Lsi07G004710 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G004710
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr07 : 4971581 .. 4972768 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTCTGCGGCCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTGCATCTACAGACACAACTGCTGCTGTATTGAATCACGTTCAGAACTCGAAACTTGTCGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTTTTCCATCTCTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAGCATCAGAAGACTCTTCCACAGGGGCGCCGTGAAGGATTCGTTATAAGGATCATAACGCTATATGGTAAGGTTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGATGCCGTAGGACTGTTAAGTCTTTTAATGCTGTTCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTTGAGGCATTTTTAACAGAAGCTCCAGAAAAATTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATTTGGGTATTTTAAATAGAGCTTATCTTCTTATGTTAGAGATGGAGAAGGTGGGAATAAGACCAGATGTGGTTACCTATACAACGTTAATTTCGGCTTTTTACAAGGTTAATCAATGCGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGATTGACAGGAGACGAGCATGGGATGCTAATAAATTGATGAATGTGATGAGGAATATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCCGGGTTTCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTATGCAGAAGTGGGGATTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAAAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTTAACAAGATGGGGCAGCCTGGTAGGGCTCAATTGATCCTAACATTGGCAAGGAAAAGGGTACCTCCTTTCTCTACAACTCAGTTGGAAGCTTTGAAGAATAGCTGA

mRNA sequence

ATGCTCTCTCTGCGGCCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTGCATCTACAGACACAACTGCTGCTGTATTGAATCACGTTCAGAACTCGAAACTTGTCGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTTTTCCATCTCTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAGCATCAGAAGACTCTTCCACAGGGGCGCCGTGAAGGATTCGTTATAAGGATCATAACGCTATATGGTAAGGTTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGATGCCGTAGGACTGTTAAGTCTTTTAATGCTGTTCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTTGAGGCATTTTTAACAGAAGCTCCAGAAAAATTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATTTGGGTATTTTAAATAGAGCTTATCTTCTTATGTTAGAGATGGAGAAGGTGGGAATAAGACCAGATGTGGTTACCTATACAACGTTAATTTCGGCTTTTTACAAGGTTAATCAATGCGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGATTGACAGGAGACGAGCATGGGATGCTAATAAATTGATGAATGTGATGAGGAATATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCCGGGTTTCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTATGCAGAAGTGGGGATTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAAAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTTAACAAGATGGGGCAGCCTGGTAGGGCTCAATTGATCCTAACATTGGCAAGGAAAAGGGTACCTCCTTTCTCTACAACTCAGTTGGAAGCTTTGAAGAATAGCTGA

Coding sequence (CDS)

ATGCTCTCTCTGCGGCCCATTCGCAGATTCTGCCATGCTGCTACCGTCATTGCATCTACAGACACAACTGCTGCTGTATTGAATCACGTTCAGAACTCGAAACTTGTCGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTTTTCCATCTCTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCTTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTTGATTACATTGAGCATTTACTTGAGCATCAGAAGACTCTTCCACAGGGGCGCCGTGAAGGATTCGTTATAAGGATCATAACGCTATATGGTAAGGTTGAGATGATCAAGCATGCCCTTGACACTTTTTATGATATGCACTTATATGGATGCCGTAGGACTGTTAAGTCTTTTAATGCTGTTCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTTGAGGCATTTTTAACAGAAGCTCCAGAAAAATTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATTTGGGTATTTTAAATAGAGCTTATCTTCTTATGTTAGAGATGGAGAAGGTGGGAATAAGACCAGATGTGGTTACCTATACAACGTTAATTTCGGCTTTTTACAAGGTTAATCAATGCGAAATTAGTAATGGTCTGTGGAATCTAATGGTTTTGAGGGGTTGTTTGCCCAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGATTGACAGGAGACGAGCATGGGATGCTAATAAATTGATGAATGTGATGAGGAATATTGGGATTGTACCGGATGAGGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCCGGGTTTCTTGATATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTATGCAGAAGTGGGGATTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAAAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTTAACAAGATGGGGCAGCCTGGTAGGGCTCAATTGATCCTAACATTGGCAAGGAAAAGGGTACCTCCTTTCTCTACAACTCAGTTGGAAGCTTTGAAGAATAGCTGA

Protein sequence

MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKNS
Homology
[Close]
BLAST of Lsi07G004710 vs. Swiss-Prot
Match: PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 526.6 bits (1355), Expect = 2.4e-148
Identity = 260/398 (65.33%), Postives = 316/398 (79.40%), Query Frame = 1 

Query: 1   MLSLRPIRRFCH----AATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHL 60
           MLSLR IRRFCH    AAT IA   T +   N +Q  K +EEPALVKLK+ERDPEKL++L
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYG 120
           FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGF++RII LYG
Sbjct: 61  FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KVEMIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDI 180
           K  M K ALDTF++M LYGC+R+VKSFNA L+VL    DL  +  FL +AP K+ I++D 
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180

Query: 181 ISVNIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNL 240
           +S NI +K+FC+LGIL+ AY+ M EMEK G+ PDVVTYTTLISA YK  +C I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 240

Query: 241 MVLRGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGF 300
           MVL+GC PNL +FNVRIQ+L++RRRAWDAN L+ +M  + + PD +TYN+VIKGF  A F
Sbjct: 241 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 300

Query: 301 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHS 360
            DMA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+LAYTMCKD M K W+PN+DT+  
Sbjct: 301 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 360

Query: 361 LLKGLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           LLKGL K GQ  +A+ I+ L  +RVPPF + QL +LK+
Sbjct: 361 LLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKS 395

[Close]
BLAST of Lsi07G004710 vs. Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-55
Identity = 126/384 (32.81%), Postives = 210/384 (54.69%), Query Frame = 1 

Query: 2   LSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA   A   TTA     +  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+  M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFN-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + +++   +     E P+++N I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185

Query: 182 NIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVL 241
            I++K++CD G   +A  +M +M+  G+    + +TT++S+ YK  + E+++ LWN MV 
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245

Query: 242 RGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDM 301
           +GC  + A++NVRI     +       +L+  M ++G+ PD ++YN ++  +C+ G LD 
Sbjct: 246 KGCELDNAAYNVRIMSA-QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305

Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 361
           AK+VY  L G+   PN   ++T+I +LC S  +   Y + K ++  +  P+ +T+  L+ 
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365

Query: 362 GLNKMGQPGRAQLILTLARKRVPP 384
           GL +  +   A+ ++   +K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380

[Close]
BLAST of Lsi07G004710 vs. Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 4.2e-52
Identity = 116/380 (30.53%), Postives = 208/380 (54.74%), Query Frame = 1 

Query: 2   LSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANA 61
           L+  P  R   +A+ I S D+   +      SK   + AL  LK+E+DP+++  + +A +
Sbjct: 17  LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76

Query: 62  HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFVIRIITLYGKVEM 121
                  +R AF   V  LA  + F  + +LL+   +  P  + E F    I LY +  M
Sbjct: 77  LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136

Query: 122 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 181
           + H+L  F D+  +   RTVKS NA+L   +  +D    +    E P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196

Query: 182 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 241
            ++K FC+ G  + +Y ++ EME+ GI+P+  ++  +IS FY  ++ +    +  +M  R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256

Query: 242 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 301
           G    ++++N+RIQ L  R+++ +A  L++ M + G+ P+ VTY+ +I GFC     + A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316

Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 361
           K+++  +   G KP+ + Y T+I+YLC+ GDF  A ++CK++M KNW P+   + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376

Query: 362 LNKMGQPGRAQLILTLARKR 381
           L K  +   A+ ++   +++
Sbjct: 377 LAKDSKVEEAKELIGQVKEK 391

[Close]
BLAST of Lsi07G004710 vs. Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.7e-51
Identity = 115/373 (30.83%), Postives = 196/373 (52.55%), Query Frame = 1 

Query: 6   PIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV++      A ++  Q S      +LV    ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVVSEPTAVTAAISPPQKSLT----SLVN--GERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHAL 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII+LYGK  M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKA 185
             F +M    C+R+V SFNA+L     ++    +E    E P K +I+ DI+S N ++KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPN 245
            C+   L  A  L+ E+E  G++PD+VT+ TL+ + Y   Q E+   +W  MV +    +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255

Query: 246 LASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYS 305
           + ++N R+  L +  ++ +   L   ++  G+ PD  ++N +I+G    G +D A+  Y 
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315

Query: 306 ALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMG 365
            +   GY+P+   +  ++  +C++GDF  A  + K+  +K +     T+  L+  L K  
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375

Query: 366 QPGRAQLILTLAR 379
           +   A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382

[Close]
BLAST of Lsi07G004710 vs. Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-47
Identity = 112/372 (30.11%), Postives = 186/372 (50.00%), Query Frame = 1 

Query: 8   RRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKL-KAERDPEKLFHLFKANAHNRLV 67
           RRF  A T  A+T +               +P+L+ L   ERDP+ +   FK        
Sbjct: 21  RRFFSAVTAAAATPSPP-------------KPSLITLVNDERDPKFITEKFKKACQAEWF 80

Query: 68  IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHALD 127
            +N   +E TV RLA A++F+++E +LE Q   P   +EGFV RII LYG+V M ++A  
Sbjct: 81  RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140

Query: 128 TFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKAF 187
            F +M    C+RT  SFNA+L   + ++    +E    E P K +IE D+ S N ++K  
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200

Query: 188 CDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPNL 247
           C  G    A  L+ E+E  G++PD +T+  L+   Y   + E    +W  MV +    ++
Sbjct: 201 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 260

Query: 248 ASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYSA 307
            S+N R+  L    ++ +   L + ++   + PD  T+  +IKGF   G LD A   Y  
Sbjct: 261 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 320

Query: 308 LHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMGQ 367
           +  +G +P   ++ +++  +C++GD   AY +CK+   K    +   +  ++  L K  +
Sbjct: 321 IEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK 379

Query: 368 PGRAQLILTLAR 379
              A+ I+ LA+
Sbjct: 381 QDEAEEIVELAK 379

[Close]
BLAST of Lsi07G004710 vs. TrEMBL
Match: A0A0A0KTI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004890 PE=4 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 1.3e-204
Identity = 356/395 (90.13%), Postives = 374/395 (94.68%), Query Frame = 1 

Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI STDTTAAVLNHVQNSK +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF+IRII LYGK EM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
           IKHALDTFYDMHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL+EAPEKF+IELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLLMLEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GCLPNL +FNVRIQ+LI+RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+S DFNLA+T+CKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALKNS 396
           LNKMG+ G+AQLIL LARKRVPPFS  QLEAL  +
Sbjct: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTT 395

[Close]
BLAST of Lsi07G004710 vs. TrEMBL
Match: M5XC76_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006834mg PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.3e-172
Identity = 293/384 (76.30%), Postives = 338/384 (88.02%), Query Frame = 1 

Query: 10  FCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANAHNRLVIEN 69
           FCHAA  I S    AAV NHV ++K +EEPALVKLKAERDPEKLFHLFKANAHN LVIEN
Sbjct: 4   FCHAAIAITSNGCPAAVSNHVFDTKPLEEPALVKLKAERDPEKLFHLFKANAHNTLVIEN 63

Query: 70  RFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHALDTFY 129
           RFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF++RIITLYGK  M KHA+DTF 
Sbjct: 64  RFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIMRIITLYGKAGMTKHAIDTFC 123

Query: 130 DMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKAFCDL 189
           DMHLYGC RTVKSFNA LKVL +TRDLGA+EAFL E P+KF+IE+D+ SVNI++KAFC++
Sbjct: 124 DMHLYGCCRTVKSFNAALKVLTQTRDLGAIEAFLNEVPQKFDIEVDVFSVNILIKAFCEM 183

Query: 190 GILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPNLASF 249
           GIL +AY +M+EMEK+GIRPDV+TYTTL+SAFYK N CEI NGLWNLMVL+ CLPNLA+F
Sbjct: 184 GILVKAYRIMVEMEKLGIRPDVITYTTLMSAFYKENWCEIGNGLWNLMVLKRCLPNLATF 243

Query: 250 NVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYSALHG 309
           NVRIQYL++RRRAW+ANKLM +M+N+GI PDEVTYNLVIKGF QA +L+MAKRVYSALHG
Sbjct: 244 NVRIQYLVNRRRAWEANKLMGLMQNVGITPDEVTYNLVIKGFFQARYLEMAKRVYSALHG 303

Query: 310 SGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMGQPGR 369
             YKPN+KIYQTMIHYLC+ GDF+LAYTMCKD M KNW+PN+DTIH+LL+GL +  Q G+
Sbjct: 304 KAYKPNIKIYQTMIHYLCKGGDFDLAYTMCKDCMQKNWYPNVDTIHTLLEGLKRGKQLGK 363

Query: 370 AQLILTLARKRVPPFSTTQLEALK 394
           A+ I+ L RKRVPPFS+ QL  L+
Sbjct: 364 AKAIMMLVRKRVPPFSSKQLGDLQ 387

[Close]
BLAST of Lsi07G004710 vs. TrEMBL
Match: W9RC69_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025797 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 2.8e-167
Identity = 285/398 (71.61%), Postives = 342/398 (85.93%), Query Frame = 1 

Query: 1   MLSLRPIRRFCHAATVIAST----DTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHL 60
           MLSLRPIRRFCHAA   +++    D ++AV N V N K +EEPALVKLKAERDP+KLFHL
Sbjct: 1   MLSLRPIRRFCHAAAPASASAALKDCSSAVSNKVFNPKELEEPALVKLKAERDPDKLFHL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYG 120
           FKANAHNR+V+ENRFAFEDTV+RLAGA+RFDYIEHLLEHQKTLPQGRREGF++RII LYG
Sbjct: 61  FKANAHNRIVVENRFAFEDTVARLAGAQRFDYIEHLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KVEMIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDI 180
           K  M ++A+ TFYDMHLYGCRRTVKSFNA L+VL + RDL A+E F+ E P KF+I+LDI
Sbjct: 121 KAGMTENAIRTFYDMHLYGCRRTVKSFNAALRVLTQLRDLRAIEDFVREVPSKFDIQLDI 180

Query: 181 ISVNIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNL 240
            SVNIVVKAFCD+G L++AYL+M+EM K+GI PDV+TYTTL+SAFYK N+ EI NGLWNL
Sbjct: 181 FSVNIVVKAFCDMGDLDKAYLIMVEMGKMGISPDVITYTTLMSAFYKHNRYEIGNGLWNL 240

Query: 241 MVLRGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGF 300
           MVLRGCLPNLA+FNVRIQYL+ +RRAW+AN++M++MR +GI PDEVT+NLVIKGFCQA +
Sbjct: 241 MVLRGCLPNLATFNVRIQYLVCKRRAWEANRVMSLMRTLGIAPDEVTFNLVIKGFCQAEY 300

Query: 301 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHS 360
            DMAKR YSA    GYKPN KIYQTMIHYLC+ GDF +AYTMCKD+M KNWFP++DTI+ 
Sbjct: 301 FDMAKRAYSAFRSRGYKPNAKIYQTMIHYLCKEGDFGVAYTMCKDSMQKNWFPSVDTIYE 360

Query: 361 LLKGLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           LL+GL K G+ G+A+ I+TLARKRVPP+   +L AL++
Sbjct: 361 LLEGLKKSGKLGKAEAIMTLARKRVPPYPRDKLAALES 398

[Close]
BLAST of Lsi07G004710 vs. TrEMBL
Match: B9RV44_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0898900 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 1.0e-166
Identity = 289/390 (74.10%), Postives = 344/390 (88.21%), Query Frame = 1 

Query: 1   MLSLRPIRRFCH-AATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKA 60
           MLSLRPIRRFC+ AA  I+STD+ AAV N V N K +EEPAL KLKAERDPEKLF+LFKA
Sbjct: 1   MLSLRPIRRFCYSAAAAISSTDSPAAVSNRVLNQKPLEEPALAKLKAERDPEKLFNLFKA 60

Query: 61  NAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVE 120
           NA NRLVIENRFAFEDT+SRLAGARRFDYIEHLLEHQKTLPQGRREGF+IRII LYGK  
Sbjct: 61  NARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAG 120

Query: 121 MIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISV 180
           M KHA+DTF DMH+YGC+RTVKSFNA LKVL +T DL A++AFL+E PEKF+I LDI SV
Sbjct: 121 MTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPEKFDIILDIFSV 180

Query: 181 NIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVL 240
           NI++KAFC + IL++AYL+M++ME++GIRPDVVTYTTLISAFYK ++ EISNGLWNLMVL
Sbjct: 181 NIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEISNGLWNLMVL 240

Query: 241 RGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDM 300
           +GCLPNL++FNVRIQ+L++ R++W AN++M +M  IGI PDEVTYNLVIKGF QAG+L+M
Sbjct: 241 KGCLPNLSTFNVRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNLVIKGFGQAGYLEM 300

Query: 301 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 360
           A+RVYSALHG GYKPNVKIYQTMIH LC+ G+F+LAYTMCKD M K+WF N+DTIH+LL 
Sbjct: 301 ARRVYSALHGKGYKPNVKIYQTMIHCLCKGGEFDLAYTMCKDCMKKSWFLNVDTIHTLLD 360

Query: 361 GLNKMGQPGRAQLILTLARKRVPPFSTTQL 390
           GL K GQ  +A++I+TLA++R+PPFS+ QL
Sbjct: 361 GLKKNGQLDKAKMIVTLAQRRMPPFSSKQL 390

[Close]
BLAST of Lsi07G004710 vs. TrEMBL
Match: A0A061FTX6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_011927 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 1.2e-165
Identity = 285/395 (72.15%), Postives = 338/395 (85.57%), Query Frame = 1 

Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSL+ IRRFCHAA++ ++TDT A V   + +   ++E AL KLKAERDP+KLF LFKAN
Sbjct: 1   MLSLQAIRRFCHAASIASTTDTFAVVSKQLPSKIPLQESALSKLKAERDPDKLFILFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHN++VIENRFAFEDTVSRLAGAR FDYIEHLLEHQKTLPQGRREGF++RII LYGK  M
Sbjct: 61  AHNKVVIENRFAFEDTVSRLAGARHFDYIEHLLEHQKTLPQGRREGFIMRIIMLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
           IKHAL+TFYDMHLYGC RTVKSFNA LKVL++T D+ A+EAFL++ P+KFN+ELD  SVN
Sbjct: 121 IKHALNTFYDMHLYGCERTVKSFNAALKVLIQTHDIRAIEAFLSDVPQKFNVELDTYSVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           IVVKAFC++  L RAYL+M+EMEK+GIRPDV+TYTTLIS FY+ N+ EI NGLWNLMV +
Sbjct: 181 IVVKAFCEMDFLERAYLVMVEMEKLGIRPDVITYTTLISTFYQKNRWEIGNGLWNLMVYK 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GC PNL +FNVRIQYL++RRRAW AN LM +MR IGIVPDEVTYNLVIKGFC AG+L+MA
Sbjct: 241 GCKPNLTTFNVRIQYLVNRRRAWQANDLMRLMRKIGIVPDEVTYNLVIKGFCLAGYLEMA 300

Query: 301 KRVYSALH-GSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 360
           KRVYS+L     Y+PN+KIYQTMIHYLC+ GD+NLAYTMCKD M KNWF N+DTI SLL+
Sbjct: 301 KRVYSSLEFCREYRPNIKIYQTMIHYLCKGGDYNLAYTMCKDCMRKNWFLNVDTIRSLLE 360

Query: 361 GLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           GL K GQ G+A++I+ L R RVPPFS+TQL+ L++
Sbjct: 361 GLIKNGQLGKAKMIMKLVRSRVPPFSSTQLDTLQS 395

[Close]
BLAST of Lsi07G004710 vs. TAIR10
Match: AT1G80150.1 (AT1G80150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 526.6 bits (1355), Expect = 1.4e-149
Identity = 260/398 (65.33%), Postives = 316/398 (79.40%), Query Frame = 1 

Query: 1   MLSLRPIRRFCH----AATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHL 60
           MLSLR IRRFCH    AAT IA   T +   N +Q  K +EEPALVKLK+ERDPEKL++L
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES---NQIQGLKPLEEPALVKLKSERDPEKLYNL 60

Query: 61  FKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYG 120
           FKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGF++RII LYG
Sbjct: 61  FKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYG 120

Query: 121 KVEMIKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDI 180
           K  M K ALDTF++M LYGC+R+VKSFNA L+VL    DL  +  FL +AP K+ I++D 
Sbjct: 121 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 180

Query: 181 ISVNIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNL 240
           +S NI +K+FC+LGIL+ AY+ M EMEK G+ PDVVTYTTLISA YK  +C I NGLWNL
Sbjct: 181 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 240

Query: 241 MVLRGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGF 300
           MVL+GC PNL +FNVRIQ+L++RRRAWDAN L+ +M  + + PD +TYN+VIKGF  A F
Sbjct: 241 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 300

Query: 301 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHS 360
            DMA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+LAYTMCKD M K W+PN+DT+  
Sbjct: 301 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 360

Query: 361 LLKGLNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           LLKGL K GQ  +A+ I+ L  +RVPPF + QL +LK+
Sbjct: 361 LLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKS 395

[Close]
BLAST of Lsi07G004710 vs. TAIR10
Match: AT4G36680.1 (AT4G36680.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 218.8 bits (556), Expect = 6.1e-57
Identity = 126/384 (32.81%), Postives = 210/384 (54.69%), Query Frame = 1 

Query: 2   LSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA   A   TTA     +  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+  M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFN-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + +++   +     E P+++N I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185

Query: 182 NIVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVL 241
            I++K++CD G   +A  +M +M+  G+    + +TT++S+ YK  + E+++ LWN MV 
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245

Query: 242 RGCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDM 301
           +GC  + A++NVRI     +       +L+  M ++G+ PD ++YN ++  +C+ G LD 
Sbjct: 246 KGCELDNAAYNVRIMSA-QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305

Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 361
           AK+VY  L G+   PN   ++T+I +LC S  +   Y + K ++  +  P+ +T+  L+ 
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365

Query: 362 GLNKMGQPGRAQLILTLARKRVPP 384
           GL +  +   A+ ++   +K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380

[Close]
BLAST of Lsi07G004710 vs. TAIR10
Match: AT1G61870.1 (AT1G61870.1 pentatricopeptide repeat 336)

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-53
Identity = 116/380 (30.53%), Postives = 208/380 (54.74%), Query Frame = 1 

Query: 2   LSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANA 61
           L+  P  R   +A+ I S D+   +      SK   + AL  LK+E+DP+++  + +A +
Sbjct: 17  LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76

Query: 62  HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFVIRIITLYGKVEM 121
                  +R AF   V  LA  + F  + +LL+   +  P  + E F    I LY +  M
Sbjct: 77  LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136

Query: 122 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 181
           + H+L  F D+  +   RTVKS NA+L   +  +D    +    E P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196

Query: 182 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 241
            ++K FC+ G  + +Y ++ EME+ GI+P+  ++  +IS FY  ++ +    +  +M  R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256

Query: 242 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 301
           G    ++++N+RIQ L  R+++ +A  L++ M + G+ P+ VTY+ +I GFC     + A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316

Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 361
           K+++  +   G KP+ + Y T+I+YLC+ GDF  A ++CK++M KNW P+   + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376

Query: 362 LNKMGQPGRAQLILTLARKR 381
           L K  +   A+ ++   +++
Sbjct: 377 LAKDSKVEEAKELIGQVKEK 391

[Close]
BLAST of Lsi07G004710 vs. TAIR10
Match: AT1G55890.1 (AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-52
Identity = 115/373 (30.83%), Postives = 196/373 (52.55%), Query Frame = 1 

Query: 6   PIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV++      A ++  Q S      +LV    ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVVSEPTAVTAAISPPQKSLT----SLVN--GERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHAL 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII+LYGK  M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKA 185
             F +M    C+R+V SFNA+L     ++    +E    E P K +I+ DI+S N ++KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPN 245
            C+   L  A  L+ E+E  G++PD+VT+ TL+ + Y   Q E+   +W  MV +    +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255

Query: 246 LASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYS 305
           + ++N R+  L +  ++ +   L   ++  G+ PD  ++N +I+G    G +D A+  Y 
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315

Query: 306 ALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMG 365
            +   GY+P+   +  ++  +C++GDF  A  + K+  +K +     T+  L+  L K  
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375

Query: 366 QPGRAQLILTLAR 379
           +   A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382

[Close]
BLAST of Lsi07G004710 vs. TAIR10
Match: AT3G13160.1 (AT3G13160.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 191.8 bits (486), Expect = 7.9e-49
Identity = 112/372 (30.11%), Postives = 186/372 (50.00%), Query Frame = 1 

Query: 8   RRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKL-KAERDPEKLFHLFKANAHNRLV 67
           RRF  A T  A+T +               +P+L+ L   ERDP+ +   FK        
Sbjct: 21  RRFFSAVTAAAATPSPP-------------KPSLITLVNDERDPKFITEKFKKACQAEWF 80

Query: 68  IENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEMIKHALD 127
            +N   +E TV RLA A++F+++E +LE Q   P   +EGFV RII LYG+V M ++A  
Sbjct: 81  RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 140

Query: 128 TFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVNIVVKAF 187
            F +M    C+RT  SFNA+L   + ++    +E    E P K +IE D+ S N ++K  
Sbjct: 141 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 200

Query: 188 CDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLRGCLPNL 247
           C  G    A  L+ E+E  G++PD +T+  L+   Y   + E    +W  MV +    ++
Sbjct: 201 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 260

Query: 248 ASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMAKRVYSA 307
            S+N R+  L    ++ +   L + ++   + PD  T+  +IKGF   G LD A   Y  
Sbjct: 261 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 320

Query: 308 LHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLNKMGQ 367
           +  +G +P   ++ +++  +C++GD   AY +CK+   K    +   +  ++  L K  +
Sbjct: 321 IEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSK 379

Query: 368 PGRAQLILTLAR 379
              A+ I+ LA+
Sbjct: 381 QDEAEEIVELAK 379

[Close]
BLAST of Lsi07G004710 vs. NCBI nr
Match: gi|449468996|ref|XP_004152207.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucumis sativus])

HSP 1 Score: 720.3 bits (1858), Expect = 1.8e-204
Identity = 356/395 (90.13%), Postives = 374/395 (94.68%), Query Frame = 1 

Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI STDTTAAVLNHVQNSK +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF+IRII LYGK EM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
           IKHALDTFYDMHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL+EAPEKF+IELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLLMLEMEK+GI+PDVVTYTTLISA YK  Q EISNGLWNLMVLR
Sbjct: 181 ILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GCLPNL +FNVRIQ+LI+RRRAWDANKLM +MRNIGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 241 GCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+S DFNLA+T+CKDAMNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALKNS 396
           LNKMG+ G+AQLIL LARKRVPPFS  QLEAL  +
Sbjct: 361 LNKMGEAGKAQLILALARKRVPPFSKNQLEALNTT 395

[Close]
BLAST of Lsi07G004710 vs. NCBI nr
Match: gi|659108995|ref|XP_008454493.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucumis melo])

HSP 1 Score: 720.3 bits (1858), Expect = 1.8e-204
Identity = 355/395 (89.87%), Postives = 375/395 (94.94%), Query Frame = 1 

Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVI ST TTAAVLNHVQNSK +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 530 MLSLRPIRRFCHAATVIPSTGTTAAVLNHVQNSKALEEPALVKLKAERDPEKLFHLFKAN 589

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF+IRII LYGK EM
Sbjct: 590 AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 649

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
           IKHALDTFYDMHLYGC RTVKSFNAVLKVLMK+RDLGALEAFL EAPEKF+IELDIISVN
Sbjct: 650 IKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLNEAPEKFDIELDIISVN 709

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           I+VKAFCD G LNRAYLLML+MEK+GI+PDVVTYTTLISA YK  + EISNGLWNLMVLR
Sbjct: 710 ILVKAFCDFGFLNRAYLLMLDMEKLGIKPDVVTYTTLISASYKDRRSEISNGLWNLMVLR 769

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GCLPNL +FNVRIQ+LI+RRRAWDANKLM VMR+IGIVPDEVTYNLVIKGFCQAG LDMA
Sbjct: 770 GCLPNLTTFNVRIQHLIERRRAWDANKLMKVMRSIGIVPDEVTYNLVIKGFCQAGLLDMA 829

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLC+SGDFNLA+T+CKDAMNKNWFPNIDTIHSLLKG
Sbjct: 830 KRVYSALHGSGYKPNVKIYQTMIHYLCKSGDFNLAHTICKDAMNKNWFPNIDTIHSLLKG 889

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALKNS 396
           LNKMGQ G+AQLIL+LARKR+PPFS TQLEAL  +
Sbjct: 890 LNKMGQAGKAQLILSLARKRIPPFSKTQLEALNTT 924

[Close]
BLAST of Lsi07G004710 vs. NCBI nr
Match: gi|1009112957|ref|XP_015870951.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 644.4 bits (1661), Expect = 1.3e-181
Identity = 307/394 (77.92%), Postives = 354/394 (89.85%), Query Frame = 1 

Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFC+AATV+AS+D  AA+ NHV ++K +EEPAL+KLKAERDPEKLF LFKAN
Sbjct: 1   MLSLRPIRRFCNAATVLASSDCRAAISNHVLSTKRLEEPALLKLKAERDPEKLFQLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNR+VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQG REGF++RII LYGK  M
Sbjct: 61  AHNRIVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGWREGFIVRIIMLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
            KHA+DTFYDMHLYGCRRTVKSFNA LKVL  T DLGA+EAFL E P KF+IELD+ SVN
Sbjct: 121 TKHAVDTFYDMHLYGCRRTVKSFNAALKVLTLTCDLGAIEAFLKEVPSKFDIELDVFSVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           IV+KA+C++GILN+AYL+M+EM KVGIRPDVVTYTTL+SAFYK N+ EI NGLWNLMVLR
Sbjct: 181 IVIKAYCEMGILNKAYLIMVEMAKVGIRPDVVTYTTLMSAFYKHNRWEIGNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
            C PNLA+FNVRIQYL++RRRAW+AN++M +M N+GI PDEVTYNLVIKGFCQ+G+L+MA
Sbjct: 241 RCSPNLATFNVRIQYLVNRRRAWEANRVMRIMPNVGITPDEVTYNLVIKGFCQSGYLEMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHG GYKPN KIYQTMIHYLC+ GDF+LAYTMCKD + KNWFPNIDTIH+LL+G
Sbjct: 301 KRVYSALHGKGYKPNAKIYQTMIHYLCKGGDFDLAYTMCKDCLQKNWFPNIDTIHTLLEG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALKN 395
           L K GQ G+A+ I+ LAR+RVPPFS+ QL AL++
Sbjct: 361 LRKTGQLGKARAIMALARRRVPPFSSDQLGALQS 394

[Close]
BLAST of Lsi07G004710 vs. NCBI nr
Match: gi|645277333|ref|XP_008243722.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Prunus mume])

HSP 1 Score: 629.4 bits (1622), Expect = 4.2e-177
Identity = 301/393 (76.59%), Postives = 347/393 (88.30%), Query Frame = 1 

Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLR  RRFCHAA  I S    AAV NHV ++K +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRTSRRFCHAAIAITSNGCPAAVSNHVFDTKPLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHN LVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGF++RIITLYGK  M
Sbjct: 61  AHNTLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIMRIITLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
            KHA+DTF DMHLYGC RTVKSFNA LKVL +TRDLGA+EAFL E P+KF+IE+D+ SVN
Sbjct: 121 TKHAIDTFCDMHLYGCCRTVKSFNAALKVLTQTRDLGAIEAFLNEVPQKFDIEVDVFSVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           I++KAFC++GIL +AY +M+EMEK+GIRPDV+TYTTL+SAFYK N CEI NGLWNLMVL+
Sbjct: 181 ILIKAFCEMGILVKAYRIMVEMEKLGIRPDVITYTTLMSAFYKENWCEIGNGLWNLMVLK 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
            CLPNLA+FNVRIQYL++RRRAW+ANKLM +M+N+GI PDEVTYNLVIKGF QAG+L+MA
Sbjct: 241 RCLPNLATFNVRIQYLVNRRRAWEANKLMGLMQNVGITPDEVTYNLVIKGFFQAGYLEMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHG GYKPN+KIYQTMIHYLC+ GDF+LAYTMCKD M KNW+PN+DTIH+LL+G
Sbjct: 301 KRVYSALHGKGYKPNIKIYQTMIHYLCKGGDFDLAYTMCKDCMQKNWYPNVDTIHTLLEG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALK 394
           L +  Q G+A+ I+ L RKRVPPFS+ Q+  L+
Sbjct: 361 LKRGKQLGKAKAIMMLVRKRVPPFSSKQVGDLQ 393

[Close]
BLAST of Lsi07G004710 vs. NCBI nr
Match: gi|657964728|ref|XP_008373998.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Malus domestica])

HSP 1 Score: 626.3 bits (1614), Expect = 3.6e-176
Identity = 302/393 (76.84%), Postives = 344/393 (87.53%), Query Frame = 1 

Query: 1   MLSLRPIRRFCHAATVIASTDTTAAVLNHVQNSKLVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLR  RRFC+AA  I S D  AA  N V N+K +EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRTSRRFCNAAIAITSNDCPAAASNRVLNTKPLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFVIRIITLYGKVEM 120
           AHNRLVIENRFAF+D VSRLAGA RFDYIEHLLEHQK+LPQGRREGF++RIITLYGK  M
Sbjct: 61  AHNRLVIENRFAFDDMVSRLAGAHRFDYIEHLLEHQKSLPQGRREGFIMRIITLYGKAGM 120

Query: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLTEAPEKFNIELDIISVN 180
            KHA+DTF DMHLYGC RTVKSFNA LKVL +TRDLGALEAFL+E PEKF+IELDI SVN
Sbjct: 121 TKHAIDTFCDMHLYGCSRTVKSFNAALKVLTQTRDLGALEAFLSEIPEKFDIELDIYSVN 180

Query: 181 IVVKAFCDLGILNRAYLLMLEMEKVGIRPDVVTYTTLISAFYKVNQCEISNGLWNLMVLR 240
           IV+KAFC++GIL +AY +M++MEK+GI+PDV+TYTTL+SAFYK N+ EI NGLWNLM+L+
Sbjct: 181 IVIKAFCEMGILVKAYQIMVQMEKLGIKPDVITYTTLMSAFYKDNRWEIGNGLWNLMILK 240

Query: 241 GCLPNLASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300
           GCLPNLA+FNVRIQYL+ RRRAW+AN+LM +M+NI I PDEVTYNLVIKGFCQAG+L+MA
Sbjct: 241 GCLPNLATFNVRIQYLVYRRRAWEANRLMGLMQNIEITPDEVTYNLVIKGFCQAGYLEMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHG GYKPNVKIYQTMIHYLC+ GDF+LAYTMCKD M KNWFPN+DTI +LL+G
Sbjct: 301 KRVYSALHGKGYKPNVKIYQTMIHYLCKGGDFDLAYTMCKDCMQKNWFPNVDTIRTLLEG 360

Query: 361 LNKMGQPGRAQLILTLARKRVPPFSTTQLEALK 394
           L K  Q G+A+ I+ L RKR PPFST QL  L+
Sbjct: 361 LKKANQLGKAKAIMMLVRKRAPPFSTKQLGVLQ 393

The following BLAST results are available for this feature:
BLAST of Lsi07G004710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP134_ARATH2.4e-14865.33Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop... [more]
PP352_ARATH1.1e-5532.81Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop... [more]
PPR87_ARATH4.2e-5230.53Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop... [more]
PPR82_ARATH2.7e-5130.83Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop... [more]
PP226_ARATH1.4e-4730.11Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop... [more]
BLAST of Lsi07G004710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTI5_CUCSA1.3e-20490.13Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004890 PE=4 SV=1[more]
M5XC76_PRUPE1.3e-17276.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006834mg PE=4 SV=1[more]
W9RC69_9ROSA2.8e-16771.61Uncharacterized protein OS=Morus notabilis GN=L484_025797 PE=4 SV=1[more]
B9RV44_RICCO1.0e-16674.10Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A061FTX6_THECC1.2e-16572.15Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TC... [more]
BLAST of Lsi07G004710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80150.11.4e-14965.33 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G36680.16.1e-5732.81 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G61870.12.4e-5330.53 pentatricopeptide repeat 336[more]
AT1G55890.11.5e-5230.83 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13160.17.9e-4930.11 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Lsi07G004710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468996|ref|XP_004152207.1|1.8e-20490.13PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ... [more]
gi|659108995|ref|XP_008454493.1|1.8e-20489.87PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial ... [more]
gi|1009112957|ref|XP_015870951.1|1.3e-18177.92PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ... [more]
gi|645277333|ref|XP_008243722.1|4.2e-17776.59PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial ... [more]
gi|657964728|ref|XP_008373998.1|3.6e-17676.84PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Malus domestic... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043686 co-translational protein modification
biological_process GO:0006412 translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009505 plant-type cell wall
molecular_function GO:0003674 molecular_function
molecular_function GO:0005506 iron ion binding
molecular_function GO:0042586 peptide deformylase activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G004710.1Lsi07G004710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 111..136
score: 1.3coord: 318..341
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 244..293
score: 1.7E-9coord: 175..223
score: 8.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 178..211
score: 0.0024coord: 318..350
score: 3.1E-5coord: 282..316
score: 4.8E-7coord: 212..245
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 210..244
score: 9.668coord: 280..314
score: 12.2coord: 139..169
score: 5.24coord: 175..209
score: 9.997coord: 315..349
score: 8.988coord: 350..380
score: 5.777coord: 245..279
score: 7
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 31..392
score: 6.8E
NoneNo IPR availablePANTHERPTHR24015:SF439SUBFAMILY NOT NAMEDcoord: 31..392
score: 6.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G004710Cucsa.096520Cucumber (Gy14) v1cgylsiB113
Lsi07G004710CmaCh14G013440Cucurbita maxima (Rimu)cmalsiB256
Lsi07G004710CmaCh01G001350Cucurbita maxima (Rimu)cmalsiB450
Lsi07G004710CmoCh14G013710Cucurbita moschata (Rifu)cmolsiB244
Lsi07G004710CmoCh01G001430Cucurbita moschata (Rifu)cmolsiB437
Lsi07G004710Cp4.1LG02g14920Cucurbita pepo (Zucchini)cpelsiB472
Lsi07G004710Cp4.1LG03g13800Cucurbita pepo (Zucchini)cpelsiB516
Lsi07G004710Carg06503Silver-seed gourdcarlsiB109
Lsi07G004710Carg04236Silver-seed gourdcarlsiB182
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G004710Watermelon (97103) v2lsiwmbB403
Lsi07G004710Watermelon (97103) v2lsiwmbB405
Lsi07G004710Watermelon (97103) v2lsiwmbB417
Lsi07G004710Watermelon (97103) v2lsiwmbB420
Lsi07G004710Wax gourdlsiwgoB546
Lsi07G004710Wax gourdlsiwgoB568
Lsi07G004710Wax gourdlsiwgoB577
Lsi07G004710Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi07G004710Bottle gourd (USVL1VR-Ls)lsilsiB164
Lsi07G004710Bottle gourd (USVL1VR-Ls)lsilsiB167
Lsi07G004710Cucumber (Gy14) v1cgylsiB136
Lsi07G004710Cucumber (Gy14) v1cgylsiB266
Lsi07G004710Cucurbita maxima (Rimu)cmalsiB081
Lsi07G004710Cucurbita maxima (Rimu)cmalsiB736
Lsi07G004710Cucurbita moschata (Rifu)cmolsiB068
Lsi07G004710Cucurbita moschata (Rifu)cmolsiB137
Lsi07G004710Cucurbita moschata (Rifu)cmolsiB174
Lsi07G004710Cucurbita moschata (Rifu)cmolsiB349
Lsi07G004710Cucurbita moschata (Rifu)cmolsiB727
Lsi07G004710Cucurbita pepo (Zucchini)cpelsiB127
Lsi07G004710Wild cucumber (PI 183967)cpilsiB136
Lsi07G004710Wild cucumber (PI 183967)cpilsiB137
Lsi07G004710Wild cucumber (PI 183967)cpilsiB311
Lsi07G004710Wild cucumber (PI 183967)cpilsiB546
Lsi07G004710Cucumber (Chinese Long) v2culsiB138
Lsi07G004710Cucumber (Chinese Long) v2culsiB137
Lsi07G004710Cucumber (Chinese Long) v2culsiB312
Lsi07G004710Cucumber (Chinese Long) v2culsiB532
Lsi07G004710Melon (DHL92) v3.5.1lsimeB430
Lsi07G004710Melon (DHL92) v3.5.1lsimeB435
Lsi07G004710Melon (DHL92) v3.5.1lsimeB442
Lsi07G004710Melon (DHL92) v3.5.1lsimeB447
Lsi07G004710Watermelon (Charleston Gray)lsiwcgB387
Lsi07G004710Watermelon (Charleston Gray)lsiwcgB392
Lsi07G004710Watermelon (Charleston Gray)lsiwcgB404
Lsi07G004710Watermelon (Charleston Gray)lsiwcgB406
Lsi07G004710Watermelon (Charleston Gray)lsiwcgB418
Lsi07G004710Watermelon (97103) v1lsiwmB426
Lsi07G004710Watermelon (97103) v1lsiwmB432
Lsi07G004710Watermelon (97103) v1lsiwmB438
Lsi07G004710Watermelon (97103) v1lsiwmB461
Lsi07G004710Cucumber (Gy14) v2cgyblsiB285
Lsi07G004710Cucumber (Gy14) v2cgyblsiB502
Lsi07G004710Melon (DHL92) v3.6.1lsimedB455
Lsi07G004710Melon (DHL92) v3.6.1lsimedB451
Lsi07G004710Melon (DHL92) v3.6.1lsimedB461
Lsi07G004710Melon (DHL92) v3.6.1lsimedB465
Lsi07G004710Silver-seed gourdcarlsiB520
Lsi07G004710Silver-seed gourdcarlsiB939
Lsi07G004710Cucumber (Chinese Long) v3cuclsiB150
Lsi07G004710Cucumber (Chinese Long) v3cuclsiB148
Lsi07G004710Cucumber (Chinese Long) v3cuclsiB331
Lsi07G004710Cucumber (Chinese Long) v3cuclsiB568