Lsi05G010800.1 (mRNA) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G010800.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPlant self-incompatibility protein S1 family
Locationchr05 : 18385227 .. 18389721 (-)
Sequence length309
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTAATTTAAAGTTTACTTTTTTATTTTTTAGTACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTCATGTCAGTTACATGCATCTCTTTAATTTATCGGTTAAAATATCAATAAGTTTCCTTAATTATCGAAAGAAAACCTAAGTTATTAATATTCATCAATAATGGTATGTGTGGTTAGATCTTTCCATATACAAACTTCATATATTAATTGTATATAAATGGTTCATATATATATCTCAAAGATTTGAATGAAACATACACAAAATTCTTAGCCAAATCCAAAAATGAAGGCTTTGAATAGTTTGTTTGTGGTTTTGGTGTTTGTAATTTTTGCATTAATTATTAACATTGACACCTGTTTTGCAGCATCCAAATTCATACATCCACTGACGCCAATGAAAGTGACAATTATGAATCACCAAACAAACGATACTCTCTTGGCTCATTGCAAGTCCAAAAATGATGATTTAGGTCAACAATTTTGCTCATTTCTTTTTTTTTTTCTTTCTAATTTTTAGATAATATTTATAATATTTACAATAACCTTTGTTTGTATTTATTCTTTAAATTACATTTTTTTTATTTAATTAAATCTTATTTTGGTGTATTGAATTTTTTTAGTTTGTTTTGTTTTCATCTCTAAATTTTAAGGCTTCTATTTCATAACCATTTGGTTTTTTTATTTTAGGTTTTGAAAATTAAGTTTATGGATACTACATTTACTTATTGGTTTTTGTGTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTGTTTACAATTGAGGATTGTTTTAAAAATACGAGCCTAATTAATAACATTTAAGTCCCGTTTGGTAACCATTTGTTTTTTTTTTTTGTTTTTAGTTTTTTGAAAATTAAGCTTACAAACACCCTTTCCACCTCTAAATTCCTTGTTTTCTTATCTACTTTGTTACCCATGGTTACTAAGTCAAATTTTGAAAATTTAGAAAAGTAGTTTTTAAAAACTTATATTTGTTTTTTAAATTTGGGCTAAGAATTCAACTCTCTTACTCAAGAAAGATGCAAACCATTGTAAGAAAATGTAAAGAATTAAGCTTAATTTTAAAAAACCGAAAACCAAAAACTAGAAACAAAATGGTTACCAAACGGGATCTTAGTTTTTTGTTTTTGGTTTTTAAAAATTGTGCTTGTTTTCCAACAATTTCTCTATCTTGGTTTCGTCTTGCTAAGGTAAGCATTAGAATTTTATGCCAAATTCTAAAAACAAAAATATCCTTTATAAAAACTAGGTTTTTTTTTCACAAAGATGAGCCCAATAGATAGAAGTAGTGTTTGTTGGCTTAATTTTTCCAAAAAAAATTAATTTTTTATCAAACGGATATTTTAATGGGAAATTTTTAAAAATAGAAAAATAAAGAAAACTATTTACACAAAATAGCAAAATTTTAGATAGTTGTGATAGATGCTAATATAAATCTATCAGGGTCTATTTGTAACAACCCAAAATTTTAAGTAATTTTAATTTAATTATCTTAAATTATTTGGGTATTATTTTGAATTTTTAAGTCTTAATTGAATTATTTTAGAAGAAATAATTCAATTTAAATTAAATAGGATAAAAGATTTGAATTTAAATTCCATCGGTGAAAATTGAATTTTAATTTGGGAGATTTAATTTATTTAGTTGAATTGGTGGAGGGAAAAGTAATTTAATATGTATATACCTAATTTATTAAGGAATTAGGGTTTGGGATCGTATATATATATTATTAAGTGACTAGAGAGGGAGAAAAATACACCGAAAAATGGAGAATGGGAAAAACGGCAGTGCAGTTCGGTTTTTCTGCGACAGCTCCTAGAAAATTTTCGTTTTTTGGAGTTTCAACCGTCGGATTGTATTCAAATTTTATCAGCATATTCGGGACATATAGAGCCTCATTCTGAACGGTTGGATAGTTGTTTTAAGCTCTCATGTGTCCGTAATCATTGCCGAACAGAACCTGTAAAACTGGGTAAGTTTTGGGATTTTGGTCTCCATTGGTTATTTGATTTACTATCAAAAAATTTGGTTAATCTCTAATGTTGATCTTGTGTTAGGTTTGAGGTTTCTAAAGTTTTGGTTACGCTTAACAAGCCTTGGCGTCAACGTATTATTATTTTTTTTTTTTGTGGATTTTAGGCAACAACCGTTGTGGGTCATAACGGTGGTGTGGATTGTAATTGGTACACAGGGAATTTCTGAGCGCGATTGTTACACTTATTTCAAGGTAAGTGATTCTACTGCTGGCAGGTCTTGACCATTGGCATATAAATCATTCAGAGTATTATTTGGCTATTGGCTGGCTATTGGCATGTTTGCATGTATGATTTGTCTGGCTAATGCTTCTCTGGCTACTTTATGATTTATCTACTGTTGAGAATTTATCAGTTGAGAATTTACCTATGCTATGTATGATTGAATCCGATGCCAACGCCCGTTGTCCCATGCTATATTATTACTTGAATCATTAAGTTCACCTCAAAACAGTTTTGACGGTGTGCCATCAGGCCACTAGACCTGTGTGGACCGACGGGTTCTCATCAGGTTCACCTCCAGTTTCGACGGTGTGCCATCAGGCCACTAGACATGTGTGGACCGACGGGTTCACCTCCATGTTCACTGGTGTGGATCATCAGGCTTACACCACAGCATTGACAGCGTGCCCTCAAGCCGTTAAGCATGGTGACAGGGCAGTTGGCCTACAGATCTAGAAATCCCGGCAGTGGGATTACTTACTAAGTTTTATACTCATTCGGTTACAATTTTATAGATTTCAGGTAAAGACAAGGACAGACAGACGAATGACAGGAAGAATCCGTGACCGTGCCATTGGGACCAGTCAATGCTTCCGCTCATATTTTTATGTTTTCATGTTGTTAAATCCAAATTTGAATGTTTAAATTAGAAATTTTAGTTTTGCATTCTTAGAGGTTTTATGCAAAACTCACAGTTCTGGTTTTATAATTTTTTTTAGGGGTACCCCGATCTAATATTTTTAATTATTTAAATTTAATGAAGTTATTTATTTGATAAATTTCTTTTATTTTAGTCAAATATACGAAATGTGTCGTTTTGAAATGTATGCATGCATGAAGTAACGACTTCTAGAAAGTCAGGTCGTTACACTATTAGTGATAGAAATTATAGAAGTCTATCACTGATAGATGTTGATAGAAGTCTATCAATATCTATCAATATTTTTTTGCTATTTTCTGTAAATAGTTTGATATTTTTTTCTGTGTAAAAATTTCCCTATTTTAATATTGCCCTATTTAGTGCTCATAATGGCTTGAAATTTTACTCATATATTAATGTGCTCGTTCACATACTCAAATGAGCTTGGTCATTCATTTGTTAAAATAAAAATAAATGTATGACAACAAAGATTTTTTTTTAAGGATTAGAAAAAATAGACATATTTTAAAACTAACCTTAAACTAAATAATATGTGATTTGAACATTTTCTTAATTGAATTTGAGTACGTGTGTGAAAAAATAATTATGGATCCACCATTGATTTCAGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG

mRNA sequence

ATGGATACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG

Coding sequence (CDS)

ATGGATACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG

Protein sequence

MDTTNTMDDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESGTS
Homology
[Close]
BLAST of Lsi05G010800.1 vs. TrEMBL
Match: A0A0A0KA40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-17
Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1 

Query: 8   DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDH 67
           DDD    G  VI N G+ Y W F+ N+  TT +WC+F+++  HA+FEVFWPE   W SD 
Sbjct: 59  DDDL---GVHVIQNEGEHYSWGFKENWLQTTKYWCDFQSKLGHASFEVFWPERGTWFSDR 118

Query: 68  C-TDSNCIWVAKNEGFYLFNGSQKKFEFVHAW 98
           C ++SNC+WVA ++GF L N   K  EF H W
Sbjct: 119 CGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]
BLAST of Lsi05G010800.1 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-16
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAE-AWLSDH 67
           DDD    GE+ +  G  + W F+ NFFGTTL+WC    +QKHA  +VFW E + +WL   
Sbjct: 41  DDDL---GERNLAPGTEFNWSFKENFFGTTLYWCYMSTDQKHAALDVFWVEGDHSWLQYR 100

Query: 68  CTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE 99
           C   +CIW+AK++G Y+    + + EF H WE
Sbjct: 101 CNWKDCIWIAKDDGIYIKIIPENRDEFSHKWE 129

[Close]
BLAST of Lsi05G010800.1 vs. TrEMBL
Match: M5VN50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-15
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 1 

Query: 22  GKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAE---AWLSDHCTDSNCIWVAKN 81
           G  + W F+ NF GTTLFWCN  N  +HA F+VFW E E   +WL   C    C WVAK+
Sbjct: 26  GNEFNWGFKENFGGTTLFWCNIHNNHQHANFQVFWHEDESKSSWLHYRCNWKECFWVAKD 85

Query: 82  EGFYLFNGSQKKFEFVHAWESG 101
           +G Y+ N  + + E  H WE G
Sbjct: 86  DGIYIRNTPEGRDELQHQWEPG 107

[Close]
BLAST of Lsi05G010800.1 vs. TrEMBL
Match: A0A061DVJ1_THECC (S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.5e-11
Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 1 

Query: 12  NFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSN 71
           N  G   +  G  + WKF+    G TLFWC       HA+F+VFW + +  L   C   N
Sbjct: 66  NDLGIHNLTAGTEFNWKFKPQILGKTLFWCYMAWGNVHASFKVFWDDND--LFYRCNWKN 125

Query: 72  CIWVAKNEGFYLFNGSQKKFEFVHAWESG 101
           CIW AK++G YL N  +   EF H WE G
Sbjct: 126 CIWTAKDDGVYLKNIPENYDEFRHKWEPG 152

[Close]
BLAST of Lsi05G010800.1 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.2e-11
Identity = 39/92 (42.39%), Postives = 48/92 (52.17%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHAT-FEVFWPEAEAWLSDH 67
           DDD    GE  +  G  + WKF+ NFF TTLFWC  + + K    F VFW   E +    
Sbjct: 57  DDDL---GEHNLAAGTEFAWKFKENFFQTTLFWCYLKKQDKFCNIFNVFW--KEDFFQFR 116

Query: 68  CTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE 99
           C   NCIW+AK EG YL N  +   E  H W+
Sbjct: 117 CRYKNCIWIAKVEGIYLKNIPEGHDELWHEWK 143

[Close]
BLAST of Lsi05G010800.1 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.5 bits (153), Expect = 8.4e-11
Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 1 

Query: 25  YEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLF 84
           + W F  N   +TLFWC    +  H   +VFW +    L   C   NC+W AKN+G YL+
Sbjct: 77  FSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDDVI--LFHRCDWKNCVWTAKNDGLYLW 136

Query: 85  NGSQKKFEFVHAWESG 101
           N +  +      W+SG
Sbjct: 137 NSAIGEDVLSEKWKSG 150

[Close]
BLAST of Lsi05G010800.1 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 61.2 bits (147), Expect = 4.2e-10
Identity = 28/86 (32.56%), Postives = 37/86 (43.02%), Query Frame = 1 

Query: 15  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIW 74
           GE  +     + W F  N   +T FWC    +  H    VFW   +  L   C   NCIW
Sbjct: 67  GEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWD--DVILFHRCGWKNCIW 126

Query: 75  VAKNEGFYLFNGSQKKFEFVHAWESG 101
            AK +G YL+N +  +      WE G
Sbjct: 127 TAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]
BLAST of Lsi05G010800.1 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 53.5 bits (127), Expect = 8.7e-08
Identity = 23/90 (25.56%), Postives = 44/90 (48.89%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHC 67
           DDD    G + +  G+ + + F   FFG TL++C+F    +  +F+++    ++   + C
Sbjct: 70  DDDL---GNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSGGDNKC 129

Query: 68  TDSNCIWVAKNEGFYLFNGSQKKFEFVHAW 98
               C+W  +  G   FN   K+F+  + W
Sbjct: 130 ESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]
BLAST of Lsi05G010800.1 vs. TAIR10
Match: AT1G28305.1 (AT1G28305.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 51.6 bits (122), Expect = 3.3e-07
Identity = 26/84 (30.95%), Postives = 41/84 (48.81%), Query Frame = 1 

Query: 15  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIW 74
           G+  +  GK+Y++  R NF+ TTLFWC FR+   + T + F  +   +           W
Sbjct: 53  GKHYVKYGKIYQFDIRDNFWKTTLFWCTFRHGPDYRTGQQF--DVYEYKPGVAQGGTYEW 112

Query: 75  VAKNEGFYLFNGSQKKFEFVHAWE 99
            A+ +G Y F  +Q     VH W+
Sbjct: 113 TAREDGIY-FRLNQGTIHKVHNWK 133

[Close]
BLAST of Lsi05G010800.1 vs. NCBI nr
Match: gi|659093660|ref|XP_008447647.1| (PREDICTED: uncharacterized protein LOC103490054 [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-31
Identity = 61/94 (64.89%), Postives = 74/94 (78.72%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPE--AEAWLSD 67
           DDD    GE +I++GK YEWKFR NF GTTLFWCNFRN+ KHATFEVFW E  +++WL D
Sbjct: 22  DDDL---GEHIIDMGKEYEWKFRENFSGTTLFWCNFRNKHKHATFEVFWRESRSKSWLED 81

Query: 68  HCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWES 100
           HC DSNC+W  K+ GFYL++ SQ KFEF+H W+S
Sbjct: 82  HCKDSNCLWTVKSTGFYLYDSSQNKFEFIHEWKS 112

[Close]
BLAST of Lsi05G010800.1 vs. NCBI nr
Match: gi|659117571|ref|XP_008458671.1| (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21
Identity = 50/91 (54.95%), Postives = 60/91 (65.93%), Query Frame = 1 

Query: 8   DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDH 67
           DDD    G  VI N G+ Y W F+ N+  TT FWCNF++   HA+FEVFWPE   WLSD 
Sbjct: 59  DDDL---GVHVIQNEGERYSWGFKENWLQTTKFWCNFQSRLGHASFEVFWPETGTWLSDR 118

Query: 68  CTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW 98
           C++SNC+WVA N+GF L NG  K  EF H W
Sbjct: 119 CSNSNCVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]
BLAST of Lsi05G010800.1 vs. NCBI nr
Match: gi|659125766|ref|XP_008462850.1| (PREDICTED: uncharacterized protein LOC103501130 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-19
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHC 67
           DDD    G Q+I+I   Y W F+ NF+ TTLFWC+F +   HA+F+VFWPE   WL   C
Sbjct: 60  DDDL---GAQIIDINGQYSWTFKENFWQTTLFWCDFSSLNGHASFQVFWPEKGDWLEYRC 119

Query: 68  TDSNCIWVAKNEGFYLFNGSQKKFEFVHAWES 100
              NC W A N+GF+L N  + +FE +H W++
Sbjct: 120 DHGNCTWAATNDGFFLANIPEGRFELMHYWQN 148

[Close]
BLAST of Lsi05G010800.1 vs. NCBI nr
Match: gi|1009148884|ref|XP_015892178.1| (PREDICTED: uncharacterized protein LOC107426491 [Ziziphus jujuba])

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-18
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHC 67
           DDD    GE  + +G+ + W F+ NFFGTTL+WC+   + +HA F V+W   + WL D C
Sbjct: 58  DDDL---GEHNLAVGQEFSWSFKFNFFGTTLYWCDTHTDHQHAAFNVYW--HKQWLEDRC 117

Query: 68  TDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG 101
            + +CIW AK++GFYL N  + + E +H WE G
Sbjct: 118 DERSCIWTAKDDGFYLKNIPENRDELIHKWEEG 145

[Close]
BLAST of Lsi05G010800.1 vs. NCBI nr
Match: gi|1009148882|ref|XP_015892177.1| (PREDICTED: uncharacterized protein LOC107426490 [Ziziphus jujuba])

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17
Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHC 67
           DDD    GE  + +G+ + W FR NFF TTL+WC    + +HA F V+W   + WL D C
Sbjct: 58  DDDL---GEHNLAVGQEFSWSFRFNFFETTLYWCYTHTDHQHAAFNVYW--HKKWLEDRC 117

Query: 68  TDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG 101
            + +CIW AK++GFYL N  + + E +H WE G
Sbjct: 118 DERSCIWTAKDDGFYLKNIPENRDELIHKWEEG 145

The following BLAST results are available for this feature:
BLAST of Lsi05G010800.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi05G010800.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA40_CUCSA1.0e-1748.91Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1[more]
M5VWE5_PRUPE5.7e-1643.48Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S... [more]
M5VN50_PRUPE1.3e-1546.34Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1[more]
A0A061DVJ1_THECC5.5e-1140.45S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1[more]
V4TTV3_9ROSI7.2e-1142.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1[more]
BLAST of Lsi05G010800.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29035.18.4e-1135.53 Plant self-incompatibility protein S1 family[more]
AT4G16295.14.2e-1032.56 S-protein homologue 1[more]
AT4G16195.18.7e-0825.56 Plant self-incompatibility protein S1 family[more]
AT1G28305.13.3e-0730.95 Plant self-incompatibility protein S1 family[more]
BLAST of Lsi05G010800.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093660|ref|XP_008447647.1|1.8e-3164.89PREDICTED: uncharacterized protein LOC103490054 [Cucumis melo][more]
gi|659117571|ref|XP_008458671.1|1.0e-2154.95PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo][more]
gi|659125766|ref|XP_008462850.1|4.6e-1946.74PREDICTED: uncharacterized protein LOC103501130 [Cucumis melo][more]
gi|1009148884|ref|XP_015892178.1|1.4e-1844.09PREDICTED: uncharacterized protein LOC107426491 [Ziziphus jujuba][more]
gi|1009148882|ref|XP_015892177.1|1.1e-1744.09PREDICTED: uncharacterized protein LOC107426490 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi05G010800Lsi05G010800gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi05G010800.1.CDS.3Lsi05G010800.1.CDS.3CDS
Lsi05G010800.1.CDS.2Lsi05G010800.1.CDS.2CDS
Lsi05G010800.1.CDS.1Lsi05G010800.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi05G010800.1Lsi05G010800.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 14..97
score: 7.9
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 15..102
score: 8.8
NoneNo IPR availablePANTHERPTHR31232:SF2GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATEDcoord: 15..102
score: 8.8