Lsi06G007890.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGATTTTTAGAGATACTACTGCTACAGGGGTAAATGCTTACCCATCAACAAAACTTCCTTCAGATTCTGAAGATGAAAATAATGTTGGAAGCAATACGAACTTGCCTGGTGAAGAAAATGATAATGAAAAAAAGTAGAAAACGAGTTCGAAGGAAGAGGGACGAATTTGGTAGTTTCTTTTCTTCATTTATAGATGTGTATGCTGAGAACGCAAGAGAAAAATGACATCCTTGAGAAAAGATCTTTTAGTTCTACCGCCAGTCAAGTTAATGAGGGTCAATCATCAAGGAGAAAAGATGAAGTTGATGAAGAGCTTATGAAATGTTTCAAAATTTTAAATACAATGGAGGATATTGATGGAGAGGCTTATACTAAAGTACTGAAACTTTTGCATGGAGAACTTGCATGGAGAAAATTATTTTTACTCATGCCTGATTCAAAGAAGAAGGATTTCATAAACAGTATTTAG ATGAGGATTTTTAGAGATACTACTGCTACAGGGGTAAATGCTTACCCATCAACAAAACTTCCTTCAGATTCTGAAGATGAAAATAATATGTGTATGCTGAGAACGCAAGAGAAAAATGACATCCTTGAGAAAAGATCTTTTAGTTCTACCGCCAGTCAAGTTAATGAGGGTCAATCATCAAGGAGAAAAGATGAAGTTGATGAAGAGCTTATGAAATGTTTCAAAATTTTAAATACAATGGAGGATATTGATGGAGAGGCTTATACTAAAGTACTGAAACTTTTGCATGGAGAACTTGCATGGAGAAAATTATTTTTACTCATGCCTGATTCAAAGAAGAAGGATTTCATAAACAGTATTTAG ATGAGGATTTTTAGAGATACTACTGCTACAGGGGTAAATGCTTACCCATCAACAAAACTTCCTTCAGATTCTGAAGATGAAAATAATATGTGTATGCTGAGAACGCAAGAGAAAAATGACATCCTTGAGAAAAGATCTTTTAGTTCTACCGCCAGTCAAGTTAATGAGGGTCAATCATCAAGGAGAAAAGATGAAGTTGATGAAGAGCTTATGAAATGTTTCAAAATTTTAAATACAATGGAGGATATTGATGGAGAGGCTTATACTAAAGTACTGAAACTTTTGCATGGAGAACTTGCATGGAGAAAATTATTTTTACTCATGCCTGATTCAAAGAAGAAGGATTTCATAAACAGTATTTAG MRIFRDTTATGVNAYPSTKLPSDSEDENNMCMLRTQEKNDILEKRSFSSTASQVNEGQSSRRKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
BLAST of Lsi06G007890.1 vs. TrEMBL
Match: A0A0J8EYG3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g141830 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.8e-14 Identity = 52/138 (37.68%), Postives = 82/138 (59.42%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. TrEMBL
Match: A0A0A0LHR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G825110 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.1e-13 Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. TrEMBL
Match: A0A0K9RBM6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_091330 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.3e-11 Identity = 54/158 (34.18%), Postives = 77/158 (48.73%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. TrEMBL
Match: K7MAX1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G120200 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.4e-07 Identity = 49/164 (29.88%), Postives = 72/164 (43.90%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. TrEMBL
Match: A0A0B2PYN4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_012459 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.7e-07 Identity = 49/164 (29.88%), Postives = 72/164 (43.90%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. NCBI nr
Match: gi|659095125|ref|XP_008448411.1| (PREDICTED: uncharacterized protein LOC103490615 [Cucumis melo]) HSP 1 Score: 133.3 bits (334), Expect = 2.9e-28 Identity = 76/159 (47.80%), Postives = 98/159 (61.64%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. NCBI nr
Match: gi|659123601|ref|XP_008461742.1| (PREDICTED: uncharacterized protein LOC103500275 [Cucumis melo]) HSP 1 Score: 115.5 bits (288), Expect = 6.2e-23 Identity = 68/150 (45.33%), Postives = 87/150 (58.00%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. NCBI nr
Match: gi|694390942|ref|XP_009371023.1| (PREDICTED: TMV resistance protein N-like [Pyrus x bretschneideri]) HSP 1 Score: 90.1 bits (222), Expect = 2.8e-15 Identity = 52/100 (52.00%), Postives = 63/100 (63.00%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. NCBI nr
Match: gi|658035961|ref|XP_008353519.1| (PREDICTED: uncharacterized protein LOC103417092 [Malus domestica]) HSP 1 Score: 87.0 bits (214), Expect = 2.4e-14 Identity = 51/100 (51.00%), Postives = 62/100 (62.00%), Query Frame = 1
BLAST of Lsi06G007890.1 vs. NCBI nr
Match: gi|870856646|gb|KMT08256.1| (hypothetical protein BVRB_6g141830 isoform B [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 86.3 bits (212), Expect = 4.0e-14 Identity = 52/138 (37.68%), Postives = 82/138 (59.42%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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