Lsi05G010800 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G010800
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPlant self-incompatibility protein S1 family
Locationchr05 : 18385227 .. 18389721 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTAATTTAAAGTTTACTTTTTTATTTTTTAGTACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTCATGTCAGTTACATGCATCTCTTTAATTTATCGGTTAAAATATCAATAAGTTTCCTTAATTATCGAAAGAAAACCTAAGTTATTAATATTCATCAATAATGGTATGTGTGGTTAGATCTTTCCATATACAAACTTCATATATTAATTGTATATAAATGGTTCATATATATATCTCAAAGATTTGAATGAAACATACACAAAATTCTTAGCCAAATCCAAAAATGAAGGCTTTGAATAGTTTGTTTGTGGTTTTGGTGTTTGTAATTTTTGCATTAATTATTAACATTGACACCTGTTTTGCAGCATCCAAATTCATACATCCACTGACGCCAATGAAAGTGACAATTATGAATCACCAAACAAACGATACTCTCTTGGCTCATTGCAAGTCCAAAAATGATGATTTAGGTCAACAATTTTGCTCATTTCTTTTTTTTTTTCTTTCTAATTTTTAGATAATATTTATAATATTTACAATAACCTTTGTTTGTATTTATTCTTTAAATTACATTTTTTTTATTTAATTAAATCTTATTTTGGTGTATTGAATTTTTTTAGTTTGTTTTGTTTTCATCTCTAAATTTTAAGGCTTCTATTTCATAACCATTTGGTTTTTTTATTTTAGGTTTTGAAAATTAAGTTTATGGATACTACATTTACTTATTGGTTTTTGTGTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTGTTTACAATTGAGGATTGTTTTAAAAATACGAGCCTAATTAATAACATTTAAGTCCCGTTTGGTAACCATTTGTTTTTTTTTTTTGTTTTTAGTTTTTTGAAAATTAAGCTTACAAACACCCTTTCCACCTCTAAATTCCTTGTTTTCTTATCTACTTTGTTACCCATGGTTACTAAGTCAAATTTTGAAAATTTAGAAAAGTAGTTTTTAAAAACTTATATTTGTTTTTTAAATTTGGGCTAAGAATTCAACTCTCTTACTCAAGAAAGATGCAAACCATTGTAAGAAAATGTAAAGAATTAAGCTTAATTTTAAAAAACCGAAAACCAAAAACTAGAAACAAAATGGTTACCAAACGGGATCTTAGTTTTTTGTTTTTGGTTTTTAAAAATTGTGCTTGTTTTCCAACAATTTCTCTATCTTGGTTTCGTCTTGCTAAGGTAAGCATTAGAATTTTATGCCAAATTCTAAAAACAAAAATATCCTTTATAAAAACTAGGTTTTTTTTTCACAAAGATGAGCCCAATAGATAGAAGTAGTGTTTGTTGGCTTAATTTTTCCAAAAAAAATTAATTTTTTATCAAACGGATATTTTAATGGGAAATTTTTAAAAATAGAAAAATAAAGAAAACTATTTACACAAAATAGCAAAATTTTAGATAGTTGTGATAGATGCTAATATAAATCTATCAGGGTCTATTTGTAACAACCCAAAATTTTAAGTAATTTTAATTTAATTATCTTAAATTATTTGGGTATTATTTTGAATTTTTAAGTCTTAATTGAATTATTTTAGAAGAAATAATTCAATTTAAATTAAATAGGATAAAAGATTTGAATTTAAATTCCATCGGTGAAAATTGAATTTTAATTTGGGAGATTTAATTTATTTAGTTGAATTGGTGGAGGGAAAAGTAATTTAATATGTATATACCTAATTTATTAAGGAATTAGGGTTTGGGATCGTATATATATATTATTAAGTGACTAGAGAGGGAGAAAAATACACCGAAAAATGGAGAATGGGAAAAACGGCAGTGCAGTTCGGTTTTTCTGCGACAGCTCCTAGAAAATTTTCGTTTTTTGGAGTTTCAACCGTCGGATTGTATTCAAATTTTATCAGCATATTCGGGACATATAGAGCCTCATTCTGAACGGTTGGATAGTTGTTTTAAGCTCTCATGTGTCCGTAATCATTGCCGAACAGAACCTGTAAAACTGGGTAAGTTTTGGGATTTTGGTCTCCATTGGTTATTTGATTTACTATCAAAAAATTTGGTTAATCTCTAATGTTGATCTTGTGTTAGGTTTGAGGTTTCTAAAGTTTTGGTTACGCTTAACAAGCCTTGGCGTCAACGTATTATTATTTTTTTTTTTTGTGGATTTTAGGCAACAACCGTTGTGGGTCATAACGGTGGTGTGGATTGTAATTGGTACACAGGGAATTTCTGAGCGCGATTGTTACACTTATTTCAAGGTAAGTGATTCTACTGCTGGCAGGTCTTGACCATTGGCATATAAATCATTCAGAGTATTATTTGGCTATTGGCTGGCTATTGGCATGTTTGCATGTATGATTTGTCTGGCTAATGCTTCTCTGGCTACTTTATGATTTATCTACTGTTGAGAATTTATCAGTTGAGAATTTACCTATGCTATGTATGATTGAATCCGATGCCAACGCCCGTTGTCCCATGCTATATTATTACTTGAATCATTAAGTTCACCTCAAAACAGTTTTGACGGTGTGCCATCAGGCCACTAGACCTGTGTGGACCGACGGGTTCTCATCAGGTTCACCTCCAGTTTCGACGGTGTGCCATCAGGCCACTAGACATGTGTGGACCGACGGGTTCACCTCCATGTTCACTGGTGTGGATCATCAGGCTTACACCACAGCATTGACAGCGTGCCCTCAAGCCGTTAAGCATGGTGACAGGGCAGTTGGCCTACAGATCTAGAAATCCCGGCAGTGGGATTACTTACTAAGTTTTATACTCATTCGGTTACAATTTTATAGATTTCAGGTAAAGACAAGGACAGACAGACGAATGACAGGAAGAATCCGTGACCGTGCCATTGGGACCAGTCAATGCTTCCGCTCATATTTTTATGTTTTCATGTTGTTAAATCCAAATTTGAATGTTTAAATTAGAAATTTTAGTTTTGCATTCTTAGAGGTTTTATGCAAAACTCACAGTTCTGGTTTTATAATTTTTTTTAGGGGTACCCCGATCTAATATTTTTAATTATTTAAATTTAATGAAGTTATTTATTTGATAAATTTCTTTTATTTTAGTCAAATATACGAAATGTGTCGTTTTGAAATGTATGCATGCATGAAGTAACGACTTCTAGAAAGTCAGGTCGTTACACTATTAGTGATAGAAATTATAGAAGTCTATCACTGATAGATGTTGATAGAAGTCTATCAATATCTATCAATATTTTTTTGCTATTTTCTGTAAATAGTTTGATATTTTTTTCTGTGTAAAAATTTCCCTATTTTAATATTGCCCTATTTAGTGCTCATAATGGCTTGAAATTTTACTCATATATTAATGTGCTCGTTCACATACTCAAATGAGCTTGGTCATTCATTTGTTAAAATAAAAATAAATGTATGACAACAAAGATTTTTTTTTAAGGATTAGAAAAAATAGACATATTTTAAAACTAACCTTAAACTAAATAATATGTGATTTGAACATTTTCTTAATTGAATTTGAGTACGTGTGTGAAAAAATAATTATGGATCCACCATTGATTTCAGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG

mRNA sequence

ATGGATACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG

Coding sequence (CDS)

ATGGATACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG

Protein sequence

MDTTNTMDDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESGTS
Homology
[Close]
BLAST of Lsi05G010800 vs. TrEMBL
Match: A0A0A0KA40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-17
Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1 

Query: 8   DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDH 67
           DDD    G  VI N G+ Y W F+ N+  TT +WC+F+++  HA+FEVFWPE   W SD 
Sbjct: 59  DDDL---GVHVIQNEGEHYSWGFKENWLQTTKYWCDFQSKLGHASFEVFWPERGTWFSDR 118

Query: 68  C-TDSNCIWVAKNEGFYLFNGSQKKFEFVHAW 98
           C ++SNC+WVA ++GF L N   K  EF H W
Sbjct: 119 CGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]
BLAST of Lsi05G010800 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-16
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAE-AWLSDH 67
           DDD    GE+ +  G  + W F+ NFFGTTL+WC    +QKHA  +VFW E + +WL   
Sbjct: 41  DDDL---GERNLAPGTEFNWSFKENFFGTTLYWCYMSTDQKHAALDVFWVEGDHSWLQYR 100

Query: 68  CTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE 99
           C   +CIW+AK++G Y+    + + EF H WE
Sbjct: 101 CNWKDCIWIAKDDGIYIKIIPENRDEFSHKWE 129

[Close]
BLAST of Lsi05G010800 vs. TrEMBL
Match: M5VN50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-15
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 1 

Query: 22  GKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAE---AWLSDHCTDSNCIWVAKN 81
           G  + W F+ NF GTTLFWCN  N  +HA F+VFW E E   +WL   C    C WVAK+
Sbjct: 26  GNEFNWGFKENFGGTTLFWCNIHNNHQHANFQVFWHEDESKSSWLHYRCNWKECFWVAKD 85

Query: 82  EGFYLFNGSQKKFEFVHAWESG 101
           +G Y+ N  + + E  H WE G
Sbjct: 86  DGIYIRNTPEGRDELQHQWEPG 107

[Close]
BLAST of Lsi05G010800 vs. TrEMBL
Match: A0A061DVJ1_THECC (S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.5e-11
Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 1 

Query: 12  NFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSN 71
           N  G   +  G  + WKF+    G TLFWC       HA+F+VFW + +  L   C   N
Sbjct: 66  NDLGIHNLTAGTEFNWKFKPQILGKTLFWCYMAWGNVHASFKVFWDDND--LFYRCNWKN 125

Query: 72  CIWVAKNEGFYLFNGSQKKFEFVHAWESG 101
           CIW AK++G YL N  +   EF H WE G
Sbjct: 126 CIWTAKDDGVYLKNIPENYDEFRHKWEPG 152

[Close]
BLAST of Lsi05G010800 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.2e-11
Identity = 39/92 (42.39%), Postives = 48/92 (52.17%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHAT-FEVFWPEAEAWLSDH 67
           DDD    GE  +  G  + WKF+ NFF TTLFWC  + + K    F VFW   E +    
Sbjct: 57  DDDL---GEHNLAAGTEFAWKFKENFFQTTLFWCYLKKQDKFCNIFNVFW--KEDFFQFR 116

Query: 68  CTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE 99
           C   NCIW+AK EG YL N  +   E  H W+
Sbjct: 117 CRYKNCIWIAKVEGIYLKNIPEGHDELWHEWK 143

[Close]
BLAST of Lsi05G010800 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.5 bits (153), Expect = 8.4e-11
Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 1 

Query: 25  YEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLF 84
           + W F  N   +TLFWC    +  H   +VFW +    L   C   NC+W AKN+G YL+
Sbjct: 77  FSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDDVI--LFHRCDWKNCVWTAKNDGLYLW 136

Query: 85  NGSQKKFEFVHAWESG 101
           N +  +      W+SG
Sbjct: 137 NSAIGEDVLSEKWKSG 150

[Close]
BLAST of Lsi05G010800 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 61.2 bits (147), Expect = 4.2e-10
Identity = 28/86 (32.56%), Postives = 37/86 (43.02%), Query Frame = 1 

Query: 15  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIW 74
           GE  +     + W F  N   +T FWC    +  H    VFW   +  L   C   NCIW
Sbjct: 67  GEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWD--DVILFHRCGWKNCIW 126

Query: 75  VAKNEGFYLFNGSQKKFEFVHAWESG 101
            AK +G YL+N +  +      WE G
Sbjct: 127 TAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]
BLAST of Lsi05G010800 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 53.5 bits (127), Expect = 8.7e-08
Identity = 23/90 (25.56%), Postives = 44/90 (48.89%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHC 67
           DDD    G + +  G+ + + F   FFG TL++C+F    +  +F+++    ++   + C
Sbjct: 70  DDDL---GNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSGGDNKC 129

Query: 68  TDSNCIWVAKNEGFYLFNGSQKKFEFVHAW 98
               C+W  +  G   FN   K+F+  + W
Sbjct: 130 ESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]
BLAST of Lsi05G010800 vs. TAIR10
Match: AT1G28305.1 (AT1G28305.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 51.6 bits (122), Expect = 3.3e-07
Identity = 26/84 (30.95%), Postives = 41/84 (48.81%), Query Frame = 1 

Query: 15  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIW 74
           G+  +  GK+Y++  R NF+ TTLFWC FR+   + T + F  +   +           W
Sbjct: 53  GKHYVKYGKIYQFDIRDNFWKTTLFWCTFRHGPDYRTGQQF--DVYEYKPGVAQGGTYEW 112

Query: 75  VAKNEGFYLFNGSQKKFEFVHAWE 99
            A+ +G Y F  +Q     VH W+
Sbjct: 113 TAREDGIY-FRLNQGTIHKVHNWK 133

[Close]
BLAST of Lsi05G010800 vs. NCBI nr
Match: gi|659093660|ref|XP_008447647.1| (PREDICTED: uncharacterized protein LOC103490054 [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-31
Identity = 61/94 (64.89%), Postives = 74/94 (78.72%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPE--AEAWLSD 67
           DDD    GE +I++GK YEWKFR NF GTTLFWCNFRN+ KHATFEVFW E  +++WL D
Sbjct: 22  DDDL---GEHIIDMGKEYEWKFRENFSGTTLFWCNFRNKHKHATFEVFWRESRSKSWLED 81

Query: 68  HCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWES 100
           HC DSNC+W  K+ GFYL++ SQ KFEF+H W+S
Sbjct: 82  HCKDSNCLWTVKSTGFYLYDSSQNKFEFIHEWKS 112

[Close]
BLAST of Lsi05G010800 vs. NCBI nr
Match: gi|659117571|ref|XP_008458671.1| (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21
Identity = 50/91 (54.95%), Postives = 60/91 (65.93%), Query Frame = 1 

Query: 8   DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDH 67
           DDD    G  VI N G+ Y W F+ N+  TT FWCNF++   HA+FEVFWPE   WLSD 
Sbjct: 59  DDDL---GVHVIQNEGERYSWGFKENWLQTTKFWCNFQSRLGHASFEVFWPETGTWLSDR 118

Query: 68  CTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW 98
           C++SNC+WVA N+GF L NG  K  EF H W
Sbjct: 119 CSNSNCVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]
BLAST of Lsi05G010800 vs. NCBI nr
Match: gi|659125766|ref|XP_008462850.1| (PREDICTED: uncharacterized protein LOC103501130 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-19
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHC 67
           DDD    G Q+I+I   Y W F+ NF+ TTLFWC+F +   HA+F+VFWPE   WL   C
Sbjct: 60  DDDL---GAQIIDINGQYSWTFKENFWQTTLFWCDFSSLNGHASFQVFWPEKGDWLEYRC 119

Query: 68  TDSNCIWVAKNEGFYLFNGSQKKFEFVHAWES 100
              NC W A N+GF+L N  + +FE +H W++
Sbjct: 120 DHGNCTWAATNDGFFLANIPEGRFELMHYWQN 148

[Close]
BLAST of Lsi05G010800 vs. NCBI nr
Match: gi|1009148884|ref|XP_015892178.1| (PREDICTED: uncharacterized protein LOC107426491 [Ziziphus jujuba])

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-18
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHC 67
           DDD    GE  + +G+ + W F+ NFFGTTL+WC+   + +HA F V+W   + WL D C
Sbjct: 58  DDDL---GEHNLAVGQEFSWSFKFNFFGTTLYWCDTHTDHQHAAFNVYW--HKQWLEDRC 117

Query: 68  TDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG 101
            + +CIW AK++GFYL N  + + E +H WE G
Sbjct: 118 DERSCIWTAKDDGFYLKNIPENRDELIHKWEEG 145

[Close]
BLAST of Lsi05G010800 vs. NCBI nr
Match: gi|1009148882|ref|XP_015892177.1| (PREDICTED: uncharacterized protein LOC107426490 [Ziziphus jujuba])

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17
Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 1 

Query: 8   DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHC 67
           DDD    GE  + +G+ + W FR NFF TTL+WC    + +HA F V+W   + WL D C
Sbjct: 58  DDDL---GEHNLAVGQEFSWSFRFNFFETTLYWCYTHTDHQHAAFNVYW--HKKWLEDRC 117

Query: 68  TDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG 101
            + +CIW AK++GFYL N  + + E +H WE G
Sbjct: 118 DERSCIWTAKDDGFYLKNIPENRDELIHKWEEG 145

The following BLAST results are available for this feature:
BLAST of Lsi05G010800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi05G010800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA40_CUCSA1.0e-1748.91Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1[more]
M5VWE5_PRUPE5.7e-1643.48Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S... [more]
M5VN50_PRUPE1.3e-1546.34Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1[more]
A0A061DVJ1_THECC5.5e-1140.45S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1[more]
V4TTV3_9ROSI7.2e-1142.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1[more]
BLAST of Lsi05G010800 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29035.18.4e-1135.53 Plant self-incompatibility protein S1 family[more]
AT4G16295.14.2e-1032.56 S-protein homologue 1[more]
AT4G16195.18.7e-0825.56 Plant self-incompatibility protein S1 family[more]
AT1G28305.13.3e-0730.95 Plant self-incompatibility protein S1 family[more]
BLAST of Lsi05G010800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093660|ref|XP_008447647.1|1.8e-3164.89PREDICTED: uncharacterized protein LOC103490054 [Cucumis melo][more]
gi|659117571|ref|XP_008458671.1|1.0e-2154.95PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo][more]
gi|659125766|ref|XP_008462850.1|4.6e-1946.74PREDICTED: uncharacterized protein LOC103501130 [Cucumis melo][more]
gi|1009148884|ref|XP_015892178.1|1.4e-1844.09PREDICTED: uncharacterized protein LOC107426491 [Ziziphus jujuba][more]
gi|1009148882|ref|XP_015892177.1|1.1e-1744.09PREDICTED: uncharacterized protein LOC107426490 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G010800.1Lsi05G010800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 14..97
score: 7.9
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 15..102
score: 8.8
NoneNo IPR availablePANTHERPTHR31232:SF2GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATEDcoord: 15..102
score: 8.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G010800Bottle gourd (USVL1VR-Ls)lsilsiB106
Lsi05G010800Bottle gourd (USVL1VR-Ls)lsilsiB156
Lsi05G010800Cucumber (Gy14) v1cgylsiB082
Lsi05G010800Cucumber (Gy14) v1cgylsiB225
Lsi05G010800Cucumber (Gy14) v1cgylsiB417
Lsi05G010800Cucurbita maxima (Rimu)cmalsiB247
Lsi05G010800Cucurbita maxima (Rimu)cmalsiB486
Lsi05G010800Cucurbita maxima (Rimu)cmalsiB585
Lsi05G010800Cucurbita maxima (Rimu)cmalsiB769
Lsi05G010800Cucurbita maxima (Rimu)cmalsiB837
Lsi05G010800Cucurbita moschata (Rifu)cmolsiB235
Lsi05G010800Cucurbita moschata (Rifu)cmolsiB470
Lsi05G010800Cucurbita moschata (Rifu)cmolsiB565
Lsi05G010800Cucurbita moschata (Rifu)cmolsiB761
Lsi05G010800Cucurbita moschata (Rifu)cmolsiB821
Lsi05G010800Cucurbita pepo (Zucchini)cpelsiB209
Lsi05G010800Cucurbita pepo (Zucchini)cpelsiB270
Lsi05G010800Cucurbita pepo (Zucchini)cpelsiB616
Lsi05G010800Cucurbita pepo (Zucchini)cpelsiB716
Lsi05G010800Wild cucumber (PI 183967)cpilsiB199
Lsi05G010800Wild cucumber (PI 183967)cpilsiB213
Lsi05G010800Cucumber (Chinese Long) v2culsiB200
Lsi05G010800Cucumber (Chinese Long) v2culsiB215
Lsi05G010800Cucumber (Chinese Long) v2culsiB526
Lsi05G010800Melon (DHL92) v3.5.1lsimeB356
Lsi05G010800Melon (DHL92) v3.5.1lsimeB382
Lsi05G010800Watermelon (Charleston Gray)lsiwcgB317
Lsi05G010800Watermelon (Charleston Gray)lsiwcgB337
Lsi05G010800Watermelon (Charleston Gray)lsiwcgB348
Lsi05G010800Watermelon (97103) v1lsiwmB357
Lsi05G010800Watermelon (97103) v1lsiwmB367
Lsi05G010800Cucumber (Gy14) v2cgyblsiB185
Lsi05G010800Cucumber (Gy14) v2cgyblsiB204
Lsi05G010800Cucumber (Gy14) v2cgyblsiB494
Lsi05G010800Melon (DHL92) v3.6.1lsimedB398
Lsi05G010800Silver-seed gourdcarlsiB066
Lsi05G010800Silver-seed gourdcarlsiB717
Lsi05G010800Silver-seed gourdcarlsiB879
Lsi05G010800Cucumber (Chinese Long) v3cuclsiB219
Lsi05G010800Cucumber (Chinese Long) v3cuclsiB234
Lsi05G010800Cucumber (Chinese Long) v3cuclsiB560
Lsi05G010800Watermelon (97103) v2lsiwmbB335
Lsi05G010800Watermelon (97103) v2lsiwmbB346
Lsi05G010800Watermelon (97103) v2lsiwmbB355
Lsi05G010800Wax gourdlsiwgoB459