Lsi04G014030 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G014030
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	17.6 kDa class II heat shock protein
Location	chr04 : 21789519 .. 21789989 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCAGAATCATGGGCCTAGACTCCCCAATCTTCTCCACTCTCCAGCACGTGATGGACCTCGCTGACGAGGCGGACAAGTCGTTCAGCGCCCCGACTCGGACCTACGTTCGGGACGCCAAGGCCATGGCGGCCACTCCGGCCGACGTCAAGGAGTATCCGAATTCTTACGTTTTCGTCGTCGACATGCCGGGACTGAAGGTCGGCGACATCAAGGTTCAAGTTGAGGATGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAGGGAGCTAAGTATGTGAGGATGGAGAGGAGAGTTGGCAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATCTCGGCGGTTTGTCAGGATGGCGTGCTCACTGTGACAGTCCAAAAGTTGCCACCACCTGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

mRNA sequence

ATGGATCTCAGAATCATGGGCCTAGACTCCCCAATCTTCTCCACTCTCCAGCACGTGATGGACCTCGCTGACGAGGCGGACAAGTCGTTCAGCGCCCCGACTCGGACCTACGTTCGGGACGCCAAGGCCATGGCGGCCACTCCGGCCGACGTCAAGGAGTATCCGAATTCTTACGTTTTCGTCGTCGACATGCCGGGACTGAAGGTCGGCGACATCAAGGTTCAAGTTGAGGATGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAGGGAGCTAAGTATGTGAGGATGGAGAGGAGAGTTGGCAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATCTCGGCGGTTTGTCAGGATGGCGTGCTCACTGTGACAGTCCAAAAGTTGCCACCACCTGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Coding sequence (CDS)

ATGGATCTCAGAATCATGGGCCTAGACTCCCCAATCTTCTCCACTCTCCAGCACGTGATGGACCTCGCTGACGAGGCGGACAAGTCGTTCAGCGCCCCGACTCGGACCTACGTTCGGGACGCCAAGGCCATGGCGGCCACTCCGGCCGACGTCAAGGAGTATCCGAATTCTTACGTTTTCGTCGTCGACATGCCGGGACTGAAGGTCGGCGACATCAAGGTTCAAGTTGAGGATGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAGGGAGCTAAGTATGTGAGGATGGAGAGGAGAGTTGGCAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATCTCGGCGGTTTGTCAGGATGGCGTGCTCACTGTGACAGTCCAAAAGTTGCCACCACCTGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Protein sequence

MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN

Homology

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BLAST of Lsi04G014030 vs. Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.6e-66
Identity = 126/158 (79.75%), Postives = 146/158 (92.41%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEA---DKSFSAPTRTYVRDAKAMAATPADVKEYPNS 60
           MD R+MGL+SP+F TLQH+MD++++    +K+ +APT +YVRDAKAMAATPADVKEYPNS
Sbjct: 1   MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNS 60

Query: 61  YVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPE 120
           YVF +DMPGLK GDIKVQVEDDN+LLI GERKR+EEKEGAKY+RMERRVGKLMRKFVLPE
Sbjct: 61  YVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPE 120

Query: 121 NANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           NANTDAISAVCQDGVL+VTVQKLPPPEPKKP+ ++VKV
Sbjct: 121 NANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKV 158

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BLAST of Lsi04G014030 vs. Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.0e-65
Identity = 128/156 (82.05%), Postives = 142/156 (91.03%), Query Frame = 1


Query: 1   MDLRIMGLDS-PIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYV 60
           MDLR++G+D+ P+F TL H+M+ A E   S +AP++ YVRDAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLLGIDNTPLFHTLHHMMEAAGE--DSVNAPSKIYVRDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA 120
           FVVDMPGLK GDIKVQVE+DNVLLISGERKREEEKEGAK++RMERRVGK MRKF LPENA
Sbjct: 61  FVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENA 120

Query: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           NTDAISAVCQDGVLTVTVQKLPPPEPKKPK +EVKV
Sbjct: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKV 154

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BLAST of Lsi04G014030 vs. Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-63
Identity = 121/151 (80.13%), Postives = 139/151 (92.05%), Query Frame = 1


Query: 6   MGLDSPIFSTLQHVMDLADEA-DKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDM 65
           M LDSP+F+TL H+MDL D+  +K+ +APTRTYVRDAKAMAATPADVKE+PNSYVF+VDM
Sbjct: 1   MDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDM 60

Query: 66  PGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANTDAI 125
           PG+K GDIKVQVED+NVLLISGERKREEEKEG KY++MERR+GKLMRKFVLPENAN +AI
Sbjct: 61  PGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAI 120

Query: 126 SAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           SA+ QDGVLTVTV KLPPPEPKKPK ++VKV
Sbjct: 121 SAISQDGVLTVTVNKLPPPEPKKPKTIQVKV 151

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BLAST of Lsi04G014030 vs. Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.1e-59
Identity = 118/157 (75.16%), Postives = 136/157 (86.62%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLA-DEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYV 60
           MDLR+MG D P+F    H+MD A D+   + SAP+RT++ DAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLMGFDHPLF---HHIMDYAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPEN 120
           F++DMPGLK GDIKVQV+ DNVL ISGERKRE EEKEGAKYVRMERRVGKLMRKFVLPEN
Sbjct: 61  FIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPEN 120

Query: 121 ANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           AN + I+AVCQDGVLTVTV+ +PPPEPKKP+ +EVK+
Sbjct: 121 ANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154

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BLAST of Lsi04G014030 vs. Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 8.9e-54
Identity = 109/155 (70.32%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 5   IMGLDSPIFSTLQHVMDLADE---ADKSF-SAPTRTYVRDAKAMAATPADVKEYPNSYVF 64
           +MG D P+   L ++++  D+    +KS  S P+R YVRDA+AMAATPADVKE PNSYVF
Sbjct: 6   LMGFD-PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVF 65

Query: 65  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 124
           +VDMPGLK GDIKVQVE DNVL+ISG+R REEEKEG KYVRMERR+GK M+KF LPE+AN
Sbjct: 66  IVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDAN 125

Query: 125 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           TD ISA+CQDGVLTVTV+KLPPPEPKKPK ++V+V
Sbjct: 126 TDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQV 159

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BLAST of Lsi04G014030 vs. TrEMBL
Match: H6TB44_CITLA (HSP17.4 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.9e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

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BLAST of Lsi04G014030 vs. TrEMBL
Match: A0A0A0L061_CUCSA (Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN=Csa_4G646340 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.0e-76
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

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BLAST of Lsi04G014030 vs. TrEMBL
Match: C9EIM5_9ROSA (CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-71
Identity = 138/155 (89.03%), Postives = 147/155 (94.84%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI GLDSP+FSTLQH+MD  +E DKSF+APTRTYVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 1   MDVRIAGLDSPLFSTLQHIMDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            +AISAVCQDGVLTVTVQKLPPPEPKKPK +EVK+
Sbjct: 121 VEAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKI 155

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BLAST of Lsi04G014030 vs. TrEMBL
Match: M5XMI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-71
Identity = 137/155 (88.39%), Postives = 147/155 (94.84%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI GLDSP+FSTLQH+MD  DE DKSF+APTRTYVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 66  MDVRIAGLDSPLFSTLQHIMDFTDEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 125

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLI+GERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 126 VVDMPGLKSGDIKVQVEDDNVLLITGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 185

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            +AISAVCQDGVLTVTV+KLPPPEPKKPK +EVK+
Sbjct: 186 VEAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKI 220

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BLAST of Lsi04G014030 vs. TrEMBL
Match: Q9XGS6_PRUDU (Cytosolic class II low molecular weight heat shock protein OS=Prunus dulcis GN=hsp17.5 PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.1e-70
Identity = 136/155 (87.74%), Postives = 146/155 (94.19%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI GLDSP+FSTLQH+MD  DE DKSF+APTRTYVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 1   MDVRIAGLDSPLFSTLQHIMDFTDEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLI+GERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLITGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            +AISAVCQDGVLTVTV+KLPPPEPKK K +EVK+
Sbjct: 121 VEAISAVCQDGVLTVTVEKLPPPEPKKSKTIEVKI 155

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BLAST of Lsi04G014030 vs. TAIR10
Match: AT5G12020.1 (AT5G12020.1 17.6 kDa class II heat shock protein)

HSP 1 Score: 191.0 bits (484), Expect = 5.4e-49
Identity = 98/148 (66.22%), Postives = 124/148 (83.78%), Query Frame = 1


Query: 11  PIFSTLQHVMDLADEA--DKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLK 70
           PI S L+ ++++ ++   +K+ + P+R Y+RDAKAMAATPADV E+PN+Y FVVDMPG+K
Sbjct: 7   PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIK 66

Query: 71  VGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAV 130
             +IKVQVE+DNVL++SGER+RE +E EG KYVRMERR+GK MRKF LPENA+ D ISAV
Sbjct: 67  GDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAV 126

Query: 131 CQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           C DGVL VTVQKLPPPEPKKPK ++V+V
Sbjct: 127 CHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

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BLAST of Lsi04G014030 vs. TAIR10
Match: AT5G12030.1 (AT5G12030.1 heat shock protein 17.6A)

HSP 1 Score: 178.3 bits (451), Expect = 3.6e-45
Identity = 88/147 (59.86%), Postives = 122/147 (82.99%), Query Frame = 1


Query: 11  PIFSTLQHVMDLADE-ADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKV 70
           PIFS L+ +++  +E  +K+ + P+R Y+RDAKAMAATPADV E+P++YVF VDMPG+K 
Sbjct: 9   PIFSILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKG 68

Query: 71  GDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAVC 130
            +I+VQ+E++NVL++SG+R+R+ +E EG K+VRMERR+GK MRKF LP+NA+ + ISA C
Sbjct: 69  DEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAAC 128

Query: 131 QDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            DGVL VT+ KLPPPEPKKPK ++V+V
Sbjct: 129 NDGVLKVTIPKLPPPEPKKPKTIQVQV 155

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BLAST of Lsi04G014030 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 55/118 (46.61%), Postives = 76/118 (64.41%), Query Frame = 1


Query: 39  RDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAK 98
           RD  A      D KE P ++VF  D+PGLK  ++KV+VED NVL ISGER +E E++  K
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDK 103

Query: 99  YVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           + R+ER  GK MR+F LPENA  + + A  ++GVLTV V K P    KKP++  + ++
Sbjct: 104 WHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP---EKKPQVKSIDIS 158

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BLAST of Lsi04G014030 vs. TAIR10
Match: AT1G54050.1 (AT1G54050.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 53/114 (46.49%), Postives = 85/114 (74.56%), Query Frame = 1


Query: 48  PADVKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKR--EEEKEGAKYVRME 107
           P D+ E P  Y+F +D+PG+   DI+V VE++  L+I  +G+RKR  +E +EG+KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 108 RRVGK-LMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           RR+ + L++KF LPE+A+  +++A  Q+GVLTV ++KL PP+P KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of Lsi04G014030 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 46/111 (41.44%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 43  AMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRM 102
           A++    D KE    +  ++D+PGLK  ++K++VE++ VL +SGERKREEEK+G ++ R+
Sbjct: 67  ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRV 126

Query: 103 ERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEV 154
           ER  GK  R+F LP+N + +++ A  ++GVLT+ + KL P + K P++V +
Sbjct: 127 ERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNI 177

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BLAST of Lsi04G014030 vs. NCBI nr
Match: gi|315932722|gb|ADU55791.1| (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 303.1 bits (775), Expect = 2.7e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

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BLAST of Lsi04G014030 vs. NCBI nr
Match: gi|449447155|ref|XP_004141334.1| (PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 2.8e-76
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

[Close]

BLAST of Lsi04G014030 vs. NCBI nr
Match: gi|659103975|ref|XP_008452767.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-73
Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMGL+SPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 86  MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 145

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 146 VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKE-AKYVRMERRVGKLMRKFVLPENAN 205

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
            DAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 206 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 240

[Close]

BLAST of Lsi04G014030 vs. NCBI nr
Match: gi|657964030|ref|XP_008373637.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica])

HSP 1 Score: 276.9 bits (707), Expect = 2.1e-71
Identity = 137/155 (88.39%), Postives = 148/155 (95.48%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI G D+P+FSTLQH+MD+AD+A+KSF+APTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDIRIPGFDAPLFSTLQHIMDVADDAEKSFNAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLISGERKREEEKEG KYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGVKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            DAISAVCQDGVLTVTV+KLPPPEPKKPK +EVK+
Sbjct: 121 VDAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKI 155

[Close]

BLAST of Lsi04G014030 vs. NCBI nr
Match: gi|259123935|gb|ACV93250.1| (CII small heat shock protein 1 [Prunus salicina])

HSP 1 Score: 276.2 bits (705), Expect = 3.6e-71
Identity = 138/155 (89.03%), Postives = 147/155 (94.84%), Query Frame = 1


Query: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI GLDSP+FSTLQH+MD  +E DKSF+APTRTYVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 1   MDVRIAGLDSPLFSTLQHIMDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            +AISAVCQDGVLTVTVQKLPPPEPKKPK +EVK+
Sbjct: 121 VEAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKI 155

The following BLAST results are available for this feature:

BLAST of Lsi04G014030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP21_SOYBN	1.6e-66	79.75	17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1	[more]
HSP21_SOLPE	5.0e-65	82.05	17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP21_PEA	1.2e-63	80.13	17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1	[more]
HSP21_IPONI	4.1e-59	75.16	17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1	[more]
HSP21_HELAN	8.9e-54	70.32	17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1	[more]

BLAST of Lsi04G014030 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB44_CITLA	1.9e-79	100.00	HSP17.4 OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0L061_CUCSA	2.0e-76	96.15	Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN...	[more]
C9EIM5_9ROSA	2.5e-71	89.03	CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1	[more]
M5XMI8_PRUPE	2.5e-71	88.39	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1	[more]
Q9XGS6_PRUDU	2.1e-70	87.74	Cytosolic class II low molecular weight heat shock protein OS=Prunus dulcis GN=h...	[more]

BLAST of Lsi04G014030 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12020.1	5.4e-49	66.22	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	3.6e-45	59.86	heat shock protein 17.6A	[more]
AT5G59720.1	1.9e-22	46.61	heat shock protein 18.2	[more]
AT1G54050.1	1.2e-21	46.49	HSP20-like chaperones superfamily protein	[more]
AT4G10250.1	1.1e-20	41.44	HSP20-like chaperones superfamily protein	[more]

BLAST of Lsi04G014030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932722\|gb\|ADU55791.1\|	2.7e-79	100.00	HSP17.4 [Citrullus lanatus]	[more]
gi\|449447155\|ref\|XP_004141334.1\|	2.8e-76	96.15	PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus]	[more]
gi\|659103975\|ref\|XP_008452767.1\|	1.3e-73	94.87	PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo]	[more]
gi\|657964030\|ref\|XP_008373637.1\|	2.1e-71	88.39	PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica]	[more]
gi\|259123935\|gb\|ACV93250.1\|	3.6e-71	89.03	CII small heat shock protein 1 [Prunus salicina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008978	HSP20-like_chaperone
IPR002068	A-crystallin/Hsp20_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G014030.1	Lsi04G014030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 score: 1.1
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 50..139 score: 2
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 10..154 score: 1.8
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 15..150 score: 5.23
None	No IPR available	PANTHER	PTHR11527:SF93	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 1..155 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G014030	Cucurbita pepo (Zucchini)	cpelsiB117
Lsi04G014030	Cucurbita pepo (Zucchini)	cpelsiB295
Lsi04G014030	Cucurbita pepo (Zucchini)	cpelsiB462
Lsi04G014030	Cucurbita pepo (Zucchini)	cpelsiB550
Lsi04G014030	Cucurbita pepo (Zucchini)	cpelsiB638
Lsi04G014030	Wild cucumber (PI 183967)	cpilsiB056
Lsi04G014030	Wild cucumber (PI 183967)	cpilsiB291
Lsi04G014030	Wild cucumber (PI 183967)	cpilsiB539
Lsi04G014030	Cucumber (Chinese Long) v2	culsiB055
Lsi04G014030	Cucumber (Chinese Long) v2	culsiB291
Lsi04G014030	Cucumber (Chinese Long) v2	culsiB525
Lsi04G014030	Melon (DHL92) v3.5.1	lsimeB291
Lsi04G014030	Melon (DHL92) v3.5.1	lsimeB296
Lsi04G014030	Melon (DHL92) v3.5.1	lsimeB314
Lsi04G014030	Watermelon (Charleston Gray)	lsiwcgB255
Lsi04G014030	Watermelon (Charleston Gray)	lsiwcgB278
Lsi04G014030	Watermelon (Charleston Gray)	lsiwcgB289
Lsi04G014030	Watermelon (97103) v1	lsiwmB286
Lsi04G014030	Watermelon (97103) v1	lsiwmB300
Lsi04G014030	Watermelon (97103) v1	lsiwmB317
Lsi04G014030	Cucumber (Gy14) v2	cgyblsiB050
Lsi04G014030	Cucumber (Gy14) v2	cgyblsiB269
Lsi04G014030	Cucumber (Gy14) v2	cgyblsiB492
Lsi04G014030	Melon (DHL92) v3.6.1	lsimedB305
Lsi04G014030	Melon (DHL92) v3.6.1	lsimedB310
Lsi04G014030	Melon (DHL92) v3.6.1	lsimedB330
Lsi04G014030	Silver-seed gourd	carlsiB085
Lsi04G014030	Silver-seed gourd	carlsiB576
Lsi04G014030	Silver-seed gourd	carlsiB708
Lsi04G014030	Cucumber (Chinese Long) v3	cuclsiB062
Lsi04G014030	Cucumber (Chinese Long) v3	cuclsiB312
Lsi04G014030	Cucumber (Chinese Long) v3	cuclsiB557
Lsi04G014030	Watermelon (97103) v2	lsiwmbB290
Lsi04G014030	Watermelon (97103) v2	lsiwmbB279
Lsi04G014030	Watermelon (97103) v2	lsiwmbB312
Lsi04G014030	Wax gourd	lsiwgoB394
Lsi04G014030	Wax gourd	lsiwgoB401
Lsi04G014030	Wax gourd	lsiwgoB409
Lsi04G014030	Bottle gourd (USVL1VR-Ls)	lsilsiB100
Lsi04G014030	Bottle gourd (USVL1VR-Ls)	lsilsiB141
Lsi04G014030	Cucumber (Gy14) v1	cgylsiB483
Lsi04G014030	Cucumber (Gy14) v1	cgylsiB578
Lsi04G014030	Cucurbita maxima (Rimu)	cmalsiB024
Lsi04G014030	Cucurbita maxima (Rimu)	cmalsiB060
Lsi04G014030	Cucurbita maxima (Rimu)	cmalsiB124
Lsi04G014030	Cucurbita maxima (Rimu)	cmalsiB174
Lsi04G014030	Cucurbita maxima (Rimu)	cmalsiB424
Lsi04G014030	Cucurbita moschata (Rifu)	cmolsiB012
Lsi04G014030	Cucurbita moschata (Rifu)	cmolsiB047
Lsi04G014030	Cucurbita moschata (Rifu)	cmolsiB112
Lsi04G014030	Cucurbita moschata (Rifu)	cmolsiB166
Lsi04G014030	Cucurbita moschata (Rifu)	cmolsiB422