Lsi07G004250 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G004250
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionAdenylate cyclase
Locationchr07 : 4500641 .. 4501423 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTCCGGTTGATTCCAAATTCCGGCCACTCCTTCCATCTCCGCCGCAATCGCAGCCCATTCCTCCTCTTCACCAACAATCTCCATCGCCGACCAATTTTCCACATCCCCTCTCTTTCACTCCGCCCCACAAAACGCTTCTCCAACCCAAATGAACCACCACCGCCAATGGAGGTCGAAATCAAGCTCCGCCTCCCCGACTCTTCCTCTCACCACAAACTCTCCCACCTCCTCTCCTCTCACCACATCAAAACTCACAATCAACACAACATCTTCTTCGACGGCCCCAACGCCGAGCTCTCCTCCAACCAAGCCGTCCTCCGGATCCGATTCTACGACGATGACAGCCATTGCGTTCTCTCTCTCAAAGCTAAACCTACAATCTCAGATGGAATCAGCCGCATCGAGGAGGAGGAAGAGCCGGTGGTGCCGTCGATCGGCCGCGCCTGCGTTGAGGAGCCGAATCGGATGCTGTTGATGATGGAATGGTCGAAGATTGTGGAGAAAGTGAAAGATAAGTATGAGATTGATGGGTTCGTGTGCTTGGGGGGATTCAGGAATGTGAGAAGAGTATATGAATGGAAGGGATTGAAATTGGAATTGGATGAAACGATTTTCGATTTCGGAAGGAATTATGAGTTGGAATGCGAGAGTGAAGAACCGGAAGAAGATAGGGATTTGTTGGAAGGGTTTTTGAAGGAGAATGGAATTCCTTATTCATATTCCCATATTTCCAAATTCGCCATTTTCCGATCTGGGAAGTTGCCGCCATGCTTCTGA

mRNA sequence

ATGAGTCTCCGGTTGATTCCAAATTCCGGCCACTCCTTCCATCTCCGCCGCAATCGCAGCCCATTCCTCCTCTTCACCAACAATCTCCATCGCCGACCAATTTTCCACATCCCCTCTCTTTCACTCCGCCCCACAAAACGCTTCTCCAACCCAAATGAACCACCACCGCCAATGGAGGTCGAAATCAAGCTCCGCCTCCCCGACTCTTCCTCTCACCACAAACTCTCCCACCTCCTCTCCTCTCACCACATCAAAACTCACAATCAACACAACATCTTCTTCGACGGCCCCAACGCCGAGCTCTCCTCCAACCAAGCCGTCCTCCGGATCCGATTCTACGACGATGACAGCCATTGCGTTCTCTCTCTCAAAGCTAAACCTACAATCTCAGATGGAATCAGCCGCATCGAGGAGGAGGAAGAGCCGGTGGTGCCGTCGATCGGCCGCGCCTGCGTTGAGGAGCCGAATCGGATGCTGTTGATGATGGAATGGTCGAAGATTGTGGAGAAAGTGAAAGATAAGTATGAGATTGATGGGTTCGTGTGCTTGGGGGGATTCAGGAATGTGAGAAGAGTATATGAATGGAAGGGATTGAAATTGGAATTGGATGAAACGATTTTCGATTTCGGAAGGAATTATGAGTTGGAATGCGAGAGTGAAGAACCGGAAGAAGATAGGGATTTGTTGGAAGGGTTTTTGAAGGAGAATGGAATTCCTTATTCATATTCCCATATTTCCAAATTCGCCATTTTCCGATCTGGGAAGTTGCCGCCATGCTTCTGA

Coding sequence (CDS)

ATGAGTCTCCGGTTGATTCCAAATTCCGGCCACTCCTTCCATCTCCGCCGCAATCGCAGCCCATTCCTCCTCTTCACCAACAATCTCCATCGCCGACCAATTTTCCACATCCCCTCTCTTTCACTCCGCCCCACAAAACGCTTCTCCAACCCAAATGAACCACCACCGCCAATGGAGGTCGAAATCAAGCTCCGCCTCCCCGACTCTTCCTCTCACCACAAACTCTCCCACCTCCTCTCCTCTCACCACATCAAAACTCACAATCAACACAACATCTTCTTCGACGGCCCCAACGCCGAGCTCTCCTCCAACCAAGCCGTCCTCCGGATCCGATTCTACGACGATGACAGCCATTGCGTTCTCTCTCTCAAAGCTAAACCTACAATCTCAGATGGAATCAGCCGCATCGAGGAGGAGGAAGAGCCGGTGGTGCCGTCGATCGGCCGCGCCTGCGTTGAGGAGCCGAATCGGATGCTGTTGATGATGGAATGGTCGAAGATTGTGGAGAAAGTGAAAGATAAGTATGAGATTGATGGGTTCGTGTGCTTGGGGGGATTCAGGAATGTGAGAAGAGTATATGAATGGAAGGGATTGAAATTGGAATTGGATGAAACGATTTTCGATTTCGGAAGGAATTATGAGTTGGAATGCGAGAGTGAAGAACCGGAAGAAGATAGGGATTTGTTGGAAGGGTTTTTGAAGGAGAATGGAATTCCTTATTCATATTCCCATATTTCCAAATTCGCCATTTTCCGATCTGGGAAGTTGCCGCCATGCTTCTGA

Protein sequence

MSLRLIPNSGHSFHLRRNRSPFLLFTNNLHRRPIFHIPSLSLRPTKRFSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENGIPYSYSHISKFAIFRSGKLPPCF
Homology
[Close]
BLAST of Lsi07G004250 vs. Swiss-Prot
Match: TTM3_ARATH (Triphosphate tunel metalloenzyme 3 OS=Arabidopsis thaliana GN=TTM3 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-53
Identity = 106/212 (50.00%), Postives = 154/212 (72.64%), Query Frame = 1 

Query: 58  MEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDS 117
           MEVE+KLRL  +++H +L+ LL+ +H+KT +Q N FFD P  +LS  +AVLR+RF  + +
Sbjct: 1   MEVEVKLRLLTAAAHLRLTTLLTPYHLKTLHQRNTFFDTPKNDLSLRRAVLRLRFLQNAA 60

Query: 118 ---------HCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIV 177
                     C++SLKAKPT+++GISR+EE+EE +   IG+ CVE P ++  +   S+++
Sbjct: 61  VSAASPSPPRCIVSLKAKPTLANGISRVEEDEEEIEYWIGKECVESPAKLSDI--GSRVL 120

Query: 178 EKVKDKYEID---GFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEED 237
           ++VK++Y  +   GFVCLGGF NVR VYEW+G+KLE+DET +DFG  YE+ECE+EEPE  
Sbjct: 121 KRVKEEYGFNDFLGFVCLGGFENVRNVYEWRGVKLEVDETKYDFGNCYEIECETEEPERV 180

Query: 238 RDLLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           + ++E FL E  I +S S ++KFA+FRSGKLP
Sbjct: 181 KTMIEEFLTEEKIEFSNSDMTKFAVFRSGKLP 210

[Close]
BLAST of Lsi07G004250 vs. TrEMBL
Match: A0A0A0KTP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006350 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 2.9e-104
Identity = 200/261 (76.63%), Postives = 217/261 (83.14%), Query Frame = 1 

Query: 1   MSLRLIPNSGH-SFHLRRNRSPFLLFTNNLHRRPIFHIPSLSLRPTKRFSNPNEPPPPME 60
           MSLRL+PN GH S HLRRN               +FH    +LRPT +      PPPPME
Sbjct: 25  MSLRLLPNPGHPSLHLRRNCR-------------LFH----NLRPTNQ-----PPPPPME 84

Query: 61  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDSHC 120
           VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHN FFDGPNAELSSNQA LRIRFY++DSHC
Sbjct: 85  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNFFFDGPNAELSSNQAALRIRFYNEDSHC 144

Query: 121 VLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEIDG 180
           VLSLKAKPTISDGISRIEEEEE + PSIGRACVEEPNRM+LM E SKI+E+VK++Y IDG
Sbjct: 145 VLSLKAKPTISDGISRIEEEEEALEPSIGRACVEEPNRMMLMEE-SKILERVKEEYRIDG 204

Query: 181 FVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENGIP 240
           FVCLGGF+NVRRVY+WKGLKLELDETIF+FGRNYE+ECESE+ E DRDLLEGF KENGI 
Sbjct: 205 FVCLGGFKNVRRVYDWKGLKLELDETIFEFGRNYEMECESEDAERDRDLLEGFFKENGIS 262

Query: 241 YSYSHISKFAIFRSGKLPPCF 261
           YSYS  SK AIFRSGKLPP F
Sbjct: 265 YSYSQSSKLAIFRSGKLPPFF 262

[Close]
BLAST of Lsi07G004250 vs. TrEMBL
Match: A0A059AKC1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 136/210 (64.76%), Postives = 168/210 (80.00%), Query Frame = 1 

Query: 48  FSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAV 107
           F NP     PMEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A 
Sbjct: 42  FPNPKSSSAPMEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAA 101

Query: 108 LRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKI 167
           LR+RFYD DSHCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I
Sbjct: 102 LRLRFYDLDSHCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDI 161

Query: 168 VEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRD 227
           +++V+++Y + G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ 
Sbjct: 162 IKRVREEYNVKGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKI 221

Query: 228 LLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           L+E FL+ENGI YSYS+++KFA+FRS KLP
Sbjct: 222 LIERFLEENGIMYSYSNVNKFAVFRSRKLP 250

[Close]
BLAST of Lsi07G004250 vs. TrEMBL
Match: A0A059AJC4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 136/210 (64.76%), Postives = 168/210 (80.00%), Query Frame = 1 

Query: 48  FSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAV 107
           F NP     PMEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A 
Sbjct: 45  FPNPKSSSAPMEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAA 104

Query: 108 LRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKI 167
           LR+RFYD DSHCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I
Sbjct: 105 LRLRFYDLDSHCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDI 164

Query: 168 VEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRD 227
           +++V+++Y + G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ 
Sbjct: 165 IKRVREEYNVKGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKI 224

Query: 228 LLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           L+E FL+ENGI YSYS+++KFA+FRS KLP
Sbjct: 225 LIERFLEENGIMYSYSNVNKFAVFRSRKLP 253

[Close]
BLAST of Lsi07G004250 vs. TrEMBL
Match: A0A059AJJ8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-71
Identity = 132/200 (66.00%), Postives = 164/200 (82.00%), Query Frame = 1 

Query: 58  MEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDS 117
           MEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A LR+RFYD DS
Sbjct: 1   MEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAALRLRFYDLDS 60

Query: 118 HCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEI 177
           HCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I+++V+++Y +
Sbjct: 61  HCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDIIKRVREEYNV 120

Query: 178 DGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENG 237
            G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ L+E FL+ENG
Sbjct: 121 KGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKILIERFLEENG 180

Query: 238 IPYSYSHISKFAIFRSGKLP 258
           I YSYS+++KFA+FRS KLP
Sbjct: 181 IMYSYSNVNKFAVFRSRKLP 199

[Close]
BLAST of Lsi07G004250 vs. TrEMBL
Match: K4C804_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.1e-71
Identity = 136/202 (67.33%), Postives = 168/202 (83.17%), Query Frame = 1 

Query: 58  MEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDS 117
           MEVE+KLRLPD+ +H ++S +LS +H+KTH Q NIFFDG N+ELSS  AVLR+RFYD D+
Sbjct: 1   MEVEVKLRLPDAVTHQRVSSILSPYHLKTHAQENIFFDGANSELSSKLAVLRLRFYDLDT 60

Query: 118 HCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEI 177
            C++SLKAKP IS+GISRIEE+EEP+ PSIGRACV EP R L +++ S+I+ +VK++Y I
Sbjct: 61  QCIISLKAKPVISNGISRIEEDEEPIDPSIGRACVSEPWR-LPLIDSSRIMRRVKEEYGI 120

Query: 178 --DGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKE 237
              G VCLGGFRNVR VYEW GLKLELDET +DFG NYE+ECES +PE+ +DLLE FLK 
Sbjct: 121 GEKGLVCLGGFRNVRAVYEWSGLKLELDETHYDFGMNYEIECESSDPEKAKDLLEEFLKI 180

Query: 238 NGIPYSYSHISKFAIFRSGKLP 258
           +GI YSYS++SKFAIFRS KLP
Sbjct: 181 HGIEYSYSNVSKFAIFRSRKLP 201

[Close]
BLAST of Lsi07G004250 vs. TAIR10
Match: AT2G11890.1 (AT2G11890.1 adenylate cyclases)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-54
Identity = 106/212 (50.00%), Postives = 154/212 (72.64%), Query Frame = 1 

Query: 58  MEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDS 117
           MEVE+KLRL  +++H +L+ LL+ +H+KT +Q N FFD P  +LS  +AVLR+RF  + +
Sbjct: 1   MEVEVKLRLLTAAAHLRLTTLLTPYHLKTLHQRNTFFDTPKNDLSLRRAVLRLRFLQNAA 60

Query: 118 ---------HCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIV 177
                     C++SLKAKPT+++GISR+EE+EE +   IG+ CVE P ++  +   S+++
Sbjct: 61  VSAASPSPPRCIVSLKAKPTLANGISRVEEDEEEIEYWIGKECVESPAKLSDI--GSRVL 120

Query: 178 EKVKDKYEID---GFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEED 237
           ++VK++Y  +   GFVCLGGF NVR VYEW+G+KLE+DET +DFG  YE+ECE+EEPE  
Sbjct: 121 KRVKEEYGFNDFLGFVCLGGFENVRNVYEWRGVKLEVDETKYDFGNCYEIECETEEPERV 180

Query: 238 RDLLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           + ++E FL E  I +S S ++KFA+FRSGKLP
Sbjct: 181 KTMIEEFLTEEKIEFSNSDMTKFAVFRSGKLP 210

[Close]
BLAST of Lsi07G004250 vs. NCBI nr
Match: gi|778689638|ref|XP_004152182.2| (PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 4.1e-104
Identity = 200/261 (76.63%), Postives = 217/261 (83.14%), Query Frame = 1 

Query: 1   MSLRLIPNSGH-SFHLRRNRSPFLLFTNNLHRRPIFHIPSLSLRPTKRFSNPNEPPPPME 60
           MSLRL+PN GH S HLRRN               +FH    +LRPT +      PPPPME
Sbjct: 25  MSLRLLPNPGHPSLHLRRNCR-------------LFH----NLRPTNQ-----PPPPPME 84

Query: 61  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDSHC 120
           VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHN FFDGPNAELSSNQA LRIRFY++DSHC
Sbjct: 85  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNFFFDGPNAELSSNQAALRIRFYNEDSHC 144

Query: 121 VLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEIDG 180
           VLSLKAKPTISDGISRIEEEEE + PSIGRACVEEPNRM+LM E SKI+E+VK++Y IDG
Sbjct: 145 VLSLKAKPTISDGISRIEEEEEALEPSIGRACVEEPNRMMLMEE-SKILERVKEEYRIDG 204

Query: 181 FVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENGIP 240
           FVCLGGF+NVRRVY+WKGLKLELDETIF+FGRNYE+ECESE+ E DRDLLEGF KENGI 
Sbjct: 205 FVCLGGFKNVRRVYDWKGLKLELDETIFEFGRNYEMECESEDAERDRDLLEGFFKENGIS 262

Query: 241 YSYSHISKFAIFRSGKLPPCF 261
           YSYS  SK AIFRSGKLPP F
Sbjct: 265 YSYSQSSKLAIFRSGKLPPFF 262

[Close]
BLAST of Lsi07G004250 vs. NCBI nr
Match: gi|659108413|ref|XP_008454186.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis melo])

HSP 1 Score: 382.9 bits (982), Expect = 4.5e-103
Identity = 198/259 (76.45%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 1   MSLRLIPNSGH-SFHLRRNRSPFLLFTNNLHRRPIFHIPSLSLRPTKRFSNPNEPPPPME 60
           MSLRL+PNSGH S HLRRN   F                   LRPT +     +PPPPME
Sbjct: 25  MSLRLLPNSGHPSLHLRRNCRLFY-----------------DLRPTNQ-----QPPPPME 84

Query: 61  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAVLRIRFYDDDSHC 120
           VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHN FFDGPNAELSSN A LRIR YD+DSHC
Sbjct: 85  VEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNFFFDGPNAELSSNHAALRIRLYDEDSHC 144

Query: 121 VLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKIVEKVKDKYEIDG 180
           VLSLKAKP ISDGISRIEEEEE + PSIGRACVEEPNRMLLM E SKI+E+VK++Y +DG
Sbjct: 145 VLSLKAKPIISDGISRIEEEEEALEPSIGRACVEEPNRMLLMEE-SKILERVKEEYGVDG 204

Query: 181 FVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRDLLEGFLKENGIP 240
           FVCLGGF+N RRVYEWKGLKLELDETIF+FGRNYE+ECESE+ E DRDLLEGF+KENGI 
Sbjct: 205 FVCLGGFKNERRVYEWKGLKLELDETIFEFGRNYEMECESEDAERDRDLLEGFMKENGIR 260

Query: 241 YSYSHISKFAIFRSGKLPP 259
           YSYS  SKFAIFRSGKLPP
Sbjct: 265 YSYSQSSKFAIFRSGKLPP 260

[Close]
BLAST of Lsi07G004250 vs. NCBI nr
Match: gi|702484456|ref|XP_010033983.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 283.9 bits (725), Expect = 2.9e-73
Identity = 136/210 (64.76%), Postives = 168/210 (80.00%), Query Frame = 1 

Query: 48  FSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAV 107
           F NP     PMEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A 
Sbjct: 42  FPNPKSSSAPMEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAA 101

Query: 108 LRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKI 167
           LR+RFYD DSHCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I
Sbjct: 102 LRLRFYDLDSHCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDI 161

Query: 168 VEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRD 227
           +++V+++Y + G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ 
Sbjct: 162 IKRVREEYNVKGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKI 221

Query: 228 LLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           L+E FL+ENGI YSYS+++KFA+FRS KLP
Sbjct: 222 LIERFLEENGIMYSYSNVNKFAVFRSRKLP 250

[Close]
BLAST of Lsi07G004250 vs. NCBI nr
Match: gi|702484451|ref|XP_010033982.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 283.9 bits (725), Expect = 2.9e-73
Identity = 136/210 (64.76%), Postives = 168/210 (80.00%), Query Frame = 1 

Query: 48  FSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGPNAELSSNQAV 107
           F NP     PMEVEIKLRLPDS++H +LS  LS  H+KT  Q N+FFDG  +EL  N A 
Sbjct: 45  FPNPKSSSAPMEVEIKLRLPDSTAHQQLSDALSPFHVKTLAQENVFFDGEGSELVKNLAA 104

Query: 108 LRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNRMLLMMEWSKI 167
           LR+RFYD DSHCVLSLKAKP IS GISR+EE+EE V PS+GRACV++P R+LL    S I
Sbjct: 105 LRLRFYDLDSHCVLSLKAKPVISSGISRVEEQEESVDPSVGRACVDDPGRLLLFGS-SDI 164

Query: 168 VEKVKDKYEIDGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYELECESEEPEEDRD 227
           +++V+++Y + G VCLGGFRNVR VY+WKGLKLELDET++DFG +YE+ECES EPE D+ 
Sbjct: 165 IKRVREEYNVKGLVCLGGFRNVRAVYDWKGLKLELDETVYDFGTSYEIECESAEPERDKI 224

Query: 228 LLEGFLKENGIPYSYSHISKFAIFRSGKLP 258
           L+E FL+ENGI YSYS+++KFA+FRS KLP
Sbjct: 225 LIERFLEENGIMYSYSNVNKFAVFRSRKLP 253

[Close]
BLAST of Lsi07G004250 vs. NCBI nr
Match: gi|698588183|ref|XP_009779387.1| (PREDICTED: triphosphate tunel metalloenzyme 3-like [Nicotiana sylvestris])

HSP 1 Score: 278.9 bits (712), Expect = 9.2e-72
Identity = 140/225 (62.22%), Postives = 178/225 (79.11%), Query Frame = 1 

Query: 38  PSLSLRPTKRFSNPNEPPPPMEVEIKLRLPDSSSHHKLSHLLSSHHIKTHNQHNIFFDGP 97
           PSL   P    S   +P   MEVE+KLRLP++ SH ++S +LS +H+KTH Q NIFFDG 
Sbjct: 14  PSLCRSPHSAIS---KPITSMEVEVKLRLPNAVSHQRVSSILSPYHLKTHAQENIFFDGA 73

Query: 98  NAELSSNQAVLRIRFYDDDSHCVLSLKAKPTISDGISRIEEEEEPVVPSIGRACVEEPNR 157
           N+ELSS  AVLR+RFYD D+ C++SLKAKP IS+G+SRIEE+EEP+ PSIGRACV +P R
Sbjct: 74  NSELSSKLAVLRLRFYDLDAQCIVSLKAKPVISNGVSRIEEDEEPIDPSIGRACVSDPWR 133

Query: 158 MLLMMEWSKIVEKVKDKYEI--DGFVCLGGFRNVRRVYEWKGLKLELDETIFDFGRNYEL 217
            LL+++ S+++++V+D+Y I   G VCLGGFRNVR VYEWKGLKLELDET ++FG NYE+
Sbjct: 134 -LLLIDSSRVIQRVRDEYGIGEKGLVCLGGFRNVRAVYEWKGLKLELDETHYEFGMNYEI 193

Query: 218 ECESEEPEEDRDLLEGFLKENGIPYSYSHISKFAIFRSGKLPPCF 261
           ECES +PE+ +DL+E  LK +GI YSYS +SKFAIFRSGKLP  F
Sbjct: 194 ECESSDPEKAKDLIEELLKSHGIEYSYSTVSKFAIFRSGKLPQRF 234

The following BLAST results are available for this feature:
BLAST of Lsi07G004250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TTM3_ARATH2.5e-5350.00Triphosphate tunel metalloenzyme 3 OS=Arabidopsis thaliana GN=TTM3 PE=1 SV=1[more]
BLAST of Lsi07G004250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTP9_CUCSA2.9e-10476.63Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006350 PE=4 SV=1[more]
A0A059AKC1_EUCGR2.0e-7364.76Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1[more]
A0A059AJC4_EUCGR2.0e-7364.76Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1[more]
A0A059AJJ8_EUCGR1.9e-7166.00Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03086 PE=4 SV=1[more]
K4C804_SOLLC7.1e-7167.33Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Lsi07G004250 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G11890.11.4e-5450.00 adenylate cyclases[more]
BLAST of Lsi07G004250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778689638|ref|XP_004152182.2|4.1e-10476.63PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis sativus][more]
gi|659108413|ref|XP_008454186.1|4.5e-10376.45PREDICTED: triphosphate tunel metalloenzyme 3-like [Cucumis melo][more]
gi|702484456|ref|XP_010033983.1|2.9e-7364.76PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X2 [Eucalyptus grandi... [more]
gi|702484451|ref|XP_010033982.1|2.9e-7364.76PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X1 [Eucalyptus grandi... [more]
gi|698588183|ref|XP_009779387.1|9.2e-7262.22PREDICTED: triphosphate tunel metalloenzyme 3-like [Nicotiana sylvestris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050355triphosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0048364root development
Vocabulary: INTERPRO
TermDefinition
IPR023577CYTH_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048364 root development
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0050355 triphosphatase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0016462 pyrophosphatase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G004250.1Lsi07G004250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023577CYTH domainGENE3DG3DSA:2.40.320.10coord: 58..240
score: 1.6
IPR023577CYTH domainPFAMPF01928CYTHcoord: 58..238
score: 1.3
IPR023577CYTH domainSMARTSM01118CYTH_2coord: 57..255
score: 3.
IPR023577CYTH domainPROFILEPS51707CYTHcoord: 57..255
score: 16
NoneNo IPR availablePANTHERPTHR34948FAMILY NOT NAMEDcoord: 58..258
score: 2.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G004250Csa4G006350Cucumber (Chinese Long) v2culsiB312
Lsi07G004250Csa2G008660Cucumber (Chinese Long) v2culsiB138
Lsi07G004250CSPI02G02150Wild cucumber (PI 183967)cpilsiB137
Lsi07G004250CSPI04G01910Wild cucumber (PI 183967)cpilsiB311
Lsi07G004250Cucsa.096090Cucumber (Gy14) v1cgylsiB113
Lsi07G004250CmaCh14G013690Cucurbita maxima (Rimu)cmalsiB256
Lsi07G004250CmoCh12G012080Cucurbita moschata (Rifu)cmolsiB174
Lsi07G004250CmoCh14G014050Cucurbita moschata (Rifu)cmolsiB244
Lsi07G004250Cla012741Watermelon (97103) v1lsiwmB438
Lsi07G004250MELO3C017846Melon (DHL92) v3.5.1lsimeB447
Lsi07G004250ClCG11G003480Watermelon (Charleston Gray)lsiwcgB392
Lsi07G004250ClCG07G012270Watermelon (Charleston Gray)lsiwcgB406
Lsi07G004250MELO3C017846.2Melon (DHL92) v3.6.1lsimedB465
Lsi07G004250Cla97C07G139050Watermelon (97103) v2lsiwmbB405
Lsi07G004250Bhi01G002799Wax gourdlsiwgoB558
Lsi07G004250CsGy4G001830Cucumber (Gy14) v2cgyblsiB285
Lsi07G004250Carg06524Silver-seed gourdcarlsiB109
Lsi07G004250CsaV3_4G001880Cucumber (Chinese Long) v3cuclsiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G004250Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi07G004250Cucumber (Gy14) v1cgylsiB136
Lsi07G004250Cucurbita maxima (Rimu)cmalsiB449
Lsi07G004250Cucurbita maxima (Rimu)cmalsiB450
Lsi07G004250Cucurbita maxima (Rimu)cmalsiB736
Lsi07G004250Cucurbita moschata (Rifu)cmolsiB436
Lsi07G004250Cucurbita moschata (Rifu)cmolsiB437
Lsi07G004250Cucurbita moschata (Rifu)cmolsiB727
Lsi07G004250Cucurbita pepo (Zucchini)cpelsiB472
Lsi07G004250Cucurbita pepo (Zucchini)cpelsiB476
Lsi07G004250Cucurbita pepo (Zucchini)cpelsiB515
Lsi07G004250Cucurbita pepo (Zucchini)cpelsiB516
Lsi07G004250Wild cucumber (PI 183967)cpilsiB546
Lsi07G004250Melon (DHL92) v3.5.1lsimeB430
Lsi07G004250Watermelon (Charleston Gray)lsiwcgB387
Lsi07G004250Cucumber (Gy14) v2cgyblsiB502
Lsi07G004250Melon (DHL92) v3.6.1lsimedB451
Lsi07G004250Silver-seed gourdcarlsiB182
Lsi07G004250Silver-seed gourdcarlsiB183
Lsi07G004250Cucumber (Chinese Long) v3cuclsiB150
Lsi07G004250Cucumber (Chinese Long) v3cuclsiB568
Lsi07G004250Watermelon (97103) v2lsiwmbB420