Lsi07G004250.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G004250.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Adenylate cyclase
Location	chr07 : 4500641 .. 4501423 (+)
Sequence length	783

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTCCGGTTGATTCCAAATTCCGGCCACTCCTTCCATCTCCGCCGCAATCGCAGCCCATTCCTCCTCTTCACCAACAATCTCCATCGCCGACCAATTTTCCACATCCCCTCTCTTTCACTCCGCCCCACAAAACGCTTCTCCAACCCAAATGAACCACCACCGCCAATGGAGGTCGAAATCAAGCTCCGCCTCCCCGACTCTTCCTCTCACCACAAACTCTCCCACCTCCTCTCCTCTCACCACATCAAAACTCACAATCAACACAACATCTTCTTCGACGGCCCCAACGCCGAGCTCTCCTCCAACCAAGCCGTCCTCCGGATCCGATTCTACGACGATGACAGCCATTGCGTTCTCTCTCTCAAAGCTAAACCTACAATCTCAGATGGAATCAGCCGCATCGAGGAGGAGGAAGAGCCGGTGGTGCCGTCGATCGGCCGCGCCTGCGTTGAGGAGCCGAATCGGATGCTGTTGATGATGGAATGGTCGAAGATTGTGGAGAAAGTGAAAGATAAGTATGAGATTGATGGGTTCGTGTGCTTGGGGGGATTCAGGAATGTGAGAAGAGTATATGAATGGAAGGGATTGAAATTGGAATTGGATGAAACGATTTTCGATTTCGGAAGGAATTATGAGTTGGAATGCGAGAGTGAAGAACCGGAAGAAGATAGGGATTTGTTGGAAGGGTTTTTGAAGGAGAATGGAATTCCTTATTCATATTCCCATATTTCCAAATTCGCCATTTTCCGATCTGGGAAGTTGCCGCCATGCTTCTGA

mRNA sequence

ATGAGTCTCCGGTTGATTCCAAATTCCGGCCACTCCTTCCATCTCCGCCGCAATCGCAGCCCATTCCTCCTCTTCACCAACAATCTCCATCGCCGACCAATTTTCCACATCCCCTCTCTTTCACTCCGCCCCACAAAACGCTTCTCCAACCCAAATGAACCACCACCGCCAATGGAGGTCGAAATCAAGCTCCGCCTCCCCGACTCTTCCTCTCACCACAAACTCTCCCACCTCCTCTCCTCTCACCACATCAAAACTCACAATCAACACAACATCTTCTTCGACGGCCCCAACGCCGAGCTCTCCTCCAACCAAGCCGTCCTCCGGATCCGATTCTACGACGATGACAGCCATTGCGTTCTCTCTCTCAAAGCTAAACCTACAATCTCAGATGGAATCAGCCGCATCGAGGAGGAGGAAGAGCCGGTGGTGCCGTCGATCGGCCGCGCCTGCGTTGAGGAGCCGAATCGGATGCTGTTGATGATGGAATGGTCGAAGATTGTGGAGAAAGTGAAAGATAAGTATGAGATTGATGGGTTCGTGTGCTTGGGGGGATTCAGGAATGTGAGAAGAGTATATGAATGGAAGGGATTGAAATTGGAATTGGATGAAACGATTTTCGATTTCGGAAGGAATTATGAGTTGGAATGCGAGAGTGAAGAACCGGAAGAAGATAGGGATTTGTTGGAAGGGTTTTTGAAGGAGAATGGAATTCCTTATTCATATTCCCATATTTCCAAATTCGCCATTTTCCGATCTGGGAAGTTGCCGCCATGCTTCTGA

Coding sequence (CDS)

ATGAGTCTCCGGTTGATTCCAAATTCCGGCCACTCCTTCCATCTCCGCCGCAATCGCAGCCCATTCCTCCTCTTCACCAACAATCTCCATCGCCGACCAATTTTCCACATCCCCTCTCTTTCACTCCGCCCCACAAAACGCTTCTCCAACCCAAATGAACCACCACCGCCAATGGAGGTCGAAATCAAGCTCCGCCTCCCCGACTCTTCCTCTCACCACAAACTCTCCCACCTCCTCTCCTCTCACCACATCAAAACTCACAATCAACACAACATCTTCTTCGACGGCCCCAACGCCGAGCTCTCCTCCAACCAAGCCGTCCTCCGGATCCGATTCTACGACGATGACAGCCATTGCGTTCTCTCTCTCAAAGCTAAACCTACAATCTCAGATGGAATCAGCCGCATCGAGGAGGAGGAAGAGCCGGTGGTGCCGTCGATCGGCCGCGCCTGCGTTGAGGAGCCGAATCGGATGCTGTTGATGATGGAATGGTCGAAGATTGTGGAGAAAGTGAAAGATAAGTATGAGATTGATGGGTTCGTGTGCTTGGGGGGATTCAGGAATGTGAGAAGAGTATATGAATGGAAGGGATTGAAATTGGAATTGGATGAAACGATTTTCGATTTCGGAAGGAATTATGAGTTGGAATGCGAGAGTGAAGAACCGGAAGAAGATAGGGATTTGTTGGAAGGGTTTTTGAAGGAGAATGGAATTCCTTATTCATATTCCCATATTTCCAAATTCGCCATTTTCCGATCTGGGAAGTTGCCGCCATGCTTCTGA

Protein sequence

MSLRLIPNSGHSFHLRRNRSPFLLFTNNLHRRPIFHIPSLSLRPTKRFSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENGIPYSYSHISKFAIFRSGKLPPCF

Homology

[Close]

BLAST of Lsi07G004250.1 vs. Swiss-Prot
Match: TTM3_ARATH (Triphosphate tunel metalloenzyme 3 OS=Arabidopsis thaliana GN=TTM3 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-53
Identity = 106/212 (50.00%), Postives = 154/212 (72.64%), Query Frame = 1


Query: 58  MEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDS 117
           MEVE+KLRL  +++H +L+ LL+ +H+KT +Q N FFD P  +LS  +AVLR+RF  + +
Sbjct: 1   MEVEVKLRLLTAAAHLRLTTLLTPYHLKTLHQRNTFFDTPKNDLSLRRAVLRLRFLQNAA 60

Query: 118 ---------HCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIV 177
                     C++SLKAKPT+++GISR+EE+EE +   IG+ CVE P ++  +   S+++
Sbjct: 61  VSAASPSPPRCIVSLKAKPTLANGISRVEEDEEEIEYWIGKECVESPAKLSDI--GSRVL 120

Query: 178 EKVKDKYEID---GFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEED 237
           ++VK++Y  +   GFVCLGGF NVR VYEW+G+KLE+DET +DFG  YE+ECE+EEPE  
Sbjct: 121 KRVKEEYGFNDFLGFVCLGGFENVRNVYEWRGVKLEVDETKYDFGNCYEIECETEEPERV 180

Query: 238 RDLLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           + ++E FL E  I +S S ++KFA+FRSGKLP
Sbjct: 181 KTMIEEFLTEEKIEFSNSDMTKFAVFRSGKLP 210

[Close]

BLAST of Lsi07G004250.1 vs. TrEMBL
Match: A0A0A0KTP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006350 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 2.9e-104
Identity = 200/261 (76.63%), Postives = 217/261 (83.14%), Query Frame = 1


Query: 1   MSLRLIPNSGH-SFHLRRNRSPFLLFTNNLHRRPIFHIPSLSLRPTKRFSNPNEPPPPME 60
           MSLRL+PN GH S HLRRN               +FH    +LRPT +      PPPPME
Sbjct: 25  MSLRLLPNPGHPSLHLRRNCR-------------LFH----NLRPTNQ-----PPPPPME 84

Query: 61  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDSHC 120
           VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHN FFDGPNAELSSNQA LRIRFY++DSHC
Sbjct: 85  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNFFFDGPNAELSSNQAALRIRFYNEDSHC 144

Query: 121 VLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEIDG 180
           VLSLKAKPTISDGISRIEEEEE + PSIGRACVEEPNRM+LM E SKI+E+VK++Y IDG
Sbjct: 145 VLSLKAKPTISDGISRIEEEEEALEPSIGRACVEEPNRMMLMEE-SKILERVKEEYRIDG 204

Query: 181 FVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENGIP 240
           FVCLGGF+NVRRVY+WKGLKLELDETIF+FGRNYE+ECESE+ E DRDLLEGF KENGI 
Sbjct: 205 FVCLGGFKNVRRVYDWKGLKLELDETIFEFGRNYEMECESEDAERDRDLLEGFFKENGIS 262

Query: 241 YSYSHISKFAIFRSGKLPPCF 261
           YSYS  SK AIFRSGKLPP F
Sbjct: 265 YSYSQSSKLAIFRSGKLPPFF 262

[Close]

BLAST of Lsi07G004250.1 vs. TrEMBL
Match: A0A059AKC1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 136/210 (64.76%), Postives = 168/210 (80.00%), Query Frame = 1


Query: 48  FSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAV 107
           F NP     PMEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A 
Sbjct: 42  FPNPKSSSAPMEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAA 101

Query: 108 LRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKI 167
           LR+RFYD DSHCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I
Sbjct: 102 LRLRFYDLDSHCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDI 161

Query: 168 VEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRD 227
           +++V+++Y + G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ 
Sbjct: 162 IKRVREEYNVKGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKI 221

Query: 228 LLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           L+E FL+ENGI YSYS+++KFA+FRS KLP
Sbjct: 222 LIERFLEENGIMYSYSNVNKFAVFRSRKLP 250

[Close]

BLAST of Lsi07G004250.1 vs. TrEMBL
Match: A0A059AJC4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 136/210 (64.76%), Postives = 168/210 (80.00%), Query Frame = 1


Query: 48  FSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAV 107
           F NP     PMEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A 
Sbjct: 45  FPNPKSSSAPMEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAA 104

Query: 108 LRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKI 167
           LR+RFYD DSHCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I
Sbjct: 105 LRLRFYDLDSHCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDI 164

Query: 168 VEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRD 227
           +++V+++Y + G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ 
Sbjct: 165 IKRVREEYNVKGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKI 224

Query: 228 LLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           L+E FL+ENGI YSYS+++KFA+FRS KLP
Sbjct: 225 LIERFLEENGIMYSYSNVNKFAVFRSRKLP 253

[Close]

BLAST of Lsi07G004250.1 vs. TrEMBL
Match: A0A059AJJ8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-71
Identity = 132/200 (66.00%), Postives = 164/200 (82.00%), Query Frame = 1


Query: 58  MEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDS 117
           MEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A LR+RFYD DS
Sbjct: 1   MEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAALRLRFYDLDS 60

Query: 118 HCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEI 177
           HCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I+++V+++Y +
Sbjct: 61  HCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDIIKRVREEYNV 120

Query: 178 DGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENG 237
            G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ L+E FL+ENG
Sbjct: 121 KGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKILIERFLEENG 180

Query: 238 IPYSYSHISKFAIFRSGKLP 258
           I YSYS+++KFA+FRS KLP
Sbjct: 181 IMYSYSNVNKFAVFRSRKLP 199

[Close]

BLAST of Lsi07G004250.1 vs. TrEMBL
Match: K4C804_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.1e-71
Identity = 136/202 (67.33%), Postives = 168/202 (83.17%), Query Frame = 1


Query: 58  MEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDS 117
           MEVE+KLRLPD+ +H ++S +LS +H+KTH Q NIFFDG N+ELSS  AVLR+RFYD D+
Sbjct: 1   MEVEVKLRLPDAVTHQRVSSILSPYHLKTHAQENIFFDGANSELSSKLAVLRLRFYDLDT 60

Query: 118 HCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEI 177
            C++SLKAKP IS+GISRIEE+EEP+ PSIGRACV EP R L +++ S+I+ +VK++Y I
Sbjct: 61  QCIISLKAKPVISNGISRIEEDEEPIDPSIGRACVSEPWR-LPLIDSSRIMRRVKEEYGI 120

Query: 178 --DGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKE 237
              G VCLGGFRNVR VYEW GLKLELDET +DFG NYE+ECES +PE+ +DLLE FLK 
Sbjct: 121 GEKGLVCLGGFRNVRAVYEWSGLKLELDETHYDFGMNYEIECESSDPEKAKDLLEEFLKI 180

Query: 238 NGIPYSYSHISKFAIFRSGKLP 258
           +GI YSYS++SKFAIFRS KLP
Sbjct: 181 HGIEYSYSNVSKFAIFRSRKLP 201

[Close]

BLAST of Lsi07G004250.1 vs. TAIR10
Match: AT2G11890.1 (AT2G11890.1 adenylate cyclases)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-54
Identity = 106/212 (50.00%), Postives = 154/212 (72.64%), Query Frame = 1


Query: 58  MEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDS 117
           MEVE+KLRL  +++H +L+ LL+ +H+KT +Q N FFD P  +LS  +AVLR+RF  + +
Sbjct: 1   MEVEVKLRLLTAAAHLRLTTLLTPYHLKTLHQRNTFFDTPKNDLSLRRAVLRLRFLQNAA 60

Query: 118 ---------HCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIV 177
                     C++SLKAKPT+++GISR+EE+EE +   IG+ CVE P ++  +   S+++
Sbjct: 61  VSAASPSPPRCIVSLKAKPTLANGISRVEEDEEEIEYWIGKECVESPAKLSDI--GSRVL 120

Query: 178 EKVKDKYEID---GFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEED 237
           ++VK++Y  +   GFVCLGGF NVR VYEW+G+KLE+DET +DFG  YE+ECE+EEPE  
Sbjct: 121 KRVKEEYGFNDFLGFVCLGGFENVRNVYEWRGVKLEVDETKYDFGNCYEIECETEEPERV 180

Query: 238 RDLLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           + ++E FL E  I +S S ++KFA+FRSGKLP
Sbjct: 181 KTMIEEFLTEEKIEFSNSDMTKFAVFRSGKLP 210

[Close]

BLAST of Lsi07G004250.1 vs. NCBI nr
Match: gi|778689638|ref|XP_004152182.2| (PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 4.1e-104
Identity = 200/261 (76.63%), Postives = 217/261 (83.14%), Query Frame = 1


Query: 1   MSLRLIPNSGH-SFHLRRNRSPFLLFTNNLHRRPIFHIPSLSLRPTKRFSNPNEPPPPME 60
           MSLRL+PN GH S HLRRN               +FH    +LRPT +      PPPPME
Sbjct: 25  MSLRLLPNPGHPSLHLRRNCR-------------LFH----NLRPTNQ-----PPPPPME 84

Query: 61  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDSHC 120
           VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHN FFDGPNAELSSNQA LRIRFY++DSHC
Sbjct: 85  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNFFFDGPNAELSSNQAALRIRFYNEDSHC 144

Query: 121 VLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEIDG 180
           VLSLKAKPTISDGISRIEEEEE + PSIGRACVEEPNRM+LM E SKI+E+VK++Y IDG
Sbjct: 145 VLSLKAKPTISDGISRIEEEEEALEPSIGRACVEEPNRMMLMEE-SKILERVKEEYRIDG 204

Query: 181 FVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENGIP 240
           FVCLGGF+NVRRVY+WKGLKLELDETIF+FGRNYE+ECESE+ E DRDLLEGF KENGI 
Sbjct: 205 FVCLGGFKNVRRVYDWKGLKLELDETIFEFGRNYEMECESEDAERDRDLLEGFFKENGIS 262

Query: 241 YSYSHISKFAIFRSGKLPPCF 261
           YSYS  SK AIFRSGKLPP F
Sbjct: 265 YSYSQSSKLAIFRSGKLPPFF 262

[Close]

BLAST of Lsi07G004250.1 vs. NCBI nr
Match: gi|659108413|ref|XP_008454186.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis melo])

HSP 1 Score: 382.9 bits (982), Expect = 4.5e-103
Identity = 198/259 (76.45%), Postives = 213/259 (82.24%), Query Frame = 1


Query: 1   MSLRLIPNSGH-SFHLRRNRSPFLLFTNNLHRRPIFHIPSLSLRPTKRFSNPNEPPPPME 60
           MSLRL+PNSGH S HLRRN   F                   LRPT +     +PPPPME
Sbjct: 25  MSLRLLPNSGHPSLHLRRNCRLFY-----------------DLRPTNQ-----QPPPPME 84

Query: 61  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDSHC 120
           VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHN FFDGPNAELSSN A LRIR YD+DSHC
Sbjct: 85  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNFFFDGPNAELSSNHAALRIRLYDEDSHC 144

Query: 121 VLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEIDG 180
           VLSLKAKP ISDGISRIEEEEE + PSIGRACVEEPNRMLLM E SKI+E+VK++Y +DG
Sbjct: 145 VLSLKAKPIISDGISRIEEEEEALEPSIGRACVEEPNRMLLMEE-SKILERVKEEYGVDG 204

Query: 181 FVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENGIP 240
           FVCLGGF+N RRVYEWKGLKLELDETIF+FGRNYE+ECESE+ E DRDLLEGF+KENGI 
Sbjct: 205 FVCLGGFKNERRVYEWKGLKLELDETIFEFGRNYEMECESEDAERDRDLLEGFMKENGIR 260

Query: 241 YSYSHISKFAIFRSGKLPP 259
           YSYS  SKFAIFRSGKLPP
Sbjct: 265 YSYSQSSKFAIFRSGKLPP 260

[Close]

BLAST of Lsi07G004250.1 vs. NCBI nr
Match: gi|702484456|ref|XP_010033983.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 283.9 bits (725), Expect = 2.9e-73
Identity = 136/210 (64.76%), Postives = 168/210 (80.00%), Query Frame = 1


Query: 48  FSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAV 107
           F NP     PMEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A 
Sbjct: 42  FPNPKSSSAPMEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAA 101

Query: 108 LRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKI 167
           LR+RFYD DSHCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I
Sbjct: 102 LRLRFYDLDSHCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDI 161

Query: 168 VEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRD 227
           +++V+++Y + G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ 
Sbjct: 162 IKRVREEYNVKGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKI 221

Query: 228 LLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           L+E FL+ENGI YSYS+++KFA+FRS KLP
Sbjct: 222 LIERFLEENGIMYSYSNVNKFAVFRSRKLP 250

[Close]

BLAST of Lsi07G004250.1 vs. NCBI nr
Match: gi|702484451|ref|XP_010033982.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 283.9 bits (725), Expect = 2.9e-73
Identity = 136/210 (64.76%), Postives = 168/210 (80.00%), Query Frame = 1


Query: 48  FSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAV 107
           F NP     PMEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A 
Sbjct: 45  FPNPKSSSAPMEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAA 104

Query: 108 LRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKI 167
           LR+RFYD DSHCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I
Sbjct: 105 LRLRFYDLDSHCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDI 164

Query: 168 VEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRD 227
           +++V+++Y + G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ 
Sbjct: 165 IKRVREEYNVKGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKI 224

Query: 228 LLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           L+E FL+ENGI YSYS+++KFA+FRS KLP
Sbjct: 225 LIERFLEENGIMYSYSNVNKFAVFRSRKLP 253

[Close]

BLAST of Lsi07G004250.1 vs. NCBI nr
Match: gi|698588183|ref|XP_009779387.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like [Nicotiana sylvestris])

HSP 1 Score: 278.9 bits (712), Expect = 9.2e-72
Identity = 140/225 (62.22%), Postives = 178/225 (79.11%), Query Frame = 1


Query: 38  PSLSLRPTKRFSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGP 97
           PSL   P    S   +P   MEVE+KLRLP++ SH ++S +LS +H+KTH Q NIFFDG 
Sbjct: 14  PSLCRSPHSAIS---KPITSMEVEVKLRLPNAVSHQRVSSILSPYHLKTHAQENIFFDGA 73

Query: 98  NAELSSNQAVLRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNR 157
           N+ELSS  AVLR+RFYD D+ C++SLKAKP IS+G+SRIEE+EEP+ PSIGRACV +P R
Sbjct: 74  NSELSSKLAVLRLRFYDLDAQCIVSLKAKPVISNGVSRIEEDEEPIDPSIGRACVSDPWR 133

Query: 158 MLLMMEWSKIVEKVKDKYEI--DGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYEL 217
            LL+++ S+++++V+D+Y I   G VCLGGFRNVR VYEWKGLKLELDET ++FG NYE+
Sbjct: 134 -LLLIDSSRVIQRVRDEYGIGEKGLVCLGGFRNVRAVYEWKGLKLELDETHYEFGMNYEI 193

Query: 218 ECESEEPEEDRDLLEGFLKENGIPYSYSHISKFAIFRSGKLPPCF 261
           ECES +PE+ +DL+E  LK +GI YSYS +SKFAIFRSGKLP  F
Sbjct: 194 ECESSDPEKAKDLIEELLKSHGIEYSYSTVSKFAIFRSGKLPQRF 234

The following BLAST results are available for this feature:

BLAST of Lsi07G004250.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TTM3_ARATH	2.5e-53	50.00	Triphosphate tunel metalloenzyme 3 OS=Arabidopsis thaliana GN=TTM3 PE=1 SV=1	[more]

BLAST of Lsi07G004250.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTP9_CUCSA	2.9e-104	76.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006350 PE=4 SV=1	[more]
A0A059AKC1_EUCGR	2.0e-73	64.76	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1	[more]
A0A059AJC4_EUCGR	2.0e-73	64.76	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1	[more]
A0A059AJJ8_EUCGR	1.9e-71	66.00	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1	[more]
K4C804_SOLLC	7.1e-71	67.33	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of Lsi07G004250.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G11890.1	1.4e-54	50.00	adenylate cyclases	[more]

BLAST of Lsi07G004250.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689638\|ref\|XP_004152182.2\|	4.1e-104	76.63	PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis sativus]	[more]
gi\|659108413\|ref\|XP_008454186.1\|	4.5e-103	76.45	PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis melo]	[more]
gi\|702484456\|ref\|XP_010033983.1\|	2.9e-73	64.76	PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X2 [Eucalyptus grandi...	[more]
gi\|702484451\|ref\|XP_010033982.1\|	2.9e-73	64.76	PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X1 [Eucalyptus grandi...	[more]
gi\|698588183\|ref\|XP_009779387.1\|	9.2e-72	62.22	PREDICTED: triphosphate tunel metalloenzyme 3-like [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0050355	triphosphatase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0048364	root development

Vocabulary: **INTERPRO**
Term	Definition
IPR023577	CYTH_domain

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048364	root development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050355	triphosphatase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi07G004250	Lsi07G004250	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G004250.1.CDS.1	Lsi07G004250.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi07G004250.1	Lsi07G004250.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023577	CYTH domain	GENE3D	G3DSA:2.40.320.10		coord: 58..240 score: 1.6
IPR023577	CYTH domain	PFAM	PF01928	CYTH	coord: 58..238 score: 1.3
IPR023577	CYTH domain	SMART	SM01118	CYTH_2	coord: 57..255 score: 3.
IPR023577	CYTH domain	PROFILE	PS51707	CYTH	coord: 57..255 score: 16
None	No IPR available	PANTHER	PTHR34948	FAMILY NOT NAMED	coord: 58..258 score: 2.3E