Lsi05G013760.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTCTTCATCTTCTCTCTCTTGAATTATTTTTCTCTCTATATATTCTGACCCATTTCACTTCCAACGCCTTTCAGCCAAACATATTCTCAAACCTCAAACATTACTTTACTAATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTAGAAAGGCTTGCACCATCTTCAACCAAAACCCTCGAGATCCTAAAAAGTCTCATTCCGACTCAGGTTACCTCTCGTCCTTCCTTTTAAAGCACTTGAAAAGTTATTTCAAACCAACCAATGAATTTTCATCCTACAATTCAAGAAAATTTCTGACTCCATTTTTTTGTTTAATTGGATTTTTTCAGAGCAAGAGAAGCGAGTGGACGTGAGGAATCTCCAAGGAGAAGTGATGGCATGTGGGTATGAAGATGTGCACGTGATGTGGTCTATTTTAGACAAGGCCAATTCTACTGCTACCGCCACCGCTGCCACTTGTAATGTGTCTTCTTAACGATCGACACCACCGTCGGCCCCGTCGTGGTCGACGGATGTTGGTTGCTTAATTGTTGTAGATAAACCATAATACGTCTCTCTCTCCCTCACTTTCTCTATGTTATTTTGGAGTTAATGATTTTGTTTATGTGTAGGGAATGAATCCCCATGATTTGAAGCTTTTAATCATGGTGAGATTTAAGGTTTTTATTACTCTTAAATTTTAATTAATGC CTCTTCTTCATCTTCTCTCTCTTGAATTATTTTTCTCTCTATATATTCTGACCCATTTCACTTCCAACGCCTTTCAGCCAAACATATTCTCAAACCTCAAACATTACTTTACTAATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTAGAAAGGCTTGCACCATCTTCAACCAAAACCCTCGAGATCCTAAAAAGTCTCATTCCGACTCAGAGCAAGAGAAGCGAGTGGACGTGAGGAATCTCCAAGGAGAAGTGATGGCATGTGGGTATGAAGATGTGCACGTGATGTGGTCTATTTTAGACAAGGCCAATTCTACTGCTACCGCCACCGCTGCCACTTGTAATGTGTCTTCTTAACGATCGACACCACCGTCGGCCCCGTCGTGGTCGACGGATGTTGGTTGCTTAATTGTTGTAGATAAACCATAATACGTCTCTCTCTCCCTCACTTTCTCTATGTTATTTTGGAGTTAATGATTTTGTTTATGTGTAGGGAATGAATCCCCATGATTTGAAGCTTTTAATCATGGTGAGATTTAAGGTTTTTATTACTCTTAAATTTTAATTAATGC ATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTAGAAAGGCTTGCACCATCTTCAACCAAAACCCTCGAGATCCTAAAAAGTCTCATTCCGACTCAGAGCAAGAGAAGCGAGTGGACGTGAGGAATCTCCAAGGAGAAGTGATGGCATGTGGGTATGAAGATGTGCACGTGATGTGGTCTATTTTAGACAAGGCCAATTCTACTGCTACCGCCACCGCTGCCACTTGTAATGTGTCTTCTTAA MASWKKTIISPFRKACTIFNQNPRDPKKSHSDSEQEKRVDVRNLQGEVMACGYEDVHVMWSILDKANSTATATAATCNVSS
BLAST of Lsi05G013760.1 vs. TrEMBL
Match: A0A0A0L5H1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171230 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-33 Identity = 77/83 (92.77%), Postives = 77/83 (92.77%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. TrEMBL
Match: A0A059B5L7_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_H04140 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.2e-19 Identity = 50/68 (73.53%), Postives = 55/68 (80.88%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. TrEMBL
Match: A0A067K874_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19104 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 4.4e-19 Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. TrEMBL
Match: G7JR35_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g124250 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.8e-18 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. TrEMBL
Match: K7MC91_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G185200 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.8e-18 Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. TAIR10
Match: AT3G17580.1 (AT3G17580.1 unknown protein) HSP 1 Score: 89.0 bits (219), Expect = 1.5e-18 Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. TAIR10
Match: AT1G48330.1 (AT1G48330.1 unknown protein) HSP 1 Score: 84.3 bits (207), Expect = 3.7e-17 Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. NCBI nr
Match: gi|659077054|ref|XP_008439007.1| (PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo]) HSP 1 Score: 154.8 bits (390), Expect = 6.3e-35 Identity = 77/82 (93.90%), Postives = 77/82 (93.90%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. NCBI nr
Match: gi|449459806|ref|XP_004147637.1| (PREDICTED: uncharacterized protein LOC101206709 [Cucumis sativus]) HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33 Identity = 77/83 (92.77%), Postives = 77/83 (92.77%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. NCBI nr
Match: gi|629095418|gb|KCW61413.1| (hypothetical protein EUGRSUZ_H04140, partial [Eucalyptus grandis]) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19 Identity = 50/68 (73.53%), Postives = 55/68 (80.88%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. NCBI nr
Match: gi|702447391|ref|XP_010024889.1| (PREDICTED: uncharacterized protein LOC104415311 [Eucalyptus grandis]) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19 Identity = 50/68 (73.53%), Postives = 55/68 (80.88%), Query Frame = 1
BLAST of Lsi05G013760.1 vs. NCBI nr
Match: gi|802706977|ref|XP_012084229.1| (PREDICTED: uncharacterized protein LOC105643649 [Jatropha curcas]) HSP 1 Score: 101.7 bits (252), Expect = 6.3e-19 Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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