Lsi05G002210 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G002210
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 2991341 .. 2991592 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCGTCCATGAGATGGCCCCAATTCGAGATGGTCGGAGGGATTGGTCCTCTTTCTCTTGCGGGAAACGGAGAGAAAGGAAAGGGAAGCGGCAAATTCTTGGGAAAAGAGGAAGTGGGTGAAGAGAGGGAAGAGATTGGGATAGAAATTGGAATCGGAAGTGGAATTGGAGAAAAGGGAATGTGGGTTGGAGGAAGGGAAGAGGAGGAAGAGGAGGAGGAGGAGTTGGGAGATCAAAGAAGAGAGTAA

mRNA sequence

ATGAACTCGTCCATGAGATGGCCCCAATTCGAGATGGTCGGAGGGATTGGTCCTCTTTCTCTTGCGGGAAACGGAGAGAAAGGAAAGGGAAGCGGCAAATTCTTGGGAAAAGAGGAAGTGGGTGAAGAGAGGGAAGAGATTGGGATAGAAATTGGAATCGGAAGTGGAATTGGAGAAAAGGGAATGTGGGTTGGAGGAAGGGAAGAGGAGGAAGAGGAGGAGGAGGAGTTGGGAGATCAAAGAAGAGAGTAA

Coding sequence (CDS)

ATGAACTCGTCCATGAGATGGCCCCAATTCGAGATGGTCGGAGGGATTGGTCCTCTTTCTCTTGCGGGAAACGGAGAGAAAGGAAAGGGAAGCGGCAAATTCTTGGGAAAAGAGGAAGTGGGTGAAGAGAGGGAAGAGATTGGGATAGAAATTGGAATCGGAAGTGGAATTGGAGAAAAGGGAATGTGGGTTGGAGGAAGGGAAGAGGAGGAAGAGGAGGAGGAGGAGTTGGGAGATCAAAGAAGAGAGTAA

Protein sequence

MNSSMRWPQFEMVGGIGPLSLAGNGEKGKGSGKFLGKEEVGEEREEIGIEIGIGSGIGEKGMWVGGREEEEEEEEELGDQRRE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G002210.1Lsi05G002210.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 67..83
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G002210Cla013081Watermelon (97103) v1lsiwmB361
Lsi05G002210ClCG05G010120Watermelon (Charleston Gray)lsiwcgB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G002210Watermelon (97103) v2lsiwmbB326
Lsi05G002210Watermelon (97103) v2lsiwmbB317
Lsi05G002210Watermelon (97103) v2lsiwmbB329
Lsi05G002210Wax gourdlsiwgoB431
Lsi05G002210Wax gourdlsiwgoB468
Lsi05G002210Bottle gourd (USVL1VR-Ls)lsilsiB080
Lsi05G002210Bottle gourd (USVL1VR-Ls)lsilsiB132
Lsi05G002210Cucumber (Gy14) v1cgylsiB369
Lsi05G002210Cucumber (Gy14) v1cgylsiB404
Lsi05G002210Cucurbita maxima (Rimu)cmalsiB127
Lsi05G002210Cucurbita maxima (Rimu)cmalsiB316
Lsi05G002210Cucurbita maxima (Rimu)cmalsiB493
Lsi05G002210Cucurbita maxima (Rimu)cmalsiB690
Lsi05G002210Cucurbita moschata (Rifu)cmolsiB116
Lsi05G002210Cucurbita moschata (Rifu)cmolsiB304
Lsi05G002210Cucurbita moschata (Rifu)cmolsiB478
Lsi05G002210Cucurbita moschata (Rifu)cmolsiB683
Lsi05G002210Cucurbita pepo (Zucchini)cpelsiB177
Lsi05G002210Cucurbita pepo (Zucchini)cpelsiB369
Lsi05G002210Wild cucumber (PI 183967)cpilsiB209
Lsi05G002210Wild cucumber (PI 183967)cpilsiB541
Lsi05G002210Cucumber (Chinese Long) v2culsiB211
Lsi05G002210Cucumber (Chinese Long) v2culsiB527
Lsi05G002210Melon (DHL92) v3.5.1lsimeB346
Lsi05G002210Melon (DHL92) v3.5.1lsimeB368
Lsi05G002210Melon (DHL92) v3.5.1lsimeB388
Lsi05G002210Watermelon (Charleston Gray)lsiwcgB330
Lsi05G002210Watermelon (97103) v1lsiwmB380
Lsi05G002210Cucumber (Gy14) v2cgyblsiB198
Lsi05G002210Cucumber (Gy14) v2cgyblsiB496
Lsi05G002210Melon (DHL92) v3.6.1lsimedB363
Lsi05G002210Melon (DHL92) v3.6.1lsimedB384
Lsi05G002210Melon (DHL92) v3.6.1lsimedB409
Lsi05G002210Silver-seed gourdcarlsiB346
Lsi05G002210Silver-seed gourdcarlsiB737
Lsi05G002210Cucumber (Chinese Long) v3cuclsiB230
Lsi05G002210Cucumber (Chinese Long) v3cuclsiB562