Lsi05G002210.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi05G002210.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 2991341 .. 2991592 (-)
Sequence length252
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCGTCCATGAGATGGCCCCAATTCGAGATGGTCGGAGGGATTGGTCCTCTTTCTCTTGCGGGAAACGGAGAGAAAGGAAAGGGAAGCGGCAAATTCTTGGGAAAAGAGGAAGTGGGTGAAGAGAGGGAAGAGATTGGGATAGAAATTGGAATCGGAAGTGGAATTGGAGAAAAGGGAATGTGGGTTGGAGGAAGGGAAGAGGAGGAAGAGGAGGAGGAGGAGTTGGGAGATCAAAGAAGAGAGTAA

mRNA sequence

ATGAACTCGTCCATGAGATGGCCCCAATTCGAGATGGTCGGAGGGATTGGTCCTCTTTCTCTTGCGGGAAACGGAGAGAAAGGAAAGGGAAGCGGCAAATTCTTGGGAAAAGAGGAAGTGGGTGAAGAGAGGGAAGAGATTGGGATAGAAATTGGAATCGGAAGTGGAATTGGAGAAAAGGGAATGTGGGTTGGAGGAAGGGAAGAGGAGGAAGAGGAGGAGGAGGAGTTGGGAGATCAAAGAAGAGAGTAA

Coding sequence (CDS)

ATGAACTCGTCCATGAGATGGCCCCAATTCGAGATGGTCGGAGGGATTGGTCCTCTTTCTCTTGCGGGAAACGGAGAGAAAGGAAAGGGAAGCGGCAAATTCTTGGGAAAAGAGGAAGTGGGTGAAGAGAGGGAAGAGATTGGGATAGAAATTGGAATCGGAAGTGGAATTGGAGAAAAGGGAATGTGGGTTGGAGGAAGGGAAGAGGAGGAAGAGGAGGAGGAGGAGTTGGGAGATCAAAGAAGAGAGTAA

Protein sequence

MNSSMRWPQFEMVGGIGPLSLAGNGEKGKGSGKFLGKEEVGEEREEIGIEIGIGSGIGEKGMWVGGREEEEEEEEELGDQRRE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
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The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi05G002210Lsi05G002210gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi05G002210.1.CDS.1Lsi05G002210.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi05G002210.1Lsi05G002210.1-proteinpolypeptide


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 67..83
scor