Lsi05G010980 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G010980
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Carbohydrate esterase plant-like protein
Location	chr05 : 18760021 .. 18760887 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGTTGGGACTATCGGTCATGTTATGTACGATGCTATTTAGCCCTTCCCTTTCAGGGGCTGCTTCTCCTAAGAACATATTCATCCTCGCCGGTCAAAGCAACATGGCCGGTCGAGGTGGGGTTGAGAAAGATCAATCGGGAGAACTCGTGTGGGATGGGTTGGTCCCACCAGAATGTCAACCTGAACCATCCATCCTACGATTTAACCCCACGCGCCAATGGGAGACAGCTCGAGAGCCTCTCCACGACGGAATTGACATCAACAAGACAGTTGGGATTGGACCAGGTATGCCATTTGCTCACCAACTGCTAGCCAAAGTCAGGCCAAATGCTGGCGTTGTGGGTTTAATCCCTTGTGCTAGAGGTGGCACTTTAATTGAACAATGGATTAAAAATCCTAGCAATCCTGATGCAACTTTTTACCAAAATTTTATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTGCGTGCTCTTTTTTGGTTTCAAGGGGAAAGTGATGCAGCTATGAGCGACACTGCTAAGAGATACAAGGACAACCTAAAAAATTTCTTCACCGACATCCGCAATGACATAAAGCCTAGATTTTTGCCAATCATTGTTGTTAAAATTGCCATCTATGACTTTTTTATGAAGCACGATACTCATGATTTGCCAGCAGTGAGGGCAGCAGAAGATGCAGTTAGCAAGGAGCTGTCGGATGTGGTGACCATTGATGCCTTGGAATTACCTATAAACTTTACAACAAATGCAGGCATTAACCAAGATCATGGTCATTTTAATACCACAACTGAGATTATTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGTCATTTACTTTAA

mRNA sequence

ATGGCTTTGTTGGGACTATCGGTCATGTTATGTACGATGCTATTTAGCCCTTCCCTTTCAGGGGCTGCTTCTCCTAAGAACATATTCATCCTCGCCGGTCAAAGCAACATGGCCGGTCGAGGTGGGGTTGAGAAAGATCAATCGGGAGAACTCGTGTGGGATGGGTTGGTCCCACCAGAATGTCAACCTGAACCATCCATCCTACGATTTAACCCCACGCGCCAATGGGAGACAGCTCGAGAGCCTCTCCACGACGGAATTGACATCAACAAGACAGTTGGGATTGGACCAGGTATGCCATTTGCTCACCAACTGCTAGCCAAAGTCAGGCCAAATGCTGGCGTTGTGGGTTTAATCCCTTGTGCTAGAGGTGGCACTTTAATTGAACAATGGATTAAAAATCCTAGCAATCCTGATGCAACTTTTTACCAAAATTTTATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTGCGTGCTCTTTTTTGGTTTCAAGGGGAAAGTGATGCAGCTATGAGCGACACTGCTAAGAGATACAAGGACAACCTAAAAAATTTCTTCACCGACATCCGCAATGACATAAAGCCTAGATTTTTGCCAATCATTGTTGTTAAAATTGCCATCTATGACTTTTTTATGAAGCACGATACTCATGATTTGCCAGCAGTGAGGGCAGCAGAAGATGCAGTTAGCAAGGAGCTGTCGGATGTGGTGACCATTGATGCCTTGGAATTACCTATAAACTTTACAACAAATGCAGGCATTAACCAAGATCATGGTCATTTTAATACCACAACTGAGATTATTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGTCATTTACTTTAA

Coding sequence (CDS)

ATGGCTTTGTTGGGACTATCGGTCATGTTATGTACGATGCTATTTAGCCCTTCCCTTTCAGGGGCTGCTTCTCCTAAGAACATATTCATCCTCGCCGGTCAAAGCAACATGGCCGGTCGAGGTGGGGTTGAGAAAGATCAATCGGGAGAACTCGTGTGGGATGGGTTGGTCCCACCAGAATGTCAACCTGAACCATCCATCCTACGATTTAACCCCACGCGCCAATGGGAGACAGCTCGAGAGCCTCTCCACGACGGAATTGACATCAACAAGACAGTTGGGATTGGACCAGGTATGCCATTTGCTCACCAACTGCTAGCCAAAGTCAGGCCAAATGCTGGCGTTGTGGGTTTAATCCCTTGTGCTAGAGGTGGCACTTTAATTGAACAATGGATTAAAAATCCTAGCAATCCTGATGCAACTTTTTACCAAAATTTTATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTGCGTGCTCTTTTTTGGTTTCAAGGGGAAAGTGATGCAGCTATGAGCGACACTGCTAAGAGATACAAGGACAACCTAAAAAATTTCTTCACCGACATCCGCAATGACATAAAGCCTAGATTTTTGCCAATCATTGTTGTTAAAATTGCCATCTATGACTTTTTTATGAAGCACGATACTCATGATTTGCCAGCAGTGAGGGCAGCAGAAGATGCAGTTAGCAAGGAGCTGTCGGATGTGGTGACCATTGATGCCTTGGAATTACCTATAAACTTTACAACAAATGCAGGCATTAACCAAGATCATGGTCATTTTAATACCACAACTGAGATTATTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGTCATTTACTTTAA

Protein sequence

MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPECQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL

Homology

[Close]

BLAST of Lsi05G010980 vs. Swiss-Prot
Match: CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-47
Identity = 103/269 (38.29%), Postives = 151/269 (56.13%), Query Frame = 1


Query: 17  PSLSGAASPKNIFILAGQSNMAGRGGVEKDQ-SGELVWDGLVPPECQPEPSILRFNPTRQ 76
           P +     P  IFIL+GQSNMAGRGGV KD  +   VWD ++PPEC P  SILR +   +
Sbjct: 13  PEIQSPIPPNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLR 72

Query: 77  WETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNP 136
           WE A EPLH  ID  K  G+GPGM FA+ +  ++  ++ V+GL+PCA GGT I++W +  
Sbjct: 73  WEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERG- 132

Query: 137 SNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRND 196
               +  Y+  ++R + S K GG ++A+ W+QGESD      A+ Y +N+     ++R+D
Sbjct: 133 ----SHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHD 192

Query: 197 IKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNA 256
           +    LPII V IA    ++          +  E  +  +LS+VV +DA  LP       
Sbjct: 193 LNLPSLPIIQVAIASGGGYID---------KVREAQLGLKLSNVVCVDAKGLP------- 252

Query: 257 GINQDHGHFNTTTEIILGKWLADTYLSHY 285
            +  D+ H  T  ++ LG  LA  YLS++
Sbjct: 253 -LKSDNLHLTTEAQVQLGLSLAQAYLSNF 259

[Close]

BLAST of Lsi05G010980 vs. TrEMBL
Match: A0A0A0LNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356040 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.7e-135
Identity = 234/288 (81.25%), Postives = 256/288 (88.89%), Query Frame = 1


Query: 1   MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPE 60
           M LL LS++LC ML+ PSLSGAASPKNIFILAGQSNMAGRGGVE +  G L WDGLVPPE
Sbjct: 1   MVLLRLSIILCVMLYGPSLSGAASPKNIFILAGQSNMAGRGGVENNAQGNLQWDGLVPPE 60

Query: 61  CQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIP 120
           CQP+PSILR NP  QWE AREPLH GIDI +T GIGPG+ FAH+LL K  PNAG VGL+P
Sbjct: 61  CQPQPSILRLNPGLQWEIAREPLHLGIDIKRTPGIGPGIAFAHELLVKAGPNAGAVGLVP 120

Query: 121 CARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKR 180
           CARGGTLIEQWIKNPSNP ATFYQNFIERIKASDK+GGVVRALFWFQGESDAAM+DTA R
Sbjct: 121 CARGGTLIEQWIKNPSNPSATFYQNFIERIKASDKDGGVVRALFWFQGESDAAMNDTAIR 180

Query: 181 YKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVV 240
           YKDNLK FFTDIR+DIKPRFLPIIVVKIA+YDFF +HDTH+LPAVR A++AVSKEL DVV
Sbjct: 181 YKDNLKKFFTDIRDDIKPRFLPIIVVKIALYDFFRQHDTHNLPAVREAKEAVSKELPDVV 240

Query: 241 TIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
            ID+L+LPIN+TTN GIN DHGHFNTTTEI LGKWLA+TYLSH+G LL
Sbjct: 241 AIDSLKLPINYTTNEGINLDHGHFNTTTEITLGKWLAETYLSHFGQLL 288

[Close]

BLAST of Lsi05G010980 vs. TrEMBL
Match: E5GB85_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.8e-107
Identity = 189/288 (65.62%), Postives = 223/288 (77.43%), Query Frame = 1


Query: 1   MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPE 60
           MAL+ LS++LC MLF PSLSGA SP+NIFIL GQSNMAGRGGVEK+ SG+  WDG++PP+
Sbjct: 4   MALVKLSILLCAMLFGPSLSGAVSPQNIFILGGQSNMAGRGGVEKNSSGKFEWDGVIPPD 63

Query: 61  CQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIP 120
           C+P PSILR N  RQWE AREPLH  ID+ K  GI PGM FAH+LL K  P AGVVGL+P
Sbjct: 64  CKPNPSILRLNAARQWEVAREPLHWDIDVMKANGISPGMGFAHELLVKAGPRAGVVGLVP 123

Query: 121 CARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKR 180
            A GGT I QW+KN S P+AT+YQN +ERI+ASDKEGGVVRAL WFQGESDAA+ + A  
Sbjct: 124 TAIGGTFIRQWLKNDSYPNATYYQNLVERIQASDKEGGVVRALLWFQGESDAAVKEEAIN 183

Query: 181 YKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVV 240
           YKDNLK F  D+R DI+PRFLP+I+VKIA+YDF   + T +L  VRAA++AVSKE+ DV 
Sbjct: 184 YKDNLKTFIMDLRRDIQPRFLPVIIVKIALYDFLRANATDNLSIVRAAQEAVSKEVPDVS 243

Query: 241 TIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
            ID+ +LP+N  T  G N D GHFNTT E+  GKWLAD YLS Y  LL
Sbjct: 244 IIDSWKLPMNLKTREGFNLDRGHFNTTIELTAGKWLADAYLSRYSRLL 291

[Close]

BLAST of Lsi05G010980 vs. TrEMBL
Match: A0A0A0KAL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G135410 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.3e-93
Identity = 164/190 (86.32%), Postives = 176/190 (92.63%), Query Frame = 1


Query: 99  MPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGG 158
           MPFAH+LLAKV PNAG VGL+PCARGGTLIE+W+KNPSNP ATFYQNFIERIKASDK+GG
Sbjct: 1   MPFAHELLAKVGPNAGAVGLVPCARGGTLIEEWVKNPSNPSATFYQNFIERIKASDKDGG 60

Query: 159 VVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHD 218
           VVRALFWFQGESDAAM+DTA RYKDNLK FFTDIRNDIKPRFLPIIVVKIA+YDF M+HD
Sbjct: 61  VVRALFWFQGESDAAMNDTAIRYKDNLKKFFTDIRNDIKPRFLPIIVVKIALYDFMMQHD 120

Query: 219 THDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLAD 278
           TH+LPAVR A+DAVSKEL DVV ID+LELPIN TTN G N DHGHFNTTTEI LGKWLA+
Sbjct: 121 THNLPAVREAQDAVSKELPDVVAIDSLELPINLTTNEGFNLDHGHFNTTTEITLGKWLAN 180

Query: 279 TYLSHYGHLL 289
           TYLSHYGHLL
Sbjct: 181 TYLSHYGHLL 190

[Close]

BLAST of Lsi05G010980 vs. TrEMBL
Match: A0A0A0LKQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356050 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.1e-67
Identity = 123/195 (63.08%), Postives = 151/195 (77.44%), Query Frame = 1


Query: 94  GIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKAS 153
           GI PGM FAH++L K  P AGVVGL+P A GGT+I QW+KN ++P+AT+YQ+ +ERIKAS
Sbjct: 32  GISPGMGFAHEILRKAGPRAGVVGLVPTAIGGTVIRQWMKNTTDPNATYYQHLVERIKAS 91

Query: 154 DKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDF 213
           DK+GGVVRAL WFQGESDAA+ D A  YKDNLK    D+RND+KPRFLP+I+VKIAIYDF
Sbjct: 92  DKDGGVVRALLWFQGESDAAVKDYAINYKDNLKTLINDLRNDLKPRFLPVILVKIAIYDF 151

Query: 214 FMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILG 273
           F  + T +L  VRAA++AVS E+ DV  ID+ +LP+N TT  G N D GHFN+T  +  G
Sbjct: 152 FAVNGTDNLSTVRAAQEAVSNEVPDVSIIDSWKLPMNLTTREGFNLDRGHFNSTVLLTAG 211

Query: 274 KWLADTYLSHYGHLL 289
           +WLADTYLS Y  LL
Sbjct: 212 RWLADTYLSRYSQLL 226

[Close]

BLAST of Lsi05G010980 vs. TrEMBL
Match: A0A0A0K9J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G058180 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59
Identity = 122/270 (45.19%), Postives = 166/270 (61.48%), Query Frame = 1


Query: 18  SLSGAASPKNIFILAGQSNMAGRGGVEKDQSGE-LVWDGLVPPECQPEPSILRFNPTRQW 77
           S     SP NIFILAGQSNMAGRGGV  D + + +VWDG +P EC+   SI R N    W
Sbjct: 7   SPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVW 66

Query: 78  ETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPS 137
           E A EPLH  ID+ KT GIGPGM FA++LLA      G +GL+PCA GG+ +++W+K  +
Sbjct: 67  EQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTN 126

Query: 138 NPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDI 197
                 Y N +ERI+AS+K GG V+ + W+QGESDAA+ + A  Y+  L  FF D+R D 
Sbjct: 127 R-----YDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADT 186

Query: 198 KPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAG 257
               LPII+VK+  +DFF+  +      V  A +AV+  L +V  +D      NF  + G
Sbjct: 187 NHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNF--DDG 246

Query: 258 INQDHGHFNTTTEIILGKWLADTYLSHYGH 287
           +N+D GH N  +E+ LGK  A ++ S++ H
Sbjct: 247 LNEDKGHLNVKSEVKLGKMFAHSFYSNFAH 269

[Close]

BLAST of Lsi05G010980 vs. TAIR10
Match: AT4G34215.1 (AT4G34215.1 Domain of unknown function (DUF303) )

HSP 1 Score: 191.8 bits (486), Expect = 5.8e-49
Identity = 103/269 (38.29%), Postives = 151/269 (56.13%), Query Frame = 1


Query: 17  PSLSGAASPKNIFILAGQSNMAGRGGVEKDQ-SGELVWDGLVPPECQPEPSILRFNPTRQ 76
           P +     P  IFIL+GQSNMAGRGGV KD  +   VWD ++PPEC P  SILR +   +
Sbjct: 13  PEIQSPIPPNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLR 72

Query: 77  WETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNP 136
           WE A EPLH  ID  K  G+GPGM FA+ +  ++  ++ V+GL+PCA GGT I++W +  
Sbjct: 73  WEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERG- 132

Query: 137 SNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRND 196
               +  Y+  ++R + S K GG ++A+ W+QGESD      A+ Y +N+     ++R+D
Sbjct: 133 ----SHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHD 192

Query: 197 IKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNA 256
           +    LPII V IA    ++          +  E  +  +LS+VV +DA  LP       
Sbjct: 193 LNLPSLPIIQVAIASGGGYID---------KVREAQLGLKLSNVVCVDAKGLP------- 252

Query: 257 GINQDHGHFNTTTEIILGKWLADTYLSHY 285
            +  D+ H  T  ++ LG  LA  YLS++
Sbjct: 253 -LKSDNLHLTTEAQVQLGLSLAQAYLSNF 259

[Close]

BLAST of Lsi05G010980 vs. TAIR10
Match: AT3G53010.1 (AT3G53010.1 Domain of unknown function (DUF303) )

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 110/259 (42.47%), Postives = 153/259 (59.07%), Query Frame = 1


Query: 27  NIFILAGQSNMAGRGGVEKDQS-GELVWDGLVPPECQPEPSILRFNPTRQWETAREPLHD 86
           +IFILAGQSNMAGRGGV  D +    VWDG++PPEC+  PSILR     +W+ A+EPLH 
Sbjct: 30  SIFILAGQSNMAGRGGVYNDTATNTTVWDGVIPPECRSNPSILRLTSKLEWKEAKEPLHV 89

Query: 87  GIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQN 146
            IDINKT G+GPGMPFA++++ +     G VGL+PC+ GGT + QW K         Y+ 
Sbjct: 90  DIDINKTNGVGPGMPFANRVVNRF----GQVGLVPCSIGGTKLSQWQKG-----EFLYEE 149

Query: 147 FIERIKA--SDKEGGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPI 206
            ++R KA  +   GG  RA+ W+QGESD      A  YK  L  FF+D+RND++   LPI
Sbjct: 150 TVKRAKAAMASGGGGSYRAVLWYQGESDTVDMVDASVYKKRLVKFFSDLRNDLQHPNLPI 209

Query: 207 IVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGH 266
           I V +A            L AVR A+  +  +L +V  +DA  LP        +  D  H
Sbjct: 210 IQVALA------TGAGPYLDAVRKAQ--LKTDLENVYCVDARGLP--------LEPDGLH 263

Query: 267 FNTTTEIILGKWLADTYLS 283
             T++++ LG  +A+++L+
Sbjct: 270 LTTSSQVQLGHMIAESFLA 263

[Close]

BLAST of Lsi05G010980 vs. NCBI nr
Match: gi|778671052|ref|XP_011649575.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 3.8e-135
Identity = 234/288 (81.25%), Postives = 256/288 (88.89%), Query Frame = 1


Query: 1   MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPE 60
           M LL LS++LC ML+ PSLSGAASPKNIFILAGQSNMAGRGGVE +  G L WDGLVPPE
Sbjct: 1   MVLLRLSIILCVMLYGPSLSGAASPKNIFILAGQSNMAGRGGVENNAQGNLQWDGLVPPE 60

Query: 61  CQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIP 120
           CQP+PSILR NP  QWE AREPLH GIDI +T GIGPG+ FAH+LL K  PNAG VGL+P
Sbjct: 61  CQPQPSILRLNPGLQWEIAREPLHLGIDIKRTPGIGPGIAFAHELLVKAGPNAGAVGLVP 120

Query: 121 CARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKR 180
           CARGGTLIEQWIKNPSNP ATFYQNFIERIKASDK+GGVVRALFWFQGESDAAM+DTA R
Sbjct: 121 CARGGTLIEQWIKNPSNPSATFYQNFIERIKASDKDGGVVRALFWFQGESDAAMNDTAIR 180

Query: 181 YKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVV 240
           YKDNLK FFTDIR+DIKPRFLPIIVVKIA+YDFF +HDTH+LPAVR A++AVSKEL DVV
Sbjct: 181 YKDNLKKFFTDIRDDIKPRFLPIIVVKIALYDFFRQHDTHNLPAVREAKEAVSKELPDVV 240

Query: 241 TIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
            ID+L+LPIN+TTN GIN DHGHFNTTTEI LGKWLA+TYLSH+G LL
Sbjct: 241 AIDSLKLPINYTTNEGINLDHGHFNTTTEITLGKWLAETYLSHFGQLL 288

[Close]

BLAST of Lsi05G010980 vs. NCBI nr
Match: gi|659133975|ref|XP_008466975.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo])

HSP 1 Score: 461.5 bits (1186), Expect = 1.1e-126
Identity = 214/252 (84.92%), Postives = 231/252 (91.67%), Query Frame = 1


Query: 37  MAGRGGVEKDQSGELVWDGLVPPECQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIG 96
           MAGRGGVEKDQSG LVWD LVPPEC+P+PSILR NP R+WETAREPLH GIDIN+T GIG
Sbjct: 1   MAGRGGVEKDQSGNLVWDRLVPPECEPQPSILRLNPEREWETAREPLHVGIDINRTAGIG 60

Query: 97  PGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKE 156
           PGMPFAH LLAK  PNAGVVGL+PCARGGTLIEQWIKNPSNP+ATFY+NFIERIKASDK+
Sbjct: 61  PGMPFAHHLLAKAGPNAGVVGLVPCARGGTLIEQWIKNPSNPNATFYKNFIERIKASDKD 120

Query: 157 GGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMK 216
           GGVVRALFWFQGESDAAMSDTA RYKDNLK FFTDIRNDIKPRFLPII+ KIA+YD FMK
Sbjct: 121 GGVVRALFWFQGESDAAMSDTAHRYKDNLKQFFTDIRNDIKPRFLPIILAKIAVYDPFMK 180

Query: 217 HDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWL 276
           HDTHDL AVRAA++ VSKEL D++TIDAL+LPINFTTNAG N DH HFNT TEI++GKW 
Sbjct: 181 HDTHDLAAVRAAQEEVSKELPDILTIDALQLPINFTTNAGFNLDHAHFNTNTEIVVGKWF 240

Query: 277 ADTYLSHYGHLL 289
           ADTYLSHYGHLL
Sbjct: 241 ADTYLSHYGHLL 252

[Close]

BLAST of Lsi05G010980 vs. NCBI nr
Match: gi|778722113|ref|XP_011658406.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 8.0e-125
Identity = 213/252 (84.52%), Postives = 228/252 (90.48%), Query Frame = 1


Query: 37  MAGRGGVEKDQSGELVWDGLVPPECQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIG 96
           MAGRGGVE +  G L+WDGLVPPECQ EPSILR NP RQWE AREPLH GIDIN+T GIG
Sbjct: 1   MAGRGGVENNNKGNLMWDGLVPPECQSEPSILRLNPDRQWEIAREPLHLGIDINRTPGIG 60

Query: 97  PGMPFAHQLLAKVRPNAGVVGLIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKE 156
           PGMPFAH+LLAKV PNAG VGL+PCARGGTLIE+W+KNPSNP ATFYQNFIERIKASDK+
Sbjct: 61  PGMPFAHELLAKVGPNAGAVGLVPCARGGTLIEEWVKNPSNPSATFYQNFIERIKASDKD 120

Query: 157 GGVVRALFWFQGESDAAMSDTAKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMK 216
           GGVVRALFWFQGESDAAM+DTA RYKDNLK FFTDIRNDIKPRFLPIIVVKIA+YDF M+
Sbjct: 121 GGVVRALFWFQGESDAAMNDTAIRYKDNLKKFFTDIRNDIKPRFLPIIVVKIALYDFMMQ 180

Query: 217 HDTHDLPAVRAAEDAVSKELSDVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWL 276
           HDTH+LPAVR A+DAVSKEL DVV ID+LELPIN TTN G N DHGHFNTTTEI LGKWL
Sbjct: 181 HDTHNLPAVREAQDAVSKELPDVVAIDSLELPINLTTNEGFNLDHGHFNTTTEITLGKWL 240

Query: 277 ADTYLSHYGHLL 289
           A+TYLSHYGHLL
Sbjct: 241 ANTYLSHYGHLL 252

[Close]

BLAST of Lsi05G010980 vs. NCBI nr
Match: gi|659087703|ref|XP_008444593.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo])

HSP 1 Score: 430.3 bits (1105), Expect = 2.7e-117
Identity = 204/288 (70.83%), Postives = 237/288 (82.29%), Query Frame = 1


Query: 1   MALLGLSVMLCTMLFSPSLSGAASPKNIFILAGQSNMAGRGGVEKDQSGELVWDGLVPPE 60
           MAL+ LS++LC MLF PSLSGA SP+NIFIL GQSNMAGRGGVEK+ SG+  WDG++PP+
Sbjct: 4   MALVKLSILLCAMLFGPSLSGAVSPQNIFILGGQSNMAGRGGVEKNSSGKFEWDGVIPPD 63

Query: 61  CQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVGLIP 120
           C+P PSILR N  RQWE AREPLH  ID+ K  GI PGM FAH+LL K  P AGVVGL+P
Sbjct: 64  CKPNPSILRLNAARQWEVAREPLHWDIDVMKANGISPGMGFAHELLVKAGPRAGVVGLVP 123

Query: 121 CARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTAKR 180
            A GGT I QW+KN S P+AT+YQN +ERI+ASDKEGGVVRAL WFQGESDAA+ + A  
Sbjct: 124 TAIGGTFIRQWLKNDSYPNATYYQNLVERIQASDKEGGVVRALLWFQGESDAAVKEEAIN 183

Query: 181 YKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELSDVV 240
           YKDNLK F  D+R DI+PRFLP+I+VKIA+YDF   + T +L  VRAA++AVSKEL DVV
Sbjct: 184 YKDNLKTFIMDLRRDIQPRFLPVIIVKIALYDFLRANATDNLSIVRAAQEAVSKELPDVV 243

Query: 241 TIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
           TIDALELPINFTTN G+N DHGHFNT+TEI LGKWLA+TYLSH+GHLL
Sbjct: 244 TIDALELPINFTTNEGLNLDHGHFNTSTEITLGKWLANTYLSHFGHLL 291

[Close]

BLAST of Lsi05G010980 vs. NCBI nr
Match: gi|778730862|ref|XP_011659870.1| (PREDICTED: probable carbohydrate esterase At4g34215, partial [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 4.2e-110
Identity = 190/231 (82.25%), Postives = 208/231 (90.04%), Query Frame = 1


Query: 58  PPECQPEPSILRFNPTRQWETAREPLHDGIDINKTVGIGPGMPFAHQLLAKVRPNAGVVG 117
           PPECQP+PSILR NP  QWE AREPLH GIDI +T GIGPG+ FAH+LL K  PNAG VG
Sbjct: 1   PPECQPQPSILRLNPGLQWEIAREPLHLGIDIKRTPGIGPGIAFAHELLVKAGPNAGAVG 60

Query: 118 LIPCARGGTLIEQWIKNPSNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDT 177
           L+PCARGGTLIEQWIKNPSNP ATFYQNFIERIKASDK+GGVVRALFWFQGESDAAM+DT
Sbjct: 61  LVPCARGGTLIEQWIKNPSNPSATFYQNFIERIKASDKDGGVVRALFWFQGESDAAMNDT 120

Query: 178 AKRYKDNLKNFFTDIRNDIKPRFLPIIVVKIAIYDFFMKHDTHDLPAVRAAEDAVSKELS 237
           A RYKDNLK FFTDIR+DIKPRFLPIIVVKIA+YDFF +HDTH+LPAVR A++AVSKEL 
Sbjct: 121 AIRYKDNLKKFFTDIRDDIKPRFLPIIVVKIALYDFFRQHDTHNLPAVREAQEAVSKELP 180

Query: 238 DVVTIDALELPINFTTNAGINQDHGHFNTTTEIILGKWLADTYLSHYGHLL 289
           DVV ID+L+LPIN+TTN GIN DHGHFNTTTEI LGKWLA+TYLSH+G LL
Sbjct: 181 DVVAIDSLKLPINYTTNEGINLDHGHFNTTTEITLGKWLAETYLSHFGQLL 231

The following BLAST results are available for this feature:

BLAST of Lsi05G010980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CAES_ARATH	1.0e-47	38.29	Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE...	[more]

BLAST of Lsi05G010980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNC5_CUCSA	2.7e-135	81.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356040 PE=4 SV=1	[more]
E5GB85_CUCME	1.8e-107	65.63	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KAL7_CUCSA	4.3e-93	86.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G135410 PE=4 SV=1	[more]
A0A0A0LKQ6_CUCSA	3.1e-67	63.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356050 PE=4 SV=1	[more]
A0A0A0K9J9_CUCSA	1.8e-59	45.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G058180 PE=4 SV=1	[more]

BLAST of Lsi05G010980 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34215.1	5.8e-49	38.29	Domain of unknown function (DUF303)	[more]
AT3G53010.1	1.7e-48	42.47	Domain of unknown function (DUF303)	[more]

BLAST of Lsi05G010980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778671052\|ref\|XP_011649575.1\|	3.8e-135	81.25	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus]	[more]
gi\|659133975\|ref\|XP_008466975.1\|	1.1e-126	84.92	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]	[more]
gi\|778722113\|ref\|XP_011658406.1\|	8.0e-125	84.52	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus]	[more]
gi\|659087703\|ref\|XP_008444593.1\|	2.7e-117	70.83	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]	[more]
gi\|778730862\|ref\|XP_011659870.1\|	4.2e-110	82.25	PREDICTED: probable carbohydrate esterase At4g34215, partial [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005181	SASA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010980.1	Lsi05G010980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005181	Sialate O-acetylesterase domain	PFAM	PF03629	SASA	coord: 160..243 score: 6.
None	No IPR available	PANTHER	PTHR31988	FAMILY NOT NAMED	coord: 26..282 score: 6.2
None	No IPR available	PANTHER	PTHR31988:SF4	SUBFAMILY NOT NAMED	coord: 26..282 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G010980	Cla002734	Watermelon (97103) v1	lsiwmB357
Lsi05G010980	ClCG07G001770	Watermelon (Charleston Gray)	lsiwcgB348
Lsi05G010980	MELO3C030490.2	Melon (DHL92) v3.6.1	lsimedB372
Lsi05G010980	Cla97C07G130010	Watermelon (97103) v2	lsiwmbB346

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G010980	Silver-seed gourd	carlsiB066
Lsi05G010980	Silver-seed gourd	carlsiB717
Lsi05G010980	Silver-seed gourd	carlsiB879
Lsi05G010980	Cucumber (Chinese Long) v3	cuclsiB219
Lsi05G010980	Cucumber (Chinese Long) v3	cuclsiB234
Lsi05G010980	Cucumber (Chinese Long) v3	cuclsiB560
Lsi05G010980	Watermelon (97103) v2	lsiwmbB335
Lsi05G010980	Watermelon (97103) v2	lsiwmbB355
Lsi05G010980	Wax gourd	lsiwgoB428
Lsi05G010980	Wax gourd	lsiwgoB459
Lsi05G010980	Bottle gourd (USVL1VR-Ls)	lsilsiB017
Lsi05G010980	Bottle gourd (USVL1VR-Ls)	lsilsiB106
Lsi05G010980	Bottle gourd (USVL1VR-Ls)	lsilsiB156
Lsi05G010980	Cucumber (Gy14) v1	cgylsiB082
Lsi05G010980	Cucumber (Gy14) v1	cgylsiB225
Lsi05G010980	Cucumber (Gy14) v1	cgylsiB417
Lsi05G010980	Cucurbita maxima (Rimu)	cmalsiB247
Lsi05G010980	Cucurbita maxima (Rimu)	cmalsiB486
Lsi05G010980	Cucurbita maxima (Rimu)	cmalsiB585
Lsi05G010980	Cucurbita maxima (Rimu)	cmalsiB769
Lsi05G010980	Cucurbita maxima (Rimu)	cmalsiB837
Lsi05G010980	Cucurbita moschata (Rifu)	cmolsiB235
Lsi05G010980	Cucurbita moschata (Rifu)	cmolsiB470
Lsi05G010980	Cucurbita moschata (Rifu)	cmolsiB565
Lsi05G010980	Cucurbita moschata (Rifu)	cmolsiB761
Lsi05G010980	Cucurbita moschata (Rifu)	cmolsiB821
Lsi05G010980	Cucurbita pepo (Zucchini)	cpelsiB209
Lsi05G010980	Cucurbita pepo (Zucchini)	cpelsiB270
Lsi05G010980	Cucurbita pepo (Zucchini)	cpelsiB616
Lsi05G010980	Cucurbita pepo (Zucchini)	cpelsiB716
Lsi05G010980	Wild cucumber (PI 183967)	cpilsiB199
Lsi05G010980	Wild cucumber (PI 183967)	cpilsiB213
Lsi05G010980	Cucumber (Chinese Long) v2	culsiB200
Lsi05G010980	Cucumber (Chinese Long) v2	culsiB215
Lsi05G010980	Cucumber (Chinese Long) v2	culsiB526
Lsi05G010980	Melon (DHL92) v3.5.1	lsimeB356
Lsi05G010980	Melon (DHL92) v3.5.1	lsimeB382
Lsi05G010980	Watermelon (Charleston Gray)	lsiwcgB317
Lsi05G010980	Watermelon (Charleston Gray)	lsiwcgB337
Lsi05G010980	Watermelon (97103) v1	lsiwmB367
Lsi05G010980	Cucumber (Gy14) v2	cgyblsiB185
Lsi05G010980	Cucumber (Gy14) v2	cgyblsiB204
Lsi05G010980	Cucumber (Gy14) v2	cgyblsiB494
Lsi05G010980	Melon (DHL92) v3.6.1	lsimedB398