. TAIR10
Match: AT1G55890.1 (AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-52
Identity = 115/373 (30.83%), Postives = 196/373 (52.55%), Query Frame = 1


Query: 6   PIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV++      A ++  Q S      +LV    ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVVSEPTAVTAAISPPQKSLT----SLVN--GERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHAL 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII+LYGK  M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKA 185
             F +M    C+R+V SFNA+L     ++    +E    E P K +I+ DI+S N ++KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPN 245
            C+   L  A  L+ E+E  G++PD+VT+ TL+ + Y   Q E+   +W  MV +    +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255

Query: 246 LASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYS 305
           + ++N R+  L +  ++ +   L   ++  G+ PD  ++N +I+G    G +D A+  Y 
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315

Query: 306 ALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMG 365
            +   GY+P+   +  ++  +C++GDF  A  + K+  +K +     T+  L+  L K  
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375

Query: 366 QPGRAQLILTLAR 379
           +   A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382

[Close]

BLAST of Lsi07G004710.1 vs. TAIR10
Match: AT3G13160.1 (AT3G13160.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 191.8 bits (486), Expect = 7.9e-49
Identity = 112/372 (30.11%), Postives = 186/372 (50.00%), Query Frame = 1


Query: 8   RRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKL-KAERDPEKLFHLFKANAHNRLV 67
           RRF  A T  A+T +               +P+L+ L   ERDP+ +   FK        
Sbjct: 21  RRFFSAVTAAAATPSPP-------------KPSLITLVNDERDPKFITEKFKKACQAEWF 80

Query: 68  IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHALD 127
            +N   +E TV RLA A++F+++E +LE Q   P   +EGFV RII LYG+V M ++A  
Sbjct: 81  RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140

Query: 128 TFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKAF 187
            F +M    C+RT  SFNA+L   + ++    +E    E P K +IE D+ S N ++K  
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200

Query: 188 CDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPNL 247
           C  G    A  L+ E+E  G++PD +T+  L+   Y   + E    +W  MV +    ++
Sbjct: 201 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 260

Query: 248 ASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYSA 307
            S+N R+  L    ++ +   L + ++   + PD  T+  +IKGF   G LD A   Y  
Sbjct: 261 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 320

Query: 308 LHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMGQ 367
           +  +G +P   ++ +++  +C++GD   AY +CK+   K    +   +  ++  L K  +
Sbjct: 321 IEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK 379

Query: 368 PGRAQLILTLAR 379
              A+ I+ LA+
Sbjct: 381 QDEAEEIVELAK 379

[Close]

BLAST of Lsi07G004710.1 vs. NCBI nr
Match: gi|449468996|ref|XP_004152207.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucumis sativus])

HSP 1 Score: 720.3 bits (1858), Expect = 1.8e-204
Identity = 356/395 (90.13%), Postives = 374/395 (94.68%), Query Frame = 1


Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI STDTTAAVLNHVQNSK +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF+IRII LYGK EM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
           IKHALDTFYDMHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL+EAPEKF+IELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLLMLEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GCLPNL +FNVRIQ+LI+RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+S DFNLA+T+CKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALKNS 396
           LNKMG+ G+AQLIL LARKRVPPFS  QLEAL  +
Sbjct: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTT 395

[Close]

BLAST of Lsi07G004710.1 vs. NCBI nr
Match: gi|659108995|ref|XP_008454493.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucumis melo])

HSP 1 Score: 720.3 bits (1858), Expect = 1.8e-204
Identity = 355/395 (89.87%), Postives = 375/395 (94.94%), Query Frame = 1


Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI ST TTAAVLNHVQNSK +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 530 MLSLRPIRRFCHAATVIPSTGTTAAVLNHVQNSKALEEPALVKLKAERDPEKLFHLFKAN 589

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF+IRII LYGK EM
Sbjct: 590 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 649

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
           IKHALDTFYDMHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL EAPEKF+IELDIISVN
Sbjct: 650 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLNEAPEKFDIELDIISVN 709

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLLML+MEK+GI+PDVVTYTTLISA YK  + EISNGLWNLMVLR
Sbjct: 710 ILVKAFCDFGFLNRAYLLMLDMEKLGIKPDVVTYTTLISASYKDRRSEISNGLWNLMVLR 769

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GCLPNL +FNVRIQ+LI+RRRAWDANKLM VMR+IGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 770 GCLPNLTTFNVRIQHLIERRRAWDANKLMKVMRSIGIVPDEVTYNLVIKGFCQAGLLDMA 829

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+SGDFNLA+T+CKDAMNKNWFPNIDTIHSLLKG
Sbjct: 830 KRVYSALHGSGYKPNVKIYQTMIHYLCKSGDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 889

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALKNS 396
           LNKMGQ G+AQLIL+LARKR+PPFS TQLEAL  +
Sbjct: 890 LNKMGQAGKAQLILSLARKRIPPFSKTQLEALNTT 924

[Close]

BLAST of Lsi07G004710.1 vs. NCBI nr
Match: gi|1009112957|ref|XP_015870951.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 644.4 bits (1661), Expect = 1.3e-181
Identity = 307/394 (77.92%), Postives = 354/394 (89.85%), Query Frame = 1


Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFC+AATV+AS+D  AA+ NHV ++K +EEPAL+KLKAERDPEKLF LFKAN
Sbjct: 1   MLSLRPIRRFCNAATVLASSDCRAAISNHVLSTKRLEEPALLKLKAERDPEKLFQLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNR+VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQG REGF++RII LYGK  M
Sbjct: 61  AHNRIVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGWREGFIVRIIMLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
            KHA+DTFYDMHLYGCRRTVKSFNA LKVL  T DLGA+EAFL E P KF+IELD+ SVN
Sbjct: 121 TKHAVDTFYDMHLYGCRRTVKSFNAALKVLTLTCDLGAIEAFLKEVPSKFDIELDVFSVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           IV+KA+C++GILN+AYL+M+EM KVGIRPDVVTYTTL+SAFYK N+ EI NGLWNLMVLR
Sbjct: 181 IVIKAYCEMGILNKAYLIMVEMAKVGIRPDVVTYTTLMSAFYKHNRWEIGNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
            C PNLA+FNVRIQYL++RRRAW+AN++M +M N+GI PDEVTYNLVIKGFCQ+G+L+MA
Sbjct: 241 RCSPNLATFNVRIQYLVNRRRAWEANRVMRIMPNVGITPDEVTYNLVIKGFCQSGYLEMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHG GYKPN KIYQTMIHYLC+ GDF+LAYTMCKD + KNWFPNIDTIH+LL+G
Sbjct: 301 KRVYSALHGKGYKPNAKIYQTMIHYLCKGGDFDLAYTMCKDCLQKNWFPNIDTIHTLLEG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           L K GQ G+A+ I+ LAR+RVPPFS+ QL AL++
Sbjct: 361 LRKTGQLGKARAIMALARRRVPPFSSDQLGALQS 394

[Close]

BLAST of Lsi07G004710.1 vs. NCBI nr
Match: gi|645277333|ref|XP_008243722.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Prunus mume])

HSP 1 Score: 629.4 bits (1622), Expect = 4.2e-177
Identity = 301/393 (76.59%), Postives = 347/393 (88.30%), Query Frame = 1


Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLR  RRFCHAA  I S    AAV NHV ++K +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRTSRRFCHAAIAITSNGCPAAVSNHVFDTKPLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHN LVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF++RIITLYGK  M
Sbjct: 61  AHNTLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIMRIITLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
            KHA+DTF DMHLYGC RTVKSFNA LKVL +TRDLGA+EAFL E P+KF+IE+D+ SVN
Sbjct: 121 TKHAIDTFCDMHLYGCCRTVKSFNAALKVLTQTRDLGAIEAFLNEVPQKFDIEVDVFSVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           I++KAFC++GIL +AY +M+EMEK+GIRPDV+TYTTL+SAFYK N CEI NGLWNLMVL+
Sbjct: 181 ILIKAFCEMGILVKAYRIMVEMEKLGIRPDVITYTTLMSAFYKENWCEIGNGLWNLMVLK 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
            CLPNLA+FNVRIQYL++RRRAW+ANKLM +M+N+GI PDEVTYNLVIKGF QAG+L+MA
Sbjct: 241 RCLPNLATFNVRIQYLVNRRRAWEANKLMGLMQNVGITPDEVTYNLVIKGFFQAGYLEMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHG GYKPN+KIYQTMIHYLC+ GDF+LAYTMCKD M KNW+PN+DTIH+LL+G
Sbjct: 301 KRVYSALHGKGYKPNIKIYQTMIHYLCKGGDFDLAYTMCKDCMQKNWYPNVDTIHTLLEG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALK 394
           L +  Q G+A+ I+ L RKRVPPFS+ Q+  L+
Sbjct: 361 LKRGKQLGKAKAIMMLVRKRVPPFSSKQVGDLQ 393

[Close]

BLAST of Lsi07G004710.1 vs. NCBI nr
Match: gi|657964728|ref|XP_008373998.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Malus domestica])

HSP 1 Score: 626.3 bits (1614), Expect = 3.6e-176
Identity = 302/393 (76.84%), Postives = 344/393 (87.53%), Query Frame = 1


Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLR  RRFC+AA  I S D  AA  N V N+K +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRTSRRFCNAAIAITSNDCPAAASNRVLNTKPLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNRLVIENRFAF+D VSRLAGA RFDYIEHLLEHQK+LPQGRREGF++RIITLYGK  M
Sbjct: 61  AHNRLVIENRFAFDDMVSRLAGAHRFDYIEHLLEHQKSLPQGRREGFIMRIITLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
            KHA+DTF DMHLYGC RTVKSFNA LKVL +TRDLGALEAFL+E PEKF+IELDI SVN
Sbjct: 121 TKHAIDTFCDMHLYGCSRTVKSFNAALKVLTQTRDLGALEAFLSEIPEKFDIELDIYSVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           IV+KAFC++GIL +AY +M++MEK+GI+PDV+TYTTL+SAFYK N+ EI NGLWNLM+L+
Sbjct: 181 IVIKAFCEMGILVKAYQIMVQMEKLGIKPDVITYTTLMSAFYKDNRWEIGNGLWNLMILK 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GCLPNLA+FNVRIQYL+ RRRAW+AN+LM +M+NI I PDEVTYNLVIKGFCQAG+L+MA
Sbjct: 241 GCLPNLATFNVRIQYLVYRRRAWEANRLMGLMQNIEITPDEVTYNLVIKGFCQAGYLEMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHG GYKPNVKIYQTMIHYLC+ GDF+LAYTMCKD M KNWFPN+DTI +LL+G
Sbjct: 301 KRVYSALHGKGYKPNVKIYQTMIHYLCKGGDFDLAYTMCKDCMQKNWFPNVDTIRTLLEG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALK 394
           L K  Q G+A+ I+ L RKR PPFST QL  L+
Sbjct: 361 LKKANQLGKAKAIMMLVRKRAPPFSTKQLGVLQ 393

The following BLAST results are available for this feature:

BLAST of Lsi07G004710.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP134_ARATH	2.4e-148	65.33	Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop...	[more]
PP352_ARATH	1.1e-55	32.81	Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop...	[more]
PPR87_ARATH	4.2e-52	30.53	Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop...	[more]
PPR82_ARATH	2.7e-51	30.83	Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop...	[more]
PP226_ARATH	1.4e-47	30.11	Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop...	[more]

BLAST of Lsi07G004710.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTI5_CUCSA	1.3e-204	90.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004890 PE=4 SV=1	[more]
M5XC76_PRUPE	1.3e-172	76.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006834mg PE=4 SV=1	[more]
W9RC69_9ROSA	2.8e-167	71.61	Uncharacterized protein OS=Morus notabilis GN=L484_025797 PE=4 SV=1	[more]
B9RV44_RICCO	1.0e-166	74.10	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
A0A061FTX6_THECC	1.2e-165	72.15	Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TC...	[more]

BLAST of Lsi07G004710.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80150.1	1.4e-149	65.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G36680.1	6.1e-57	32.81	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G61870.1	2.4e-53	30.53	pentatricopeptide repeat 336	[more]
AT1G55890.1	1.5e-52	30.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G13160.1	7.9e-49	30.11	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Lsi07G004710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468996\|ref\|XP_004152207.1\|	1.8e-204	90.13	PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ...	[more]
gi\|659108995\|ref\|XP_008454493.1\|	1.8e-204	89.87	PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial ...	[more]
gi\|1009112957\|ref\|XP_015870951.1\|	1.3e-181	77.92	PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ...	[more]
gi\|645277333\|ref\|XP_008243722.1\|	4.2e-177	76.59	PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ...	[more]
gi\|657964728\|ref\|XP_008373998.1\|	3.6e-176	76.84	PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Malus domestic...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi07G004710	Lsi07G004710	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G004710.1.CDS.1	Lsi07G004710.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi07G004710.1	Lsi07G004710.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 111..136 score: 1.3coord: 318..341 score:
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 244..293 score: 1.7E-9coord: 175..223 score: 8.4
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 178..211 score: 0.0024coord: 318..350 score: 3.1E-5coord: 282..316 score: 4.8E-7coord: 212..245 score: 3.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 210..244 score: 9.668coord: 280..314 score: 12.2coord: 139..169 score: 5.24coord: 175..209 score: 9.997coord: 315..349 score: 8.988coord: 350..380 score: 5.777coord: 245..279 score: 7
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 31..392 score: 6.8E
None	No IPR available	PANTHER	PTHR24015:SF439	SUBFAMILY NOT NAMED	coord: 31..392 score: 6.8E