Lsi05G010980.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G010980.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Carbohydrate esterase plant-like protein
Location	chr05 : 18760021 .. 18760887 (+)
Sequence length	867

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGTTGGGACTATCGGTCATGTTATGTACGATGCTATTTAGCCCTTCCCTTTCAGGGGCTGCTTCTCCTAAGAACATATTCATCCTCGCCGGTCAAAGCAACATGGCCGGTCGAGGTGGGGTTGAGAAAGATCAATCGGGAGAACTCGTGTGGGATGGGTTGGTCCCACCAGAATGTCAACCTGAACCATCCATCCTACGATTTAACCCCACGCGCCAATGGGAGACAGCTCGAGAGCCTCTCCACGACGGAATTGACATCAACAAGACAGTTGGGATTGGACCAGGTATGCCATTTGCTCACCAACTGCTAGCCAAAGTCAGGCCAAATGCTGGCGTTGTGGGTTTAATCCCTTGTGCTAGAGGTGGCACTTTAATTGAACAATGGATTAAAAATCCTAGCAATCCTGATGCAACTTTTTACCAAAATTTTATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTGCGTGCTCTTTTTTGGTTTCAAGGGGAAAGTGATGCAGCTATGAGCGACACTGCTAAGAGATACAAGGACAACCTAAAAAATTTCTTCACCGACATCCGCAATGACATAAAGCCTAGATTTTTGCCAATCATTGTTGTTAAAATTGCCATCTATGACTTTTTTATGAAGCACGATACTCATGATTTGCCAGCAGTGAGGGCAGCAGAAGATGCAGTTAGCAAGGAGCTGTCGGATGTGGTGACCATTGATGCCTTGGAATTACCTATAAACTTTACAACAAATGCAGGCATTAACCAAGATCATGGTCATTTTAATACCACAACTGAGATTATTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGTCATTTACTTTAA

mRNA sequence

ATGGCTTTGTTGGGACTATCGGTCATGTTATGTACGATGCTATTTAGCCCTTCCCTTTCAGGGGCTGCTTCTCCTAAGAACATATTCATCCTCGCCGGTCAAAGCAACATGGCCGGTCGAGGTGGGGTTGAGAAAGATCAATCGGGAGAACTCGTGTGGGATGGGTTGGTCCCACCAGAATGTCAACCTGAACCATCCATCCTACGATTTAACCCCACGCGCCAATGGGAGACAGCTCGAGAGCCTCTCCACGACGGAATTGACATCAACAAGACAGTTGGGATTGGACCAGGTATGCCATTTGCTCACCAACTGCTAGCCAAAGTCAGGCCAAATGCTGGCGTTGTGGGTTTAATCCCTTGTGCTAGAGGTGGCACTTTAATTGAACAATGGATTAAAAATCCTAGCAATCCTGATGCAACTTTTTACCAAAATTTTATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTGCGTGCTCTTTTTTGGTTTCAAGGGGAAAGTGATGCAGCTATGAGCGACACTGCTAAGAGATACAAGGACAACCTAAAAAATTTCTTCACCGACATCCGCAATGACATAAAGCCTAGATTTTTGCCAATCATTGTTGTTAAAATTGCCATCTATGACTTTTTTATGAAGCACGATACTCATGATTTGCCAGCAGTGAGGGCAGCAGAAGATGCAGTTAGCAAGGAGCTGTCGGATGTGGTGACCATTGATGCCTTGGAATTACCTATAAACTTTACAACAAATGCAGGCATTAACCAAGATCATGGTCATTTTAATACCACAACTGAGATTATTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGTCATTTACTTTAA

Coding sequence (CDS)

ATGGCTTTGTTGGGACTATCGGTCATGTTATGTACGATGCTATTTAGCCCTTCCCTTTCAGGGGCTGCTTCTCCTAAGAACATATTCATCCTCGCCGGTCAAAGCAACATGGCCGGTCGAGGTGGGGTTGAGAAAGATCAATCGGGAGAACTCGTGTGGGATGGGTTGGTCCCACCAGAATGTCAACCTGAACCATCCATCCTACGATTTAACCCCACGCGCCAATGGGAGACAGCTCGAGAGCCTCTCCACGACGGAATTGACATCAACAAGACAGTTGGGATTGGACCAGGTATGCCATTTGCTCACCAACTGCTAGCCAAAGTCAGGCCAAATGCTGGCGTTGTGGGTTTAATCCCTTGTGCTAGAGGTGGCACTTTAATTGAACAATGGATTAAAAATCCTAGCAATCCTGATGCAACTTTTTACCAAAATTTTATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTGCGTGCTCTTTTTTGGTTTCAAGGGGAAAGTGATGCAGCTATGAGCGACACTGCTAAGAGATACAAGGACAACCTAAAAAATTTCTTCACCGACATCCGCAATGACATAAAGCCTAGATTTTTGCCAATCATTGTTGTTAAAATTGCCATCTATGACTTTTTTATGAAGCACGATACTCATGATTTGCCAGCAGTGAGGGCAGCAGAAGATGCAGTTAGCAAGGAGCTGTCGGATGTGGTGACCATTGATGCCTTGGAATTACCTATAAACTTTACAACAAATGCAGGCATTAACCAAGATCATGGTCATTTTAATACCACAACTGAGATTATTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGTCATTTACTTTAA

Protein sequence

MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPECQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL

Homology

[Close]

BLAST of Lsi05G010980.1 vs. Swiss-Prot
Match: CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-47
Identity = 103/269 (38.29%), Postives = 151/269 (56.13%), Query Frame = 1


Query: 17  PSLSGAASPKNIFILAGQSNMAGRGGVEKDQ-SGELVWDGLVPPECQPEPSILRFNPTRQ 76
           P +     P  IFIL+GQSNMAGRGGV KD  +   VWD ++PPEC P  SILR +   +
Sbjct: 13  PEIQSPIPPNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLR 72

Query: 77  WETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNP 136
           WE A EPLH  ID  K  G+GPGM FA+ +  ++  ++ V+GL+PCA GGT I++W +  
Sbjct: 73  WEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERG- 132

Query: 137 SNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRND 196
               +  Y+  ++R + S K GG ++A+ W+QGESD      A+ Y +N+     ++R+D
Sbjct: 133 ----SHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHD 192

Query: 197 IKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNA 256
           +    LPII V IA    ++          +  E  +  +LS+VV +DA  LP       
Sbjct: 193 LNLPSLPIIQVAIASGGGYID---------KVREAQLGLKLSNVVCVDAKGLP------- 252

Query: 257 GINQDHGHFNTTTEIILGKWLADTYLSHY 285
            +  D+ H  T  ++ LG  LA  YLS++
Sbjct: 253 -LKSDNLHLTTEAQVQLGLSLAQAYLSNF 259

[Close]

BLAST of Lsi05G010980.1 vs. TrEMBL
Match: A0A0A0LNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356040 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.7e-135
Identity = 234/288 (81.25%), Postives = 256/288 (88.89%), Query Frame = 1


Query: 1   MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPE 60
           M LL LS++LC ML+ PSLSGAASPKNIFILAGQSNMAGRGGVE +  G L WDGLVPPE
Sbjct: 1   MVLLRLSIILCVMLYGPSLSGAASPKNIFILAGQSNMAGRGGVENNAQGNLQWDGLVPPE 60

Query: 61  CQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIP 120
           CQP+PSILR NP  QWE AREPLH GIDI +T GIGPG+ FAH+LL K  PNAG VGL+P
Sbjct: 61  CQPQPSILRLNPGLQWEIAREPLHLGIDIKRTPGIGPGIAFAHELLVKAGPNAGAVGLVP 120

Query: 121 CARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKR 180
           CARGGTLIEQWIKNPSNP ATFYQNFIERIKASDK+GGVVRALFWFQGESDAAM+DTA R
Sbjct: 121 CARGGTLIEQWIKNPSNPSATFYQNFIERIKASDKDGGVVRALFWFQGESDAAMNDTAIR 180

Query: 181 YKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVV 240
           YKDNLK FFTDIR+DIKPRFLPIIVVKIA+YDFF +HDTH+LPAVR A++AVSKEL DVV
Sbjct: 181 YKDNLKKFFTDIRDDIKPRFLPIIVVKIALYDFFRQHDTHNLPAVREAKEAVSKELPDVV 240

Query: 241 TIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
            ID+L+LPIN+TTN GIN DHGHFNTTTEI LGKWLA+TYLSH+G LL
Sbjct: 241 AIDSLKLPINYTTNEGINLDHGHFNTTTEITLGKWLAETYLSHFGQLL 288

[Close]

BLAST of Lsi05G010980.1 vs. TrEMBL
Match: E5GB85_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.8e-107
Identity = 189/288 (65.62%), Postives = 223/288 (77.43%), Query Frame = 1


Query: 1   MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPE 60
           MAL+ LS++LC MLF PSLSGA SP+NIFIL GQSNMAGRGGVEK+ SG+  WDG++PP+
Sbjct: 4   MALVKLSILLCAMLFGPSLSGAVSPQNIFILGGQSNMAGRGGVEKNSSGKFEWDGVIPPD 63

Query: 61  CQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIP 120
           C+P PSILR N  RQWE AREPLH  ID+ K  GI PGM FAH+LL K  P AGVVGL+P
Sbjct: 64  CKPNPSILRLNAARQWEVAREPLHWDIDVMKANGISPGMGFAHELLVKAGPRAGVVGLVP 123

Query: 121 CARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKR 180
            A GGT I QW+KN S P+AT+YQN +ERI+ASDKEGGVVRAL WFQGESDAA+ + A  
Sbjct: 124 TAIGGTFIRQWLKNDSYPNATYYQNLVERIQASDKEGGVVRALLWFQGESDAAVKEEAIN 183

Query: 181 YKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVV 240
           YKDNLK F  D+R DI+PRFLP+I+VKIA+YDF   + T +L  VRAA++AVSKE+ DV 
Sbjct: 184 YKDNLKTFIMDLRRDIQPRFLPVIIVKIALYDFLRANATDNLSIVRAAQEAVSKEVPDVS 243

Query: 241 TIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
            ID+ +LP+N  T  G N D GHFNTT E+  GKWLAD YLS Y  LL
Sbjct: 244 IIDSWKLPMNLKTREGFNLDRGHFNTTIELTAGKWLADAYLSRYSRLL 291

[Close]

BLAST of Lsi05G010980.1 vs. TrEMBL
Match: A0A0A0KAL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G135410 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.3e-93
Identity = 164/190 (86.32%), Postives = 176/190 (92.63%), Query Frame = 1


Query: 99  MPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGG 158
           MPFAH+LLAKV PNAG VGL+PCARGGTLIE+W+KNPSNP ATFYQNFIERIKASDK+GG
Sbjct: 1   MPFAHELLAKVGPNAGAVGLVPCARGGTLIEEWVKNPSNPSATFYQNFIERIKASDKDGG 60

Query: 159 VVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHD 218
           VVRALFWFQGESDAAM+DTA RYKDNLK FFTDIRNDIKPRFLPIIVVKIA+YDF M+HD
Sbjct: 61  VVRALFWFQGESDAAMNDTAIRYKDNLKKFFTDIRNDIKPRFLPIIVVKIALYDFMMQHD 120

Query: 219 THDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLAD 278
           TH+LPAVR A+DAVSKEL DVV ID+LELPIN TTN G N DHGHFNTTTEI LGKWLA+
Sbjct: 121 THNLPAVREAQDAVSKELPDVVAIDSLELPINLTTNEGFNLDHGHFNTTTEITLGKWLAN 180

Query: 279 TYLSHYGHLL 289
           TYLSHYGHLL
Sbjct: 181 TYLSHYGHLL 190

[Close]

BLAST of Lsi05G010980.1 vs. TrEMBL
Match: A0A0A0LKQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356050 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.1e-67
Identity = 123/195 (63.08%), Postives = 151/195 (77.44%), Query Frame = 1


Query: 94  GIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKAS 153
           GI PGM FAH++L K  P AGVVGL+P A GGT+I QW+KN ++P+AT+YQ+ +ERIKAS
Sbjct: 32  GISPGMGFAHEILRKAGPRAGVVGLVPTAIGGTVIRQWMKNTTDPNATYYQHLVERIKAS 91

Query: 154 DKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDF 213
           DK+GGVVRAL WFQGESDAA+ D A  YKDNLK    D+RND+KPRFLP+I+VKIAIYDF
Sbjct: 92  DKDGGVVRALLWFQGESDAAVKDYAINYKDNLKTLINDLRNDLKPRFLPVILVKIAIYDF 151

Query: 214 FMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILG 273
           F  + T +L  VRAA++AVS E+ DV  ID+ +LP+N TT  G N D GHFN+T  +  G
Sbjct: 152 FAVNGTDNLSTVRAAQEAVSNEVPDVSIIDSWKLPMNLTTREGFNLDRGHFNSTVLLTAG 211

Query: 274 KWLADTYLSHYGHLL 289
           +WLADTYLS Y  LL
Sbjct: 212 RWLADTYLSRYSQLL 226

[Close]

BLAST of Lsi05G010980.1 vs. TrEMBL
Match: A0A0A0K9J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G058180 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59
Identity = 122/270 (45.19%), Postives = 166/270 (61.48%), Query Frame = 1


Query: 18  SLSGAASPKNIFILAGQSNMAGRGGVEKDQSGE-LVWDGLVPPECQPEPSILRFNPTRQW 77
           S     SP NIFILAGQSNMAGRGGV  D + + +VWDG +P EC+   SI R N    W
Sbjct: 7   SPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVW 66

Query: 78  ETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPS 137
           E A EPLH  ID+ KT GIGPGM FA++LLA      G +GL+PCA GG+ +++W+K  +
Sbjct: 67  EQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTN 126

Query: 138 NPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDI 197
                 Y N +ERI+AS+K GG V+ + W+QGESDAA+ + A  Y+  L  FF D+R D 
Sbjct: 127 R-----YDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADT 186

Query: 198 KPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAG 257
               LPII+VK+  +DFF+  +      V  A +AV+  L +V  +D      NF  + G
Sbjct: 187 NHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNF--DDG 246

Query: 258 INQDHGHFNTTTEIILGKWLADTYLSHYGH 287
           +N+D GH N  +E+ LGK  A ++ S++ H
Sbjct: 247 LNEDKGHLNVKSEVKLGKMFAHSFYSNFAH 269

[Close]

BLAST of Lsi05G010980.1 vs. TAIR10
Match: AT4G34215.1 (AT4G34215.1 Domain of unknown function (DUF303) )

HSP 1 Score: 191.8 bits (486), Expect = 5.8e-49
Identity = 103/269 (38.29%), Postives = 151/269 (56.13%), Query Frame = 1


Query: 17  PSLSGAASPKNIFILAGQSNMAGRGGVEKDQ-SGELVWDGLVPPECQPEPSILRFNPTRQ 76
           P +     P  IFIL+GQSNMAGRGGV KD  +   VWD ++PPEC P  SILR +   +
Sbjct: 13  PEIQSPIPPNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLR 72

Query: 77  WETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNP 136
           WE A EPLH  ID  K  G+GPGM FA+ +  ++  ++ V+GL+PCA GGT I++W +  
Sbjct: 73  WEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERG- 132

Query: 137 SNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRND 196
               +  Y+  ++R + S K GG ++A+ W+QGESD      A+ Y +N+     ++R+D
Sbjct: 133 ----SHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHD 192

Query: 197 IKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNA 256
           +    LPII V IA    ++          +  E  +  +LS+VV +DA  LP       
Sbjct: 193 LNLPSLPIIQVAIASGGGYID---------KVREAQLGLKLSNVVCVDAKGLP------- 252

Query: 257 GINQDHGHFNTTTEIILGKWLADTYLSHY 285
            +  D+ H  T  ++ LG  LA  YLS++
Sbjct: 253 -LKSDNLHLTTEAQVQLGLSLAQAYLSNF 259

[Close]

BLAST of Lsi05G010980.1 vs. TAIR10
Match: AT3G53010.1 (AT3G53010.1 Domain of unknown function (DUF303) )

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 110/259 (42.47%), Postives = 153/259 (59.07%), Query Frame = 1


Query: 27  NIFILAGQSNMAGRGGVEKDQS-GELVWDGLVPPECQPEPSILRFNPTRQWETAREPLHD 86
           +IFILAGQSNMAGRGGV  D +    VWDG++PPEC+  PSILR     +W+ A+EPLH 
Sbjct: 30  SIFILAGQSNMAGRGGVYNDTATNTTVWDGVIPPECRSNPSILRLTSKLEWKEAKEPLHV 89

Query: 87  GIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQN 146
            IDINKT G+GPGMPFA++++ +     G VGL+PC+ GGT + QW K         Y+ 
Sbjct: 90  DIDINKTNGVGPGMPFANRVVNRF----GQVGLVPCSIGGTKLSQWQKG-----EFLYEE 149

Query: 147 FIERIKA--SDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPI 206
            ++R KA  +   GG  RA+ W+QGESD      A  YK  L  FF+D+RND++   LPI
Sbjct: 150 TVKRAKAAMASGGGGSYRAVLWYQGESDTVDMVDASVYKKRLVKFFSDLRNDLQHPNLPI 209

Query: 207 IVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGH 266
           I V +A            L AVR A+  +  +L +V  +DA  LP        +  D  H
Sbjct: 210 IQVALA------TGAGPYLDAVRKAQ--LKTDLENVYCVDARGLP--------LEPDGLH 263

Query: 267 FNTTTEIILGKWLADTYLS 283
             T++++ LG  +A+++L+
Sbjct: 270 LTTSSQVQLGHMIAESFLA 263

[Close]

BLAST of Lsi05G010980.1 vs. NCBI nr
Match: gi|778671052|ref|XP_011649575.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 3.8e-135
Identity = 234/288 (81.25%), Postives = 256/288 (88.89%), Query Frame = 1


Query: 1   MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPE 60
           M LL LS++LC ML+ PSLSGAASPKNIFILAGQSNMAGRGGVE +  G L WDGLVPPE
Sbjct: 1   MVLLRLSIILCVMLYGPSLSGAASPKNIFILAGQSNMAGRGGVENNAQGNLQWDGLVPPE 60

Query: 61  CQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIP 120
           CQP+PSILR NP  QWE AREPLH GIDI +T GIGPG+ FAH+LL K  PNAG VGL+P
Sbjct: 61  CQPQPSILRLNPGLQWEIAREPLHLGIDIKRTPGIGPGIAFAHELLVKAGPNAGAVGLVP 120

Query: 121 CARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKR 180
           CARGGTLIEQWIKNPSNP ATFYQNFIERIKASDK+GGVVRALFWFQGESDAAM+DTA R
Sbjct: 121 CARGGTLIEQWIKNPSNPSATFYQNFIERIKASDKDGGVVRALFWFQGESDAAMNDTAIR 180

Query: 181 YKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVV 240
           YKDNLK FFTDIR+DIKPRFLPIIVVKIA+YDFF +HDTH+LPAVR A++AVSKEL DVV
Sbjct: 181 YKDNLKKFFTDIRDDIKPRFLPIIVVKIALYDFFRQHDTHNLPAVREAKEAVSKELPDVV 240

Query: 241 TIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
            ID+L+LPIN+TTN GIN DHGHFNTTTEI LGKWLA+TYLSH+G LL
Sbjct: 241 AIDSLKLPINYTTNEGINLDHGHFNTTTEITLGKWLAETYLSHFGQLL 288

[Close]

BLAST of Lsi05G010980.1 vs. NCBI nr
Match: gi|659133975|ref|XP_008466975.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo])

HSP 1 Score: 461.5 bits (1186), Expect = 1.1e-126
Identity = 214/252 (84.92%), Postives = 231/252 (91.67%), Query Frame = 1


Query: 37  MAGRGGVEKDQSGELVWDGLVPPECQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIG 96
           MAGRGGVEKDQSG LVWD LVPPEC+P+PSILR NP R+WETAREPLH GIDIN+T GIG
Sbjct: 1   MAGRGGVEKDQSGNLVWDRLVPPECEPQPSILRLNPEREWETAREPLHVGIDINRTAGIG 60

Query: 97  PGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKE 156
           PGMPFAH LLAK  PNAGVVGL+PCARGGTLIEQWIKNPSNP+ATFY+NFIERIKASDK+
Sbjct: 61  PGMPFAHHLLAKAGPNAGVVGLVPCARGGTLIEQWIKNPSNPNATFYKNFIERIKASDKD 120

Query: 157 GGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMK 216
           GGVVRALFWFQGESDAAMSDTA RYKDNLK FFTDIRNDIKPRFLPII+ KIA+YD FMK
Sbjct: 121 GGVVRALFWFQGESDAAMSDTAHRYKDNLKQFFTDIRNDIKPRFLPIILAKIAVYDPFMK 180

Query: 217 HDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWL 276
           HDTHDL AVRAA++ VSKEL D++TIDAL+LPINFTTNAG N DH HFNT TEI++GKW 
Sbjct: 181 HDTHDLAAVRAAQEEVSKELPDILTIDALQLPINFTTNAGFNLDHAHFNTNTEIVVGKWF 240

Query: 277 ADTYLSHYGHLL 289
           ADTYLSHYGHLL
Sbjct: 241 ADTYLSHYGHLL 252

[Close]

BLAST of Lsi05G010980.1 vs. NCBI nr
Match: gi|778722113|ref|XP_011658406.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 8.0e-125
Identity = 213/252 (84.52%), Postives = 228/252 (90.48%), Query Frame = 1


Query: 37  MAGRGGVEKDQSGELVWDGLVPPECQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIG 96
           MAGRGGVE +  G L+WDGLVPPECQ EPSILR NP RQWE AREPLH GIDIN+T GIG
Sbjct: 1   MAGRGGVENNNKGNLMWDGLVPPECQSEPSILRLNPDRQWEIAREPLHLGIDINRTPGIG 60

Query: 97  PGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKE 156
           PGMPFAH+LLAKV PNAG VGL+PCARGGTLIE+W+KNPSNP ATFYQNFIERIKASDK+
Sbjct: 61  PGMPFAHELLAKVGPNAGAVGLVPCARGGTLIEEWVKNPSNPSATFYQNFIERIKASDKD 120

Query: 157 GGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMK 216
           GGVVRALFWFQGESDAAM+DTA RYKDNLK FFTDIRNDIKPRFLPIIVVKIA+YDF M+
Sbjct: 121 GGVVRALFWFQGESDAAMNDTAIRYKDNLKKFFTDIRNDIKPRFLPIIVVKIALYDFMMQ 180

Query: 217 HDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWL 276
           HDTH+LPAVR A+DAVSKEL DVV ID+LELPIN TTN G N DHGHFNTTTEI LGKWL
Sbjct: 181 HDTHNLPAVREAQDAVSKELPDVVAIDSLELPINLTTNEGFNLDHGHFNTTTEITLGKWL 240

Query: 277 ADTYLSHYGHLL 289
           A+TYLSHYGHLL
Sbjct: 241 ANTYLSHYGHLL 252

[Close]

BLAST of Lsi05G010980.1 vs. NCBI nr
Match: gi|659087703|ref|XP_008444593.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo])

HSP 1 Score: 430.3 bits (1105), Expect = 2.7e-117
Identity = 204/288 (70.83%), Postives = 237/288 (82.29%), Query Frame = 1


Query: 1   MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPE 60
           MAL+ LS++LC MLF PSLSGA SP+NIFIL GQSNMAGRGGVEK+ SG+  WDG++PP+
Sbjct: 4   MALVKLSILLCAMLFGPSLSGAVSPQNIFILGGQSNMAGRGGVEKNSSGKFEWDGVIPPD 63

Query: 61  CQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIP 120
           C+P PSILR N  RQWE AREPLH  ID+ K  GI PGM FAH+LL K  P AGVVGL+P
Sbjct: 64  CKPNPSILRLNAARQWEVAREPLHWDIDVMKANGISPGMGFAHELLVKAGPRAGVVGLVP 123

Query: 121 CARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKR 180
            A GGT I QW+KN S P+AT+YQN +ERI+ASDKEGGVVRAL WFQGESDAA+ + A  
Sbjct: 124 TAIGGTFIRQWLKNDSYPNATYYQNLVERIQASDKEGGVVRALLWFQGESDAAVKEEAIN 183

Query: 181 YKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVV 240
           YKDNLK F  D+R DI+PRFLP+I+VKIA+YDF   + T +L  VRAA++AVSKEL DVV
Sbjct: 184 YKDNLKTFIMDLRRDIQPRFLPVIIVKIALYDFLRANATDNLSIVRAAQEAVSKELPDVV 243

Query: 241 TIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
           TIDALELPINFTTN G+N DHGHFNT+TEI LGKWLA+TYLSH+GHLL
Sbjct: 244 TIDALELPINFTTNEGLNLDHGHFNTSTEITLGKWLANTYLSHFGHLL 291

[Close]

BLAST of Lsi05G010980.1 vs. NCBI nr
Match: gi|778730862|ref|XP_011659870.1| (PREDICTED: probable carbohydrate esterase At4g34215, partial [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 4.2e-110
Identity = 190/231 (82.25%), Postives = 208/231 (90.04%), Query Frame = 1


Query: 58  PPECQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVG 117
           PPECQP+PSILR NP  QWE AREPLH GIDI +T GIGPG+ FAH+LL K  PNAG VG
Sbjct: 1   PPECQPQPSILRLNPGLQWEIAREPLHLGIDIKRTPGIGPGIAFAHELLVKAGPNAGAVG 60

Query: 118 LIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDT 177
           L+PCARGGTLIEQWIKNPSNP ATFYQNFIERIKASDK+GGVVRALFWFQGESDAAM+DT
Sbjct: 61  LVPCARGGTLIEQWIKNPSNPSATFYQNFIERIKASDKDGGVVRALFWFQGESDAAMNDT 120

Query: 178 AKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELS 237
           A RYKDNLK FFTDIR+DIKPRFLPIIVVKIA+YDFF +HDTH+LPAVR A++AVSKEL 
Sbjct: 121 AIRYKDNLKKFFTDIRDDIKPRFLPIIVVKIALYDFFRQHDTHNLPAVREAQEAVSKELP 180

Query: 238 DVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
           DVV ID+L+LPIN+TTN GIN DHGHFNTTTEI LGKWLA+TYLSH+G LL
Sbjct: 181 DVVAIDSLKLPINYTTNEGINLDHGHFNTTTEITLGKWLAETYLSHFGQLL 231

The following BLAST results are available for this feature:

BLAST of Lsi05G010980.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CAES_ARATH	1.0e-47	38.29	Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE...	[more]

BLAST of Lsi05G010980.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNC5_CUCSA	2.7e-135	81.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356040 PE=4 SV=1	[more]
E5GB85_CUCME	1.8e-107	65.63	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KAL7_CUCSA	4.3e-93	86.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G135410 PE=4 SV=1	[more]
A0A0A0LKQ6_CUCSA	3.1e-67	63.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356050 PE=4 SV=1	[more]
A0A0A0K9J9_CUCSA	1.8e-59	45.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G058180 PE=4 SV=1	[more]

BLAST of Lsi05G010980.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34215.1	5.8e-49	38.29	Domain of unknown function (DUF303)	[more]
AT3G53010.1	1.7e-48	42.47	Domain of unknown function (DUF303)	[more]

BLAST of Lsi05G010980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778671052\|ref\|XP_011649575.1\|	3.8e-135	81.25	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus]	[more]
gi\|659133975\|ref\|XP_008466975.1\|	1.1e-126	84.92	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]	[more]
gi\|778722113\|ref\|XP_011658406.1\|	8.0e-125	84.52	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus]	[more]
gi\|659087703\|ref\|XP_008444593.1\|	2.7e-117	70.83	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]	[more]
gi\|778730862\|ref\|XP_011659870.1\|	4.2e-110	82.25	PREDICTED: probable carbohydrate esterase At4g34215, partial [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005181	SASA

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G010980	Lsi05G010980	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G010980.1.CDS.1	Lsi05G010980.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G010980.1	Lsi05G010980.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005181	Sialate O-acetylesterase domain	PFAM	PF03629	SASA	coord: 160..243 score: 6.
None	No IPR available	PANTHER	PTHR31988	FAMILY NOT NAMED	coord: 26..282 score: 6.2
None	No IPR available	PANTHER	PTHR31988:SF4	SUBFAMILY NOT NAMED	coord: 26..282 score: 6.2