Lsi04G014030.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G014030.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	17.6 kDa class II heat shock protein
Location	chr04 : 21789519 .. 21789989 (+)
Sequence length	471

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCAGAATCATGGGCCTAGACTCCCCAATCTTCTCCACTCTCCAGCACGTGATGGACCTCGCTGACGAGGCGGACAAGTCGTTCAGCGCCCCGACTCGGACCTACGTTCGGGACGCCAAGGCCATGGCGGCCACTCCGGCCGACGTCAAGGAGTATCCGAATTCTTACGTTTTCGTCGTCGACATGCCGGGACTGAAGGTCGGCGACATCAAGGTTCAAGTTGAGGATGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAGGGAGCTAAGTATGTGAGGATGGAGAGGAGAGTTGGCAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATCTCGGCGGTTTGTCAGGATGGCGTGCTCACTGTGACAGTCCAAAAGTTGCCACCACCTGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

mRNA sequence

ATGGATCTCAGAATCATGGGCCTAGACTCCCCAATCTTCTCCACTCTCCAGCACGTGATGGACCTCGCTGACGAGGCGGACAAGTCGTTCAGCGCCCCGACTCGGACCTACGTTCGGGACGCCAAGGCCATGGCGGCCACTCCGGCCGACGTCAAGGAGTATCCGAATTCTTACGTTTTCGTCGTCGACATGCCGGGACTGAAGGTCGGCGACATCAAGGTTCAAGTTGAGGATGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAGGGAGCTAAGTATGTGAGGATGGAGAGGAGAGTTGGCAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATCTCGGCGGTTTGTCAGGATGGCGTGCTCACTGTGACAGTCCAAAAGTTGCCACCACCTGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Coding sequence (CDS)

ATGGATCTCAGAATCATGGGCCTAGACTCCCCAATCTTCTCCACTCTCCAGCACGTGATGGACCTCGCTGACGAGGCGGACAAGTCGTTCAGCGCCCCGACTCGGACCTACGTTCGGGACGCCAAGGCCATGGCGGCCACTCCGGCCGACGTCAAGGAGTATCCGAATTCTTACGTTTTCGTCGTCGACATGCCGGGACTGAAGGTCGGCGACATCAAGGTTCAAGTTGAGGATGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAGGGAGCTAAGTATGTGAGGATGGAGAGGAGAGTTGGCAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATCTCGGCGGTTTGTCAGGATGGCGTGCTCACTGTGACAGTCCAAAAGTTGCCACCACCTGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Protein sequence

MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN

Homology

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BLAST of Lsi04G014030.1 vs. Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.6e-66
Identity = 126/158 (79.75%), Postives = 146/158 (92.41%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEA---DKSFSAPTRTYVRDAKAMAATPADVKEYPNS 60
           MD R+MGL+SP+F TLQH+MD++++    +K+ +APT +YVRDAKAMAATPADVKEYPNS
Sbjct: 1   MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNS 60

Query: 61  YVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPE 120
           YVF +DMPGLK GDIKVQVEDDN+LLI GERKR+EEKEGAKY+RMERRVGKLMRKFVLPE
Sbjct: 61  YVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPE 120

Query: 121 NANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           NANTDAISAVCQDGVL+VTVQKLPPPEPKKP+ ++VKV
Sbjct: 121 NANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKV 158

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BLAST of Lsi04G014030.1 vs. Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.0e-65
Identity = 128/156 (82.05%), Postives = 142/156 (91.03%), Query Frame = 1


Query: 1   MDLRIMGLDS-PIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYV 60
           MDLR++G+D+ P+F TL H+M+ A E   S +AP++ YVRDAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLLGIDNTPLFHTLHHMMEAAGE--DSVNAPSKIYVRDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA 120
           FVVDMPGLK GDIKVQVE+DNVLLISGERKREEEKEGAK++RMERRVGK MRKF LPENA
Sbjct: 61  FVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENA 120

Query: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           NTDAISAVCQDGVLTVTVQKLPPPEPKKPK +EVKV
Sbjct: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKV 154

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BLAST of Lsi04G014030.1 vs. Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-63
Identity = 121/151 (80.13%), Postives = 139/151 (92.05%), Query Frame = 1


Query: 6   MGLDSPIFSTLQHVMDLADEA-DKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDM 65
           M LDSP+F+TL H+MDL D+  +K+ +APTRTYVRDAKAMAATPADVKE+PNSYVF+VDM
Sbjct: 1   MDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDM 60

Query: 66  PGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANTDAI 125
           PG+K GDIKVQVED+NVLLISGERKREEEKEG KY++MERR+GKLMRKFVLPENAN +AI
Sbjct: 61  PGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAI 120

Query: 126 SAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           SA+ QDGVLTVTV KLPPPEPKKPK ++VKV
Sbjct: 121 SAISQDGVLTVTVNKLPPPEPKKPKTIQVKV 151

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BLAST of Lsi04G014030.1 vs. Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.1e-59
Identity = 118/157 (75.16%), Postives = 136/157 (86.62%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLA-DEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYV 60
           MDLR+MG D P+F    H+MD A D+   + SAP+RT++ DAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLMGFDHPLF---HHIMDYAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPEN 120
           F++DMPGLK GDIKVQV+ DNVL ISGERKRE EEKEGAKYVRMERRVGKLMRKFVLPEN
Sbjct: 61  FIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPEN 120

Query: 121 ANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           AN + I+AVCQDGVLTVTV+ +PPPEPKKP+ +EVK+
Sbjct: 121 ANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154

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BLAST of Lsi04G014030.1 vs. Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 8.9e-54
Identity = 109/155 (70.32%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 5   IMGLDSPIFSTLQHVMDLADE---ADKSF-SAPTRTYVRDAKAMAATPADVKEYPNSYVF 64
           +MG D P+   L ++++  D+    +KS  S P+R YVRDA+AMAATPADVKE PNSYVF
Sbjct: 6   LMGFD-PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVF 65

Query: 65  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 124
           +VDMPGLK GDIKVQVE DNVL+ISG+R REEEKEG KYVRMERR+GK M+KF LPE+AN
Sbjct: 66  IVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDAN 125

Query: 125 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           TD ISA+CQDGVLTVTV+KLPPPEPKKPK ++V+V
Sbjct: 126 TDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQV 159

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BLAST of Lsi04G014030.1 vs. TrEMBL
Match: H6TB44_CITLA (HSP17.4 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.9e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

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BLAST of Lsi04G014030.1 vs. TrEMBL
Match: A0A0A0L061_CUCSA (Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN=Csa_4G646340 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.0e-76
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

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BLAST of Lsi04G014030.1 vs. TrEMBL
Match: C9EIM5_9ROSA (CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-71
Identity = 138/155 (89.03%), Postives = 147/155 (94.84%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI GLDSP+FSTLQH+MD  +E DKSF+APTRTYVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 1   MDVRIAGLDSPLFSTLQHIMDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            +AISAVCQDGVLTVTVQKLPPPEPKKPK +EVK+
Sbjct: 121 VEAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKI 155

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BLAST of Lsi04G014030.1 vs. TrEMBL
Match: M5XMI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-71
Identity = 137/155 (88.39%), Postives = 147/155 (94.84%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI GLDSP+FSTLQH+MD  DE DKSF+APTRTYVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 66  MDVRIAGLDSPLFSTLQHIMDFTDEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 125

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLI+GERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 126 VVDMPGLKSGDIKVQVEDDNVLLITGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 185

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            +AISAVCQDGVLTVTV+KLPPPEPKKPK +EVK+
Sbjct: 186 VEAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKI 220

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BLAST of Lsi04G014030.1 vs. TrEMBL
Match: Q9XGS6_PRUDU (Cytosolic class II low molecular weight heat shock protein OS=Prunus dulcis GN=hsp17.5 PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.1e-70
Identity = 136/155 (87.74%), Postives = 146/155 (94.19%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI GLDSP+FSTLQH+MD  DE DKSF+APTRTYVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 1   MDVRIAGLDSPLFSTLQHIMDFTDEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLI+GERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLITGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            +AISAVCQDGVLTVTV+KLPPPEPKK K +EVK+
Sbjct: 121 VEAISAVCQDGVLTVTVEKLPPPEPKKSKTIEVKI 155

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BLAST of Lsi04G014030.1 vs. TAIR10
Match: AT5G12020.1 (AT5G12020.1 17.6 kDa class II heat shock protein)

HSP 1 Score: 191.0 bits (484), Expect = 5.4e-49
Identity = 98/148 (66.22%), Postives = 124/148 (83.78%), Query Frame = 1


Query: 11  PIFSTLQHVMDLADEA--DKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLK 70
           PI S L+ ++++ ++   +K+ + P+R Y+RDAKAMAATPADV E+PN+Y FVVDMPG+K
Sbjct: 7   PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIK 66

Query: 71  VGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAV 130
             +IKVQVE+DNVL++SGER+RE +E EG KYVRMERR+GK MRKF LPENA+ D ISAV
Sbjct: 67  GDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAV 126

Query: 131 CQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           C DGVL VTVQKLPPPEPKKPK ++V+V
Sbjct: 127 CHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

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BLAST of Lsi04G014030.1 vs. TAIR10
Match: AT5G12030.1 (AT5G12030.1 heat shock protein 17.6A)

HSP 1 Score: 178.3 bits (451), Expect = 3.6e-45
Identity = 88/147 (59.86%), Postives = 122/147 (82.99%), Query Frame = 1


Query: 11  PIFSTLQHVMDLADE-ADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKV 70
           PIFS L+ +++  +E  +K+ + P+R Y+RDAKAMAATPADV E+P++YVF VDMPG+K 
Sbjct: 9   PIFSILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKG 68

Query: 71  GDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAVC 130
            +I+VQ+E++NVL++SG+R+R+ +E EG K+VRMERR+GK MRKF LP+NA+ + ISA C
Sbjct: 69  DEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAAC 128

Query: 131 QDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            DGVL VT+ KLPPPEPKKPK ++V+V
Sbjct: 129 NDGVLKVTIPKLPPPEPKKPKTIQVQV 155

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BLAST of Lsi04G014030.1 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 55/118 (46.61%), Postives = 76/118 (64.41%), Query Frame = 1


Query: 39  RDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAK 98
           RD  A      D KE P ++VF  D+PGLK  ++KV+VED NVL ISGER +E E++  K
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDK 103

Query: 99  YVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           + R+ER  GK MR+F LPENA  + + A  ++GVLTV V K P    KKP++  + ++
Sbjct: 104 WHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP---EKKPQVKSIDIS 158

[Close]

BLAST of Lsi04G014030.1 vs. TAIR10
Match: AT1G54050.1 (AT1G54050.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 53/114 (46.49%), Postives = 85/114 (74.56%), Query Frame = 1


Query: 48  PADVKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKR--EEEKEGAKYVRME 107
           P D+ E P  Y+F +D+PG+   DI+V VE++  L+I  +G+RKR  +E +EG+KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 108 RRVGK-LMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           RR+ + L++KF LPE+A+  +++A  Q+GVLTV ++KL PP+P KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of Lsi04G014030.1 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 46/111 (41.44%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 43  AMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRM 102
           A++    D KE    +  ++D+PGLK  ++K++VE++ VL +SGERKREEEK+G ++ R+
Sbjct: 67  ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRV 126

Query: 103 ERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEV 154
           ER  GK  R+F LP+N + +++ A  ++GVLT+ + KL P + K P++V +
Sbjct: 127 ERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNI 177

[Close]

BLAST of Lsi04G014030.1 vs. NCBI nr
Match: gi|315932722|gb|ADU55791.1| (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 303.1 bits (775), Expect = 2.7e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Lsi04G014030.1 vs. NCBI nr
Match: gi|449447155|ref|XP_004141334.1| (PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 2.8e-76
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

[Close]

BLAST of Lsi04G014030.1 vs. NCBI nr
Match: gi|659103975|ref|XP_008452767.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-73
Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMGL+SPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 86  MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 145

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 146 VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKE-AKYVRMERRVGKLMRKFVLPENAN 205

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
            DAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 206 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 240

[Close]

BLAST of Lsi04G014030.1 vs. NCBI nr
Match: gi|657964030|ref|XP_008373637.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica])

HSP 1 Score: 276.9 bits (707), Expect = 2.1e-71
Identity = 137/155 (88.39%), Postives = 148/155 (95.48%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI G D+P+FSTLQH+MD+AD+A+KSF+APTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDIRIPGFDAPLFSTLQHIMDVADDAEKSFNAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLISGERKREEEKEG KYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGVKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            DAISAVCQDGVLTVTV+KLPPPEPKKPK +EVK+
Sbjct: 121 VDAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKI 155

[Close]

BLAST of Lsi04G014030.1 vs. NCBI nr
Match: gi|259123935|gb|ACV93250.1| (CII small heat shock protein 1 [Prunus salicina])

HSP 1 Score: 276.2 bits (705), Expect = 3.6e-71
Identity = 138/155 (89.03%), Postives = 147/155 (94.84%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI GLDSP+FSTLQH+MD  +E DKSF+APTRTYVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 1   MDVRIAGLDSPLFSTLQHIMDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            +AISAVCQDGVLTVTVQKLPPPEPKKPK +EVK+
Sbjct: 121 VEAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKI 155

The following BLAST results are available for this feature:

BLAST of Lsi04G014030.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP21_SOYBN	1.6e-66	79.75	17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1	[more]
HSP21_SOLPE	5.0e-65	82.05	17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP21_PEA	1.2e-63	80.13	17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1	[more]
HSP21_IPONI	4.1e-59	75.16	17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1	[more]
HSP21_HELAN	8.9e-54	70.32	17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1	[more]

BLAST of Lsi04G014030.1 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB44_CITLA	1.9e-79	100.00	HSP17.4 OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0L061_CUCSA	2.0e-76	96.15	Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN...	[more]
C9EIM5_9ROSA	2.5e-71	89.03	CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1	[more]
M5XMI8_PRUPE	2.5e-71	88.39	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1	[more]
Q9XGS6_PRUDU	2.1e-70	87.74	Cytosolic class II low molecular weight heat shock protein OS=Prunus dulcis GN=h...	[more]

BLAST of Lsi04G014030.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12020.1	5.4e-49	66.22	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	3.6e-45	59.86	heat shock protein 17.6A	[more]
AT5G59720.1	1.9e-22	46.61	heat shock protein 18.2	[more]
AT1G54050.1	1.2e-21	46.49	HSP20-like chaperones superfamily protein	[more]
AT4G10250.1	1.1e-20	41.44	HSP20-like chaperones superfamily protein	[more]

BLAST of Lsi04G014030.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932722\|gb\|ADU55791.1\|	2.7e-79	100.00	HSP17.4 [Citrullus lanatus]	[more]
gi\|449447155\|ref\|XP_004141334.1\|	2.8e-76	96.15	PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus]	[more]
gi\|659103975\|ref\|XP_008452767.1\|	1.3e-73	94.87	PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo]	[more]
gi\|657964030\|ref\|XP_008373637.1\|	2.1e-71	88.39	PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica]	[more]
gi\|259123935\|gb\|ACV93250.1\|	3.6e-71	89.03	CII small heat shock protein 1 [Prunus salicina]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008978	HSP20-like_chaperone
IPR002068	A-crystallin/Hsp20_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi04G014030	Lsi04G014030	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G014030.1.CDS.1	Lsi04G014030.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi04G014030.1	Lsi04G014030.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 score: 1.1
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 50..139 score: 2
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 10..154 score: 1.8
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 15..150 score: 5.23
None	No IPR available	PANTHER	PTHR11527:SF93	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 1..155 score: 1.2